Sizing-up finite fluorescent particles with nanometer-scale precision by convolution and correlation image analysis

European Biophysics Journal

Volumn 34, Issue 3, 2005, Pages 181-199

  Gennerich, Arne ^a   Schild, Detlev ^a  

^a UNIVERSITY OF GÖTTINGEN   (Germany)

Author keywords

Accuracy; Convolution; Correlation; Eschericha coli; Laser Scanning Microscopy; Tracking precision

Indexed keywords

ACCURACY; ALGORITHM; ARTICLE; BACTERIUM; COMPUTER SIMULATION; CONFOCAL LASER MICROSCOPY; CONTROLLED STUDY; CORRELATION ANALYSIS; ERYTHROCYTE SHAPE; ESCHERICHIA COLI; IMAGE ANALYSIS; NONHUMAN; PARTICLE SIZE; SIGNAL NOISE RATIO;

ALGORITHMS; CELL POLARITY; CELL SIZE; CELLS, IMMOBILIZED; EQUIPMENT DESIGN; EQUIPMENT FAILURE ANALYSIS; ESCHERICHIA COLI; IMAGE ENHANCEMENT; IMAGE INTERPRETATION, COMPUTER-ASSISTED; MICROSCOPY, CONFOCAL; MICROSCOPY, FLUORESCENCE; MOTION; NANOTUBES; PARTICLE SIZE; PATTERN RECOGNITION, AUTOMATED; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; STATISTICS; SYSTEMS INTEGRATION;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 18844445064     PISSN: 01757571     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00249-004-0441-0     Document Type: Article

References (17)

1. Anderson CM, Georgiou GN, Morrison IEG, Stevenson GVW, Cherry RJ (1992) Tracking of cell surface receptors by fluorescence digital imaging microscopy using a charged-coupled device camera. J Cell Sci 101:415-425
2. Bobroff N (1986) Position measurement with a resolution and noise-limited instrument. Rev Sci Instrum 57:1152-1157
3. Cheezum MK, Walker WF, Guilford WH (2001) Quantitative comparison of algorithms for tracking single fluorescent particles. Biophys J 81:2378-2388
4. Gennerich A, Schild D (2000) Fluorescence correlation spectroscopy in small cytosolic compartments depends critically on the diffusion model used. Biophys J 79:3294-3306
5. Gennerich A, Schild D (2002) Anisotropic diffusion in mitral cell dendrites revealed by fluorescence correlation spectroscopy. Biophys J 83:510-522
6. Kim SA, Schwille P (2003) Intracellular applications of fluorescence correlation spectroscopy: prospects for neuroscience. Curr Opin Neurobiol 13:583-590
7. Krichevsky O, Bonnet G (2002) Fluorescence correlation spectroscopy: the technique and its application. Rep Prog Phys 65:251-297
8. Kues T, Peters P, Kubitscheck U (2001) Visualization and tracking of single protein molecules in the cell nucleus. Biophys J 80:2954-2967
9. Marquarth DW (1963) An algorithm for least-squares estimation of nonlinear parameters. J Soc Indust Appl Math 11:431-441
10. Petersen NO, Höddelius PL, Wiseman PW, Seger O, Magnusson KE (1993) Quantitation of membrane receptor distributions by image correlation spectroscopy: concept and application. Biophys J 65:1135-1146
11. Rigler R, Mets Ü, Widengren J, Kask P (1993) Fluorescence correlation spectroscopy with high count rate and low background: analysis of translational diffusion. Eur Biophys J 22:169-175
12. Saxton MJ, Jacobson K (1997) Single-particle tracking: applications to membrane dynamics. Annu Rev Biophys Biomol Struct 26:373-399
13. Schütz GJ, Schindler H, Schmidt T (1997) Single-molecule microscopy on model membranes reveals anomalous diffusion. Biophys J 73:1073-1080
14. Thompson RE, Larson SR, Webb WW (2002) Precise nanometer localization analysis for individual fluorescent probes. Biophys J 82:2775-2783
15. Walker WF, Trahey GE (1994) A fundamental limit on the performance of correlation based phase correction and flow estimation techiques. IEEE T Ultrason Ferroelec Freq Cont 41:644-654
16. Yildiz A, Forkey JN, McKinney SA, Ha T, Goldman YE, Selvin PR (2003) Myosin V walks hand-over-hand: single fluorophore imaging with 1.5-nm localization. Science 300:2061-2065
17. Yu DF, Fessler JA (2000) Mean and variance of single photon counting with deadtime. Phys Med Biol 45:2043-2056