-
1
-
-
1842687449
-
Long-term reinfection of the human genome by endogenous retroviruses
-
Belshaw, R., V. Pereira, A. Katzourakis, G. Talbot, A. Burt, and M. Tristem. 2004. Long-term reinfection of the human genome by endogenous retroviruses. Proc. Natl. Acad. Sci. USA 101:4894-4899.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 4894-4899
-
-
Belshaw, R.1
Pereira, V.2
Katzourakis, A.3
Talbot, G.4
Burt, A.5
Tristem, M.6
-
2
-
-
0038003686
-
Restriction factors: A defense against retroviral infection
-
Bieniasz, P. D. 2003. Restriction factors: a defense against retroviral infection. Trends Microbiol. 11:286-291.
-
(2003)
Trends Microbiol.
, vol.11
, pp. 286-291
-
-
Bieniasz, P.D.1
-
3
-
-
0019322245
-
DNA methylation and the frequency of CpG in animal DNA
-
Bird, A. 1980. DNA methylation and the frequency of CpG in animal DNA. Nucleic Acids Res. 8:1499-1504.
-
(1980)
Nucleic Acids Res.
, vol.8
, pp. 1499-1504
-
-
Bird, A.1
-
4
-
-
0022611992
-
A model for DNA sequence evolution within transposable element families
-
Brookfield, J. F. Y. 1986. A model for DNA sequence evolution within transposable element families. Genetics 112:393-407.
-
(1986)
Genetics
, vol.112
, pp. 393-407
-
-
Brookfield, J.F.Y.1
-
5
-
-
0027153224
-
The generation of sequence similarity in SINEs and LINEs
-
Brookfield, J. F. Y. 1993. The generation of sequence similarity in SINEs and LINEs. Trends Genet. 9:38-39.
-
(1993)
Trends Genet.
, vol.9
, pp. 38-39
-
-
Brookfield, J.F.Y.1
-
6
-
-
0002452239
-
Transposable elements as selfish DNA
-
D. J. Sherratt (ed.), Oxford University Press, New York, N.Y.
-
Brookfield, J. F. Y. 1995. Transposable elements as selfish DNA, p. 130-153. In D. J. Sherratt (ed.), Mobile genetic elements. Oxford University Press, New York, N.Y.
-
(1995)
Mobile Genetic Elements
, pp. 130-153
-
-
Brookfield, J.F.Y.1
-
7
-
-
0242318323
-
Mobile DNAs: The poacher turned gamekeeper
-
Brookfield, J. F. Y. 2003. Mobile DNAs: The poacher turned gamekeeper. Curr. Biol. 13:R846-R847.
-
(2003)
Curr. Biol.
, vol.13
-
-
Brookfield, J.F.Y.1
-
8
-
-
0037294876
-
Human-specific subfamilies of HERV-K (HML-2) long terminal repeats: Three master genes were active simultaneously during branching of hominoid lineages
-
Buzdin, A., S. Ustyugova, K. Khodosevich, I. Mamedov, Y. Lebedev, G. Hunsmann, and E. Sverdlov. 2003. Human-specific subfamilies of HERV-K (HML-2) long terminal repeats: three master genes were active simultaneously during branching of hominoid lineages. Genomics 81:149-156.
-
(2003)
Genomics
, vol.81
, pp. 149-156
-
-
Buzdin, A.1
Ustyugova, S.2
Khodosevich, K.3
Mamedov, I.4
Lebedev, Y.5
Hunsmann, G.6
Sverdlov, E.7
-
9
-
-
0036188623
-
Mechanisms regulating the copy numbers oi six LTR retrotransposons in the genome of Drosophila melanogaster
-
Carr, M., J. R. Soloway, T. E. Robinson, and J. F. Y. Brookfield. 2002. Mechanisms regulating the copy numbers oi six LTR retrotransposons in the genome of Drosophila melanogaster. Chromosoma 110:511-518.
-
(2002)
Chromosoma
, vol.110
, pp. 511-518
-
-
Carr, M.1
Soloway, J.R.2
Robinson, T.E.3
Brookfield, J.F.Y.4
-
10
-
-
0037633476
-
Plant LTR-retrotransposons and MITEs: Control of transposition and impact on the evolution of plant genes and genomes
-
Casacuberta, J. M., and N. Santiago. 2003. Plant LTR-retrotransposons and MITEs: control of transposition and impact on the evolution of plant genes and genomes. Gene 311:1-11.
-
(2003)
Gene
, vol.311
, pp. 1-11
-
-
Casacuberta, J.M.1
Santiago, N.2
-
11
-
-
0021077476
-
The population dynamics of transposable elements
-
Charlesworth, B., and D. Charlesworth. 1983. The population dynamics of transposable elements. Genet. Res. 42:1-27.
-
(1983)
Genet. Res.
, vol.42
, pp. 1-27
-
-
Charlesworth, B.1
Charlesworth, D.2
-
12
-
-
0030031643
-
Computer simulation of transposable element evolution: Random template and strict master models
-
Clough, J. E., J. A. Foster, M. Barnett, and H. A. Wichman. 1996. Computer simulation of transposable element evolution: random template and strict master models. J. Mol. Evol. 42:52-58.
-
(1996)
J. Mol. Evol.
, vol.42
, pp. 52-58
-
-
Clough, J.E.1
Foster, J.A.2
Barnett, M.3
Wichman, H.A.4
-
13
-
-
0036221249
-
Characterization of the intragenomic spread of the human endogenous retrovirus family HERV-W
-
Costas, J. 2002. Characterization of the intragenomic spread of the human endogenous retrovirus family HERV-W. Mol. Biol. Evol. 19:526-533.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 526-533
-
-
Costas, J.1
-
14
-
-
0037310273
-
Molecular characterization of the recent intragenomic spread of the murine endogenous retrovirus MuERV-L
-
Costas, J. 2003. Molecular characterization of the recent intragenomic spread of the murine endogenous retrovirus MuERV-L. J. Mol. Evol. 56:181-186.
-
(2003)
J. Mol. Evol.
, vol.56
, pp. 181-186
-
-
Costas, J.1
-
15
-
-
0033973992
-
Evolutionary history of the human endogenous retrovirus family ERV9
-
Costas, J., and H. Naveira. 2000. Evolutionary history of the human endogenous retrovirus family ERV9. Mol. Biol. Evol. 17:320-330.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 320-330
-
-
Costas, J.1
Naveira, H.2
-
16
-
-
0026757177
-
Master genes in mammalian repetitive DNA amplification
-
Deininger, P. L., M. A. Batzer, C. A. Hutchison III, and M. H. Edgell. 1992. Master genes in mammalian repetitive DNA amplification. Trends Genet. 8:307-311.
-
(1992)
Trends Genet.
, vol.8
, pp. 307-311
-
-
Deininger, P.L.1
Batzer, M.A.2
Hutchison III, C.A.3
Edgell, M.H.4
-
17
-
-
0037786824
-
COM, a heterochromatic locus governing the control of independent endogenous retroviruses from Drosophila melanogaster
-
Desset, S., C. Meignin, B. Dastugue, and C. Vaury. 2003. COM, a heterochromatic locus governing the control of independent endogenous retroviruses from Drosophila melanogaster. Genetics 164:501-509.
-
(2003)
Genetics
, vol.164
, pp. 501-509
-
-
Desset, S.1
Meignin, C.2
Dastugue, B.3
Vaury, C.4
-
18
-
-
0028880713
-
Mobilization of an ERV9 human endogenous retroviral element during primate evolution
-
Di Cristofano, A., M. Strazzullo, T. Parisi, and G. La Mantia. 1995. Mobilization of an ERV9 human endogenous retroviral element during primate evolution. Virology 213:271-275.
-
(1995)
Virology
, vol.213
, pp. 271-275
-
-
Di Cristofano, A.1
Strazzullo, M.2
Parisi, T.3
La Mantia, G.4
-
19
-
-
0036889395
-
Fruit flies and humans respond differently to retrotransposons
-
Eickbush, T. H., and A. V. Furano. 2002. Fruit flies and humans respond differently to retrotransposons. Curr. Opin. Genet. Dev. 12:669-674.
-
(2002)
Curr. Opin. Genet. Dev.
, vol.12
, pp. 669-674
-
-
Eickbush, T.H.1
Furano, A.V.2
-
20
-
-
0037357461
-
Estimation of divergence times for major lineages of primate species
-
Glazko, G. V., and M. Nei. 2003. Estimation of divergence times for major lineages of primate species. Mol. Biol. Evol. 20:424-434.
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 424-434
-
-
Glazko, G.V.1
Nei, M.2
-
21
-
-
84941132093
-
Approaches to identification and analysis of interspersed repetitive DNA sequences
-
M. D. Adams, C. Fields, and J. C. Venter (ed.), Academic Press, London, United Kingdom
-
Jurka, J. 1994. Approaches to identification and analysis of interspersed repetitive DNA sequences, p. 294-298. In M. D. Adams, C. Fields, and J. C. Venter (ed.), Automated DNA sequencing and analysis. Academic Press, London, United Kingdom.
-
(1994)
Automated DNA Sequencing and Analysis
, pp. 294-298
-
-
Jurka, J.1
-
22
-
-
0021944119
-
Evolution and extinction of transposable elements in mendelian populations
-
Kaplan, N., T. Darden, and C. H. Langley. 1985. Evolution and extinction of transposable elements in mendelian populations. Genetics 109:459-480.
-
(1985)
Genetics
, vol.109
, pp. 459-480
-
-
Kaplan, N.1
Darden, T.2
Langley, C.H.3
-
23
-
-
0030860770
-
Transposable elements as sources of variation in animals and plants
-
Kidwell, M. G., and D. Lisch. 1997. Transposable elements as sources of variation in animals and plants. Proc. Natl. Acad. Sci. USA 94:7704-7711.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 7704-7711
-
-
Kidwell, M.G.1
Lisch, D.2
-
24
-
-
0028330190
-
The introduction of a transpositionally active copy of retrotransposon gypsy into a stable strain of Drosophila melanogaster causes genetic instability
-
Kim, A. I., N. V. Lynbomirskaya, E. S. Belyaeva, and Y. V. Ilyin. 1994. The introduction of a transpositionally active copy of retrotransposon gypsy into a stable strain of Drosophila melanogaster causes genetic instability. Mol. Gen. Genet. 242:472-477.
-
(1994)
Mol. Gen. Genet.
, vol.242
, pp. 472-477
-
-
Kim, A.I.1
Lynbomirskaya, N.V.2
Belyaeva, E.S.3
Ilyin, Y.V.4
-
25
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
Lander, E. S., L. M. Linton, B. Birren, et al. 2001. Initial sequencing and analysis of the human genome. Nature 409:860-921.
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
Lander, E.S.1
Linton, L.M.2
Birren, B.3
-
26
-
-
0026787143
-
Structural and functional organization of the human endogenous retroviral ERV9 sequences
-
Lania, L., A. Di Cristofano, M. Strazzullo, G. Pengue, B. Majello, and G. La Mantia. 1992. Structural and functional organization of the human endogenous retroviral ERV9 sequences. Virology 191:464-468.
-
(1992)
Virology
, vol.191
, pp. 464-468
-
-
Lania, L.1
Di Cristofano, A.2
Strazzullo, M.3
Pengue, G.4
Majello, B.5
La Mantia, G.6
-
27
-
-
0038645110
-
Transposable elements and vertebrate protein diversity
-
Lorenc, A., and W. Makalowski. 2003. Transposable elements and vertebrate protein diversity. Genetica 118:183-191.
-
(2003)
Genetica
, vol.118
, pp. 183-191
-
-
Lorenc, A.1
Makalowski, W.2
-
28
-
-
0036366576
-
Homology-dependent gene silencing and host defense in plants
-
Matzke, M. A., W. Aufsatz, T. Kanno, M F. Mette, and A. J. M. Matzke. 2002. Homology-dependent gene silencing and host defense in plants. Adv. Genet. 46:235-275.
-
(2002)
Adv. Genet.
, vol.46
, pp. 235-275
-
-
Matzke, M.A.1
Aufsatz, W.2
Kanno, T.3
Mette, M.F.4
Matzke, A.J.M.5
-
29
-
-
0031797726
-
Human-specific integrations of the HERV-K endogenous retrovirus family
-
Medstrand, P., and D. L. Mager. 1998. Human-specific integrations of the HERV-K endogenous retrovirus family. J. Virol. 72:9782-9787.
-
(1998)
J. Virol.
, vol.72
, pp. 9782-9787
-
-
Medstrand, P.1
Mager, D.L.2
-
30
-
-
0033288496
-
Molecular domestication - More than a sporadic episode in evolution
-
Miller, W. J., J. F. McDonald, D. Nouaud, and D. Anxolabehere. 1999. Molecular domestication - more than a sporadic episode in evolution. Genetica 107:197-207.
-
(1999)
Genetica
, vol.107
, pp. 197-207
-
-
Miller, W.J.1
McDonald, J.F.2
Nouaud, D.3
Anxolabehere, D.4
-
31
-
-
0033288823
-
Sure facts, speculations, and open questions about the evolution of transposable element copy number
-
Nuzhdin, S. V. 1999. Sure facts, speculations, and open questions about the evolution of transposable element copy number. Genetica 107:129-137.
-
(1999)
Genetica
, vol.107
, pp. 129-137
-
-
Nuzhdin, S.V.1
-
32
-
-
0034037106
-
Master copy is not responsible for the high rate of copia transposition in Drosophila
-
Perdue, S., and S. V. Nuzhdin. 2000. Master copy is not responsible for the high rate of copia transposition in Drosophila. Mol. Biol. Evol. 17:984-986.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 984-986
-
-
Perdue, S.1
Nuzhdin, S.V.2
-
33
-
-
0030928378
-
Seq-Gen: An application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees
-
Rambaut, A., and N. C. Grassly. 1997. Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees. Comput. Appl. Biosci. 13:235-238.
-
(1997)
Comput. Appl. Biosci.
, vol.13
, pp. 235-238
-
-
Rambaut, A.1
Grassly, N.C.2
-
34
-
-
19344362934
-
Ancient adaptive evolution of the primate antiviral DNA-editing enzyme APOBEC3G
-
Sawyer, S. L., M. Emerman, and H. S. Malik. 2004. Ancient adaptive evolution of the primate antiviral DNA-editing enzyme APOBEC3G. PLoS Biol. 2:e275.
-
(2004)
PLoS Biol.
, vol.2
-
-
Sawyer, S.L.1
Emerman, M.2
Malik, H.S.3
-
35
-
-
0345306117
-
Transposon silencing in the Caenorhabditis elegans germ line by natural RNAi
-
Sijen, T., and R. H. Plasterk. 2003. Transposon silencing in the Caenorhabditis elegans germ line by natural RNAi. Nature 426:310-314.
-
(2003)
Nature
, vol.426
, pp. 310-314
-
-
Sijen, T.1
Plasterk, R.H.2
-
36
-
-
0035053177
-
Chromosomal distribution, localization and expression of the human endogenous retrovirus ERV9
-
Svensson, A. C., T. Raudsepp, C. Larsson, A. Di Cristofano, M. G. Chowdhary, L. Rask, and G. Andersson. 2001. Chromosomal distribution, localization and expression of the human endogenous retrovirus ERV9. Cytogenet. Cell Genet. 92:89-96.
-
(2001)
Cytogenet. Cell Genet.
, vol.92
, pp. 89-96
-
-
Svensson, A.C.1
Raudsepp, T.2
Larsson, C.3
Di Cristofano, A.4
Chowdhary, M.G.5
Rask, L.6
Andersson, G.7
-
37
-
-
0030025803
-
A population genetic study of the evolution of SINEs. II. Sequence evolution under the master copy model
-
Tachida, H. 1996. A population genetic study of the evolution of SINEs. II. Sequence evolution under the master copy model. Genetics 143:1033-1042.
-
(1996)
Genetics
, vol.143
, pp. 1033-1042
-
-
Tachida, H.1
-
38
-
-
0027459098
-
Allelic genealogy and human evolution
-
Takahata, N. 1993. Allelic genealogy and human evolution. Mol. Biol. Evol. 10:2-22.
-
(1993)
Mol. Biol. Evol.
, vol.10
, pp. 2-22
-
-
Takahata, N.1
-
39
-
-
0034755162
-
Fv-4: Identification of the defect in Env and the mechanism of resistance to ecotropic murine leukemia virus
-
Taylor, G. M., Y. Gao, and D. A. Sanders. 2001. Fv-4: identification of the defect in Env and the mechanism of resistance to ecotropic murine leukemia virus. J. Virol. 75:11244-11248.
-
(2001)
J. Virol.
, vol.75
, pp. 11244-11248
-
-
Taylor, G.M.1
Gao, Y.2
Sanders, D.A.3
-
40
-
-
0034466968
-
The kinetics of transposable element autoregulation
-
Townsend, J. P., and D. L. Hartl. 2000. The kinetics of transposable element autoregulation. Genetica 108:229-237.
-
(2000)
Genetica
, vol.108
, pp. 229-237
-
-
Townsend, J.P.1
Hartl, D.L.2
-
41
-
-
0034108733
-
Identification and characterization of novel human endogenous retrovirus families by phylogenetic screening of the human genome mapping project database
-
Tristem, M. 2000. Identification and characterization of novel human endogenous retrovirus families by phylogenetic screening of the human genome mapping project database. J. Virol. 74:3715-3730.
-
(2000)
J. Virol.
, vol.74
, pp. 3715-3730
-
-
Tristem, M.1
-
42
-
-
0035797901
-
Insertional polymorphisms of full-length endogenous retroviruses in humans
-
Turner, G., M. Barbulescu, M. Su, M. I. Jensen-Seaman, K. K. Kidd, and J. Lenz. 2001. Insertional polymorphisms of full-length endogenous retroviruses in humans. Curr. Biol. 11:1531-1535.
-
(2001)
Curr. Biol.
, vol.11
, pp. 1531-1535
-
-
Turner, G.1
Barbulescu, M.2
Su, M.3
Jensen-Seaman, M.I.4
Kidd, K.K.5
Lenz, J.6
-
43
-
-
0043202980
-
A genome-wide screen identifies 27 genes involved in transposon silencing in C. elegans
-
Vastenhouw, N. L., S. E. Fischer, V. J. Robert, K. L. Thijssen, A. G. Fraser, R. S. Kamath, J. Ahringer, and R. H. Plasterk. 2003. A genome-wide screen identifies 27 genes involved in transposon silencing in C. elegans. Curr. Biol. 13:1311-1316.
-
(2003)
Curr. Biol.
, vol.13
, pp. 1311-1316
-
-
Vastenhouw, N.L.1
Fischer, S.E.2
Robert, V.J.3
Thijssen, K.L.4
Fraser, A.G.5
Kamath, R.S.6
Ahringer, J.7
Plasterk, R.H.8
|