Three-dimensional structure of the RGD-containing snake toxin albolabrin in solution, based on H NMR spectroscopy and simulated annealing calculations

International Journal of Peptide and Protein Research

Volumn 48, Issue 3, 1996, Pages 220-228

  John Smith, K ^a   Jaseja, Mahesh ^a   Xinjie, L U ^a   Williams, Janice A ^a   Hyde, Eva I ^a   Trayer, Ian P ^a  

^a UNIVERSITY OF BIRMINGHAM   (United Kingdom)

Author keywords

Disintegrin; Disulfide; Snake venom

Indexed keywords

ALBOLABRIN; SNAKE VENOM;

ARTICLE; CALCULATION; COMPUTER SIMULATION; DRUG STRUCTURE; IN VITRO STUDY; NONHUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY;

CROTALID VENOMS; MAGNETIC RESONANCE SPECTROSCOPY; OLIGOPEPTIDES; PEPTIDES; PROTEIN CONFORMATION;

SERPENTES;

EID: 0029776696     PISSN: 03678377     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1399-3011.1996.tb00835.x     Document Type: Article

References (44)

1. Williams, J.A. (1992) Palhol. Biol. 40, 813-821
2. Ruoslahti, E. & Pierschbacher, M.D. (1987) Science 227, 491-479
3. Gould, R.J., Polokoff, M.A., Friedman, P.A., Huang, T-F. Cook, J.J. & Niewiarowski, S. (1990) Proc. Soc. Exp. Biol Afed. 195, 168-171
4. Dennis, M.S., Henzel, W.J., Pitti, R.M., Lipari, M.T., Napier, M.A., Diesher, T.A., Bunting, S. & Lazarus, R.A. (1990) Proc. Nall. Acad. Sci. USA. 87, 2471-2475
5. Calvete, J.J., Schafer, W., Soszka, T., Lu, W., Cook, J.J., Jameson, B.A. & Niewiarowski, S. (1991) Biochemistry 30, 5225-5229
6. Adler, M., Carter, P., Lazarus, R.A. & Wagner, G. (1993) Biochemistry 32, 282-289
7. Calvete, J.J., Wang, Y., Mann, W., Schafer, W., Niewiarowski, S. & Stewart, G.J. (1992) FEES Lett. 309, 316-320
8. Klaus, W., Broger, C, Gerber, P. & Senn, H. (1993) J. Moi Biol. 232, 897-906
9. Cooke, R.M., Carter, E.G., Murray-Rust, P., Hartshorn, M.J., Herzyk, P. & Hubbard, R.E. (1992) Protein Eng. S, 473-477
10. Adler, M., Lazarus, R.A., Dennis, M.S. & Wagner, G. (1991) Science 253, 445-448
11. Adler, M., & Wagner, G. (1992) Biochemistry 31, 1031-1039
12. Senn, H. & Klaus, W. (1993) J. Mol Biol 232, 907-925
13. Cooke, R.M., Carter, B.G., Martin, D.M.A., Murray-Rust, P. & Weir, M.P. (1991) Ew. J. Biochem. 202, 323-328
14. Dalvit, C., Widmer, H., Bovermann, G., Breckenridge, R. & Metternich, R. (1991) Ew. J. Biochem. 202, 315-321
15. Chen, Y., Pitzenberg, S.M., Garsky, V.M., Lumma, P.K., Sanyal, G. & Baum, J. (1991) Biochemistry 30, 11625-11636
16. Saudek, V., Atkinson, R.A. & Pelton, J.T. (1991) Biochemistry 30, 7369-7372
17. Atkinson, R.A., Saudek, V., & Pelton, J.T. (1994) Int. J. Peptide Protein Res. 43, 563-572
18. Jaseja, M., Smith, K.J., Lu, X., Williams, J.A., Trayer, H., Trayer, LP. & Hyde, E.I. (1993) EUT. J. Biochem. 218, 853-860
19. Wüthrich, K., Billeter, M. & Braun, W. (1983) J. Mol. Biol. 169, 949-961
20. Clore, G.M., Gronenborn, A.M., Nilges, M. & Ryan, C.A. (1987) Biochemistry 26, 8012-8023
21. Pullman, B. & Pullman, A. (1974) Adv. Protein. Cliem. 28, 347-526
22. Brünger, A.T. (1992) X-PLOR 3.1 Manual: A System for X-Ray Crystallography and NMR, Yale University Press
23. Holak, T., Nigles, M. & Oschkinat, H. (1989) FEBS Lett. 242, 218-224
24. Weir, H.M., Kraulis, P.J., Hill, C.S., Raine, A.R.C., Laue, D.E. & Thomas, J.O. (1993) EMBO J. 12, 1311-1319
25. Güntert, P., Braun, W. & Wüthrich, K. (1991) J. Mol. Biol. 217, 517-530
26. Güntert, P., Qian, Y.P., Otting, G., Muller, M., Gehring, W. & Wüthrich, K. (1991) J. Mol Biol. 217, 531-540
27. Güntert, P., Braun, W., Billeter, M. & Wüthrich, K. (1989) J. Am. C/iem. Soc. 111, 3997-4004
28. Richardson, J.S. (1981) Adr. Protein Cliem. 34, 167-337
29. Dennis, M.S., Carter, P. & Lazarus, R.A. (1993) Proteins: Struct. Func. Genet. 15, 312-321
30. Pace, C.N., Grimsley, G.R., Thomson, J.A. & Barnett, B.J. (1988)7. Biol. Ghent. 263, 11820-11825
31. Katz, B.A. & KossiakofT, A. (1986) J. Biol. Cliem. 261, 15480-15488
32. Villafranca, J.E., Howell, E.E., Oatley, S.J., Xuong, N. & Kraut, J. (1987) Biochemistry 26, 2182-2189
33. Wetzel, R. (1987) Trends Biochcm. Sci. 14, 478-482
34. Seymour, J.L., Henzel, W.J., Kevins, B., Stults, J.T. & Lazarus, R.A. (1990) J. Biol. Cliem. 265, 10143-10147
35. McDowell, R.S., Dennis, M.S., Louie, A., Shuster, M-, Mulkerrin, M.G. & Lazarus, R.A. (1992) Biochemistry, 31, 4766-41772
36. Krezel, A.M., Wagner, G.M Seymour-UImer, J., & Lazarus, R.A. (1994) Science 264, 1944-1947
37. Sutclifie, M.J., Jaseja, M., Hyde, E.I., Lu, X. & Williams, J.A. (1994) Nature Struct. Biol. 1, 802-807
38. Lee, G., Chan, W., Hurle, M.R., DesJarlais, R.L., Watson, F. Sathe, G.M. & Wetzel, R. (1993) Protein Eng. 6, 745-754
39. Yamada, T., Matsushima, M., Inaka, K., Ohkubo, T., Uyeda, A., Maeda, T., Titani, K., Sekiguchi, K. & Kikuchi, M. (1993) J. Biol. Chem.268, 10588-10592
40. Hashino, K., Shimojo, T., Kimizuka, F., Kalo, L, Maeda, T., Sekiguchi, K. & Titani, K. (1992) J. Biochem. 112, 547-551
41. Rini, J.M., Schulzegahmen, U., & Wilson, I.A. (1992) Science 255, 959-965
42. Westhof, E., Altschuh, D., Moras, D., Bloomer, A.C., Mondragon, A., Klug, A. & van Regenmortel, M.H.V. (1984) Nature (London) 3ll~l23-l26
43. Tainer, J.A., GetzofT, E.D., Alexander, H., Houghten, R.A., Oison, A.J., Lerner, R.A. & Hendrickson, W.A. (1984) Nature (London) 312, 127-134
44. Kraulis, P. (1991) J. Appl. Crystallogr. 24, 946