Snake venom disintegrins: Evolution of structure and function

Toxicon

Volumn 45, Issue 8, 2005, Pages 1063-1074

  Calvete, Juan J ^a   Marcinkiewicz, Cezary ^b   Monleón, Daniel ^c   Esteve, Vicent ^a,c   Celda, Bernardo ^c   Juárez, Paula ^a   Sanz, Libia ^a  

^a INSTITUTO DE BIOMEDICINA DE VALENCIA   (Spain)

^b Temple University   (United States)

^c UNIVERSITY OF VALENCIA   (Spain)

Author keywords

Disintegrins; Disulfide bond engineering; Evolution of protein structure; Integrin antagonists; Snake venom proteins; Structure function correlations

Indexed keywords

DISINTEGRIN; INTEGRIN RECEPTOR; PROTEIN SUBUNIT; SNAKE VENOM; VERY LATE ACTIVATION ANTIGEN 1; VIPER VENOM;

CARBOXY TERMINAL SEQUENCE; CORRELATION ANALYSIS; DISULFIDE BOND; DNA SEQUENCE; DYNAMICS; GENE DUPLICATION; MOLECULAR MODEL; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN CONFORMATION; PROTEIN FUNCTION; PROTEIN STRUCTURE; REVIEW; STRUCTURE ACTIVITY RELATION;

EID: 19544381539     PISSN: 00410101     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.toxicon.2005.02.024     Document Type: Article

References (69)

1. 1 integrins Biochemistry 43 2004 1639 1647
2. S. Bilgrami, S. Tomar, S. Yadav, P. Kaur, J. Kumar, T. Jabeen, S. Sharma, and T.P. Sinhg Crystal structure of schistatin, a disintegrin homodimer from saw-scaled viper (Echis carinatus) at 2.5 Å resolution J. Mol. Biol. 341 2004 829 837
3. J.B. Bjarnason, and J.W. Fox Hemorrhagic metalloproteinases from snake venoms Pharmac. Ther. 62 1994 325 372
4. A.S.V. Burgen, G.C.K. Roberts, and J. Freeney Binding of flexible ligands to macromolecules Nature 253 1975 753 755
5. J.J. Calvete, W. Schäfer, T. Soszka, W. Lu, J.J. Cook, B.A. Jameson, and S. Niewiarowski Identification of the disulfide bond pattern in albolabrin, an RGD-containing peptide from the venom of Trimeresurus albolabris: significance for the expression of platelet aggregation inhibitory activity Biochemistry 30 1991 5225 5229
6. J.J. Calvete, M.P. Moreno-Murciano, L. Sanz, M. Jürgens, M. Schrader, M. Raida, D.C. Benjamin, and J.W. Fox The disulfide bond pattern of catrocollastatin C, a disintegrin/cysteine-rich protein isolated from Crotalus atrox venom Protein Sci. 9 2000 1365 1373
7. 1 antagonist from Eristocophis macmahoni venom Biochem. J. 345 2000 573 581
8. 1 integrins Biochemistry 41 2002 2014 2021
9. J.J. Calvete, M.P. Moreno-Murciano, R.D.G. Theakston, D.G. Kisiel, and C. Marcinkiewicz Snake venom disintegrins: novel dimeric disintegrins and structural diversification by disulfide bond engineering Biochem. J. 372 2003 725 734
10. Y. Chen, A.K. Suri, D. Kominos, G. Sanyal, A.M. Naytor, S.M. Pitzenberger, V.M. Garsky, R.M. Levy, and J. Baum Three-dimensional structure of echistatin and dynamics of the active site J. Biomol. NMR 4 1994 307 324
11. T.F. Duda jr, and S.R. Palumbi Developmental shifts and species selection in gastropods Proc. Natl Acad. Sci. USA 96 1999 6820 6823
12. 3 integrin J. Med. Chem. 46 2003 5316 5325
13. J.W. Fox, and C. Long The ADAMs/MDC family of proteins and their relationships to the snake venom metalloproteinases G.S. Bailey Snake Venom Enzymes 1998 Alaken Press Ft. Collins, Co, USA 151 178
14. B.G. Fry Structure-function properties of venom components from Australian elapids Toxicon 37 1999 11 32
15. Y. Fujii, D. Okuda, Z. Fujimoto, K. Horii, T. Morita, and H. Mizuno Crystal structure of trimestatin, a disintegrin containing a cell adhesion recognition motif RGD J. Mol. Biol. 332 2003 1115 1122
16. R.J. Gould, M.A. Polokoff, P.A. Friedman, T-F. Huang, J.C. Holt, J.J. Cook, and S. Niewiarowski Disintegrins: a family of integrin inhibitory proteins from viper venoms Proc. Soc. Exp. Biol. Med. 195 1990 168 171
17. L.A. Hite, J.D. Shannon, J.B. Bjarnason, and J.W. Fox Sequence of a cDNA clone encoding the zinc metalloproteinase hemorrhagic toxin e from Crotalus atrox: evidence for signal, zymogen, and disintegrin-like structures Biochemistry 31 1992 6203 6211
18. L.A. Hite, L-G. Jia, J.B. Bjarnason, and J.W. Fox cDNA sequences of four snake venom metalloproteinases: structure, classification, and their relationship to mammalian reproductive proteins Arch. Biochem. Biophys. 308 1994 182 191
19. S.-Y. Hong, Y.-D. Sohn, K.-H. Chung, and D.-S. Kim Structural and functional significance of disulfide bonds in saxatilin, a 7.7 kDa disintegrin Biochem. Biophys. Res. Commun. 293 2002 530 536
20. T.-F. Huang, J.C. Holt, H. Lukasiewicz, and S. Niewiarowski Trigramin. A low molecular weight peptide inhibiting fibrinogen interaction with platelet receptors expressed on glycoprotein IIb-IIIa complex J. Biol. Chem. 262 1987 16157 16163
21. R.O. Hynes Integrins: bidirectional, allosteric signaling machines Cell 110 2002 673 687
22. 2I domain J. Biol. Chem. 274 1999 3513 3521
23. L-G. Jia, K-i Shimokawa, J.B. Bjarnason, and J.W. Fox Snake venom metalloproteinases: structure, function and relationship to the ADAMs family of proteins Toxicon 34 1996 1269 1276
24. L.-G. Jia, X.-M. Wang, J.D. Shannon, J.B. Bjarnason, and J.W. Fox Function of disintegrin-like/cysteine-rich domains of atrolysin A. Inhibition of platelet aggregation by recombinant protein and peptide antagonists J. Biol. Chem. 272 1997 13094 13102
25. L.-G. Jia, X.-M. Wang, J.D. Shannon, J.B. Bjarnason, and J.W. Fox Inhibition of platelet aggregation by the recombinant cysteine-rich domain of the hemorrhagic snake venom metalloproteinase, atrolysin A Arch. Biochem. Biophys. 373 2000 281 286
26. P. Juárez, L. Sanz, and J.J. Calvete Snake venomics: characterization of protein families in Sistrurus barbouri venom by cysteine mapping, N-terminal sequencing, and MS/MS analysis Proteomics 4 2004 327 338
27. 1 integrin by the snake venom metalloprotease jararhagin Biochem. J. 320 1995 635 641
28. A.S. Kamiguti, P. Gallagher, C. Marcinkiewicz, R.D.G. Theakston, M. Zuzel, and J.W. Fox Identification of sites in the cysteine-rich domain of the class P-III snake venom metalloproteinases responsible for inhibition of platelet function FEBS Lett. 549 2003 129 134
29. R.M. Kini, and H.J. Evans Structural domains in venom proteins: evidence that metalloproteinases and nonenzymatic platelet aggregation inhibitors (disintegrins) from snake venoms are derived by proteolysis from a common precursor Toxicon 30 1992 265 293
30. D. Kordis, I. Krizaj, and F. Gubensek Functional diversification of animal toxins by adaptative evolution A. Ménez Perspectives in Molecular Toxinology 2002 Wiley New York 401 419
31. X. Lu, S. Rahman, V.V. Kakkar, and K.S. Authi Substitutions of proline 42 to alanine and methionine 46 to asparagine around the RGD domain of the neurotoxin dendroaspin alter its preferential antagonism to that resembling the disintegrin elegantin J. Biol. Chem. 271 1996 289 294
32. 3 integrins and expression of ligand-induced binding sites Blood 90 1997 1565 1575
33. 5 integrins in an RGD-independent manner J. Biol. Chem. 274 1999 12468 12473
34. 1 integrin Biochemistry 38 1999 13302 13309
35. 1 with VCAM-1, tenascin-C, and osteopontin J. Biol. Chem. 275 2000 31930 31937
36. 1 integrin in vitro and angiogenesis in vivo Cancer Res. 63 2003 2020 2023
37. F.S. Markland Snake venoms and the hemostatic system Toxicon 36 1998 1749 1800
38. 3 integrins FEBS Lett. 291 1996 139 143
39. M.A. McLane, C. Marcinkiewicz, S. Vijay-Kumar, I. Wierzbicka-Patynowski, and S. Niewiarowski Viper venom disintegrins and related molecules Proc. Soc. Exp. Biol. Med. 219 1998 109 119
40. A. Ménez Perspectives in Molecular Toxinology 2002 Wiley Chichester, UK
41. D. Monleón, M.P. Moreno-Murciano, H. Kovacs, C. Marcinkiewicz, J.J. Calvete, and B. Celda Concerted motions of the integrin-binding loop and the c-terminal tail of the non-RGD disintegrin obtustatin J. Biol. Chem. 278 2003 45570 45576
42. M.P. Moreno-Murciano, D. Monleón, J.J. Calvete, B. Celda, and C. Marcinkiewicz Amino acid sequence and homology modeling of obtustatin, a novel non-RGD-containing short disintegrin isolated from the venom of Vipera lebetina obtusa Protein Sci. 12 2003 366 371
43. M.P. Moreno-Murciano, D. Monleón, C. Marcinkiewicz, J.J. Calvete, and B. Celda NMR solution structure of the non-RGD disintegrin obtustatin J. Mol. Biol. 329 2003 135 145
44. A.M. Moura da Silva, R.D.G. Theakston, and J.M. Crampton Evolution of disintegrin cysteine-rich and mammalian matrix-degrading metalloproteinases: gene duplication and divergence of a common ancestor rather than convergent evolution J. Mol. Evol. 43 1996 263 269
45. 1 integrin by jararhagin, a metalloproteinase/disintegrin from Bothrops jararaca venom Thromb. Res. 102 2001 153 159
46. S. Niewiarowski, C. Marcinkiewicz, I. Wierzbicka-Patynowski, M.A. McLane, and J.J. Calvete Structure and function of disintegrins and C-lectins: viper venom proteins modulating cell adhesion A. Ménez Perspectives in Molecular Toxinology 2002 Wiley New York 327 340
47. T. Nikai, K. Taniguchi, Y. Komori, K. Masuda, J.W. Fox, and H. Sugihara Primary structure and functional characterization of bilitoxin-1, a novel dimeric P-II snake venom metalloproteinase from Agkistrodon bilineatus venom Arch. Biochem. Biophys. 378 2000 6 15
48. 1 J. Biol. Chem. 279 2004 7962 7970
49. M. Ohno, T. Ogawa, N. Oda-Ueda, T. Chijiwa, and S. Hattori Accelerated and regional evolution of snake venom gland isozymes A. Ménez Perspectives in Molecular Toxinology 2002 Wiley New York 387 419
50. D. Okuda, C. Nozaki, F. Sekiya, and T. Morita Comparative biochemistry of disintegrins isolated from snake venoms: consideration of the taxonomy and geographical distribution of snakes in the genus Echis J. Biochem. 129 2001 615 620
51. D. Okuda, H. Koike, and T. Morita A new gene structure of the disintegrin family: a subunit of dimeric disintegrin has a short coding region Biochemistry 41 2002 14248 14254
52. K. Oshikawa, and S. Terada Ussuristatin 2, a novel KGD-bearing disintegrin from Agkistrodon ussuriensis venom J. Biochem. 125 1999 31 35
53. 1 integrins J. Biol. Chem. 269 1994 20233 20238
54. 1 integrin complexes Biochem. J. 335 1998 247 257
55. R.M. Scarborough, J.W. Rose, M.A. Hsu, D.R. Phillips, V.A. Fried, A.M. Campbell, L. Nannizzi, and I.F. Charo Barbourin. A GPIIb-IIIa-specific integrin antagonist from the venom of Sistrurus M. barbouri J. Biol. Chem. 266 1991 9359 9362
56. H. Senn, and W. Klaus The nuclear magnetic resonance solution structure of flavoridin, an antagonist of the platelet GPIIb-IIIa receptor J. Mol. Biol. 232 1993 907 925
57. K-I. Shimokawa, J.D. Shannon, L-G. Jia, and J.W. Fox Sequence and biological activity of catrocollastatin-C: a disintegrin-like/cysteine-rich two domain protein from Crotalus atrox venom Arch. Biochem. Biophys. 343 1997 35 43
58. K-i. Shimokawa, L-G. Jia, J.D. Shannon, and J.W. Fox Isolation, sequence analysis, and biological activity of atrolysin E/D, the non-RGD disintegrin domain from Crotalus atrox venom Arch. Biochem. Biophys. 354 1998 239 246
59. J. Shin, S-Y. Hong, K. Chung, I. Kang, Y. Jang, D.-S. Kim, and W. Lee Solution structure of a novel disintegrin, salmosin, from Agkistrodon halys venom Biochemistry 42 2003 14408 14415
60. 1H NMR spectroscopy and simulated annealing calculations Int. J. Pept. Protein Res. 48 1996 220 228
61. 1 integrin-mediated cell adhesion Arch. Biochem. Biophys. 384 2000 341 350
62. 1 integrins J. Biol. Chem. 274 1999 37809 37814
63. R.J.P. Williams NMR studies of mobility within protein structure Eur. J. Biochem. 183 1989 479 497
64. P.S. Wright, V. Saudek, T.J. Owen, S.L. Harbeson, and A.J. Bitonti An echistatin C-terminal peptide activates GPIIbIIIa binding to fibrinogen, fibronectin, vitronectin and collagen type I and type IV Biochem. J. 293 1993 263 267
65. W.B. Wu, S.C. Chang, M.Y. Liau, and T.F. Huang Purification, molecular cloning and mechanism of action of graminelysin I, a snake-venom-derived metalloproteinase that induces apoptosis of human endothelial cells Biochem. J. 357 2001 719 728
66. 3 Science 294 2001 339 345
67. 3 in complex with an Arg-Gly-Asp ligand Science 296 2002 151 155
68. Q. Zhou, J.B. Smith, and M.H. Grossman Molecular cloning and expression of catrocollastatin, a snake-venom protein from Crotalus atrox (western diamondback rattlesnake) which inhibits platelet adhesion to collagen Biochem. J. 307 1995 411 417
69. P. Zigrino, A.S. Kamiguti, J. Eble, C. Drescher, R. Nischt, J.W. Fox, and C. Mauch The reprolysin jararhagin, a snake venom metalloproteinase, functions as a fibrillar collagen agonist involved in fibroblast cell adhesion and signaling J. Biol. Chem. 277 2002 40528 40535