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Volumn 23, Issue 5, 2004, Pages 1000-1007

Structure of the La motif: A winged helix domain mediates RNA binding via a conserved aromatic patch

Author keywords

La autoantigen; RNA binding protein; RNA protein interactions; tRNA processing; Winged helix domain

Indexed keywords

DNA DIRECTED RNA POLYMERASE III; EXONUCLEASE; HELIX LOOP HELIX PROTEIN; HYDROXYL GROUP; LA ANTIGEN; NUCLEAR PROTEIN; PHOSPHOPROTEIN; PROTOZOAL PROTEIN; RNA BINDING PROTEIN;

EID: 1842419667     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1038/sj.emboj.7600115     Document Type: Article
Times cited : (89)

References (46)
  • 1
    • 0037614891 scopus 로고    scopus 로고
    • The Euplotes La motif protein p43 has properties of a telomerase-specific subunit
    • Aigner S, Postberg J, Lipps HJ, Cech TR (2003) The Euplotes La motif protein p43 has properties of a telomerase-specific subunit. Biochem 42: 5736-5747
    • (2003) Biochem , vol.42 , pp. 5736-5747
    • Aigner, S.1    Postberg, J.2    Lipps, H.J.3    Cech, T.R.4
  • 2
    • 0035800599 scopus 로고    scopus 로고
    • Structure-based analysis of protein-RNA interactions using the program ENTANGLE
    • Allers J, Shamoo Y (2001) Structure-based analysis of protein-RNA interactions using the program ENTANGLE. J Mol Biol 311: 75-86
    • (2001) J Mol Biol , vol.311 , pp. 75-86
    • Allers, J.1    Shamoo, Y.2
  • 3
    • 0016709754 scopus 로고
    • Antibodies to cellular antigens in Sjogren's syndrome
    • Alspaugh MA, Tan EM (1975) Antibodies to cellular antigens in Sjogren's syndrome. J Clin Invest 55: 1067-1073
    • (1975) J Clin Invest , vol.55 , pp. 1067-1073
    • Alspaugh, M.A.1    Tan, E.M.2
  • 4
    • 0033951279 scopus 로고    scopus 로고
    • Single stranded RNA binding proteins
    • Antson A (2000) Single stranded RNA binding proteins. Curr Opin Struct Biol 10: 87-94
    • (2000) Curr Opin Struct Biol , vol.10 , pp. 87-94
    • Antson, A.1
  • 5
    • 0028129437 scopus 로고
    • Developmental characterization of a Drosophila RNA-binding protein homologous to the human systemic lupus erythematosus-associated La/SS-B autoantigen
    • Bai C, Li Z, Tolias PP (1994) Developmental characterization of a Drosophila RNA-binding protein homologous to the human systemic lupus erythematosus-associated La/SS-B autoantigen. Mol Biol Cell 14: 5123-5129
    • (1994) Mol Biol Cell , vol.14 , pp. 5123-5129
    • Bai, C.1    Li, Z.2    Tolias, P.P.3
  • 8
    • 0024272950 scopus 로고
    • Genomic structure and amino acid sequence domains of the human La autoantigen
    • Chambers JC, Kenan DJ, Martin BJ, Keene JD (1988) Genomic structure and amino acid sequence domains of the human La autoantigen. J Biol Chem 263: 18043-18051
    • (1988) J Biol Chem , vol.263 , pp. 18043-18051
    • Chambers, J.C.1    Kenan, D.J.2    Martin, B.J.3    Keene, J.D.4
  • 9
    • 0035827649 scopus 로고    scopus 로고
    • Reconstitution of transcription from the human U6 small nuclear RNA promoter with eight recombinant polypeptides and a partially purified RNA polymerase III complex
    • Chong SS, Hu P, Hernandez N (2001) Reconstitution of transcription from the human U6 small nuclear RNA promoter with eight recombinant polypeptides and a partially purified RNA polymerase III complex. J Biol Chem 276: 20727-20734
    • (2001) J Biol Chem , vol.276 , pp. 20727-20734
    • Chong, S.S.1    Hu, P.2    Hernandez, N.3
  • 10
    • 0033609121 scopus 로고    scopus 로고
    • Absence of interdomain contacts in the crystal structure of the RNA recognition motifs of Sex-lethal
    • Crowder SM, Kanaar R, Rio DC, Alber T (1999) Absence of interdomain contacts in the crystal structure of the RNA recognition motifs of Sex-lethal. Proc Natl Acad Sci USA 96: 4892-4897
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 4892-4897
    • Crowder, S.M.1    Kanaar, R.2    Rio, D.C.3    Alber, T.4
  • 11
    • 0031045585 scopus 로고    scopus 로고
    • Preparation of selenomethionyl proteins for phase determination
    • CW Carter, RM Sweet (eds). New York: Academic Press
    • Doublie S (1997) Preparation of selenomethionyl proteins for phase determination. In Macromolecular Crystallography, CW Carter, RM Sweet (eds) Vol. 276, pp 523-529. New York: Academic Press
    • (1997) Macromolecular Crystallography , vol.276 , pp. 523-529
    • Doublie, S.1
  • 12
    • 0343376120 scopus 로고    scopus 로고
    • Phosphorylation of the human La protein on serine 366 can regulate recycling of RNA polymerase III transcription complexes
    • Fan H, Sakulich AL, Goodier JL, Zhang X, Qin J, Maraia RJ (1997) Phosphorylation of the human La protein on serine 366 can regulate recycling of RNA polymerase III transcription complexes. Cell 88: 707-715
    • (1997) Cell , vol.88 , pp. 707-715
    • Fan, H.1    Sakulich, A.L.2    Goodier, J.L.3    Zhang, X.4    Qin, J.5    Maraia, R.J.6
  • 13
    • 0031813786 scopus 로고    scopus 로고
    • 5′ processing of tRNA precursors can be modulated by the human La antigen phosphoprotein
    • Fan H, Goodier JL, Chamberlain JR, Engelke DR, Maraia RJ (1998) 5′ processing of tRNA precursors can be modulated by the human La antigen phosphoprotein. Mol Cell Biol 18: 3201-3211
    • (1998) Mol Cell Biol , vol.18 , pp. 3201-3211
    • Fan, H.1    Goodier, J.L.2    Chamberlain, J.R.3    Engelke, D.R.4    Maraia, R.J.5
  • 14
    • 0036435883 scopus 로고    scopus 로고
    • Structure of prokaryotic SECIS mRNA hairpin and its interaction with elongation factor SelB
    • Fourmy D, Guittet E, Yoshizawa S (2002) Structure of prokaryotic SECIS mRNA hairpin and its interaction with elongation factor SelB. J Mol Biol 324: 137-150
    • (2002) J Mol Biol , vol.324 , pp. 137-150
    • Fourmy, D.1    Guittet, E.2    Yoshizawa, S.3
  • 16
    • 0030764687 scopus 로고    scopus 로고
    • A carboxy-terminal basic region controls RNA polymerase III transcription factor activity of human La protein
    • Goodier JL, Fan H, Maraia RJ (1997) A carboxy-terminal basic region controls RNA polymerase III transcription factor activity of human La protein. Mol Cell Biol 17: 5823-5832
    • (1997) Mol Cell Biol , vol.17 , pp. 5823-5832
    • Goodier, J.L.1    Fan, H.2    Maraia, R.J.3
  • 17
    • 0024449585 scopus 로고
    • The RNA binding protein La influences both the accuracy and the efficiency of the RNA polymerase III transcription in vitro
    • Gottlieb E, Steitz JA (1989) The RNA binding protein La influences both the accuracy and the efficiency of the RNA polymerase III transcription in vitro. EMBO J 8: 841-850
    • (1989) EMBO J , vol.8 , pp. 841-850
    • Gottlieb, E.1    Steitz, J.A.2
  • 18
    • 0038646814 scopus 로고    scopus 로고
    • Structure of the C-terminal domain of human La protein reveals a novel RNA recognition motif coupled to a helical nuclear retention element
    • Jacks A, Babon J, Kelly G, Manolaridis I, Cary PD, Curry S, Conte MR (2003) Structure of the C-terminal domain of human La protein reveals a novel RNA recognition motif coupled to a helical nuclear retention element. Structure 11: 833-843
    • (2003) Structure , vol.11 , pp. 833-843
    • Jacks, A.1    Babon, J.2    Kelly, G.3    Manolaridis, I.4    Cary, P.D.5    Curry, S.6    Conte, M.R.7
  • 19
    • 0030841587 scopus 로고    scopus 로고
    • Electron density map interpretation
    • CW Carter, RM Sweet (eds). New York: Academic Press
    • Kleywegt G, Jones AT (1997) Electron density map interpretation. In Methods in Crystallography, CW Carter, RM Sweet (eds) Vol. 277, pp 173-208. New York: Academic Press
    • (1997) Methods in Crystallography , vol.277 , pp. 173-208
    • Kleywegt, G.1    Jones, A.T.2
  • 20
    • 0026244229 scopus 로고
    • MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures
    • Kraulis PJ (1991) MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures. J Appl Crystallogr 24: 946-950
    • (1991) J Appl Crystallogr , vol.24 , pp. 946-950
    • Kraulis, P.J.1
  • 21
    • 0033912221 scopus 로고    scopus 로고
    • Precursors to the U3 small nucleolar RNA lack small nucleolar RNP proteins but are stabilized by La binding
    • Kufel J, Allmang C, Chanfreau G, Petfalski E, Lafontaine DL, Tollervey D (2000) Precursors to the U3 small nucleolar RNA lack small nucleolar RNP proteins but are stabilized by La binding. Mol Cell Biol 20: 5415-5424
    • (2000) Mol Cell Biol , vol.20 , pp. 5415-5424
    • Kufel, J.1    Allmang, C.2    Chanfreau, G.3    Petfalski, E.4    Lafontaine, D.L.5    Tollervey, D.6
  • 22
    • 0032055096 scopus 로고    scopus 로고
    • Efficient synthesis, termination, and release of RNA polymerase III transcripts in Xenopus extracts depleted of La protein
    • Lin-Marq N, Clarkson SG (1998) Efficient synthesis, termination, and release of RNA polymerase III transcripts in Xenopus extracts depleted of La protein. EMBO J 17: 2033-2041
    • (1998) EMBO J , vol.17 , pp. 2033-2041
    • Lin-Marq, N.1    Clarkson, S.G.2
  • 23
    • 0035163788 scopus 로고    scopus 로고
    • Phosphorylation of the Saccharomyces cerevisiae La protein does not appear to be required for its function in tRNA maturation and nascent RNA stabilization
    • Long SK, Cedervall T, Walch-Solimena C, Noe DA, Huddleston MI, Annan RS, Wolin SL (2001) Phosphorylation of the Saccharomyces cerevisiae La protein does not appear to be required for its function in tRNA maturation and nascent RNA stabilization. RNA 7: 1589-1602
    • (2001) RNA , vol.7 , pp. 1589-1602
    • Long, S.K.1    Cedervall, T.2    Walch-Solimena, C.3    Noe, D.A.4    Huddleston, M.I.5    Annan, R.S.6    Wolin, S.L.7
  • 24
    • 0029865152 scopus 로고    scopus 로고
    • Transcription termination factor La is also an initiation factor for RNA polymerase III
    • Maraia RJ (1996) Transcription termination factor La is also an initiation factor for RNA polymerase III. Proc Natl Acad Sci USA 93: 3383-3387
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 3383-3387
    • Maraia, R.J.1
  • 25
    • 0035164019 scopus 로고    scopus 로고
    • Recognition of nascent RNA by the human La antigen: Conserved and divergent features of structure and function
    • Maraia RJ, Intine RV (2001) Recognition of nascent RNA by the human La antigen: conserved and divergent features of structure and function. Mol Cell Biol 21: 367-379
    • (2001) Mol Cell Biol , vol.21 , pp. 367-379
    • Maraia, R.J.1    Intine, R.V.2
  • 26
    • 0034065043 scopus 로고    scopus 로고
    • Import of proteins into the trypanosome nucleus and their distribution at karyogenesis
    • Marchetti MA, Tschudi C, Kwon H, Wolin SL, Ullu E (2000) Import of proteins into the trypanosome nucleus and their distribution at karyogenesis. J Cell Sci 113: 899-906
    • (2000) J Cell Sci , vol.113 , pp. 899-906
    • Marchetti, M.A.1    Tschudi, C.2    Kwon, H.3    Wolin, S.L.4    Ullu, E.5
  • 27
    • 0016178310 scopus 로고
    • Heterogeneity of RNA protein antigens reactive with sera of patients with systemic lupus erythematosus. Descriptions of a cytoplasmic nonribosomal antigen
    • Mattioli M, Reichlin M (1974) Heterogeneity of RNA protein antigens reactive with sera of patients with systemic lupus erythematosus. Descriptions of a cytoplasmic nonribosomal antigen. Arthritis Rheum 17: 421-429
    • (1974) Arthritis Rheum , vol.17 , pp. 421-429
    • Mattioli, M.1    Reichlin, M.2
  • 29
    • 0000495671 scopus 로고
    • Nucleotide sequence analysis of polyribonucleotides by means of periodate oxidation followed by cleavage with an amine
    • Neu HC, Heppel LA (1964) Nucleotide sequence analysis of polyribonucleotides by means of periodate oxidation followed by cleavage with an amine. J Biol Chem 237: 2927-2934
    • (1964) J Biol Chem , vol.237 , pp. 2927-2934
    • Neu, H.C.1    Heppel, L.A.2
  • 30
    • 0026319199 scopus 로고
    • Protein folding and association: Insights from the interfacial and thermodynamic properties of hydrocarbons
    • Nicholls A, Sharp KA, Honig B (1991) Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons. Proteins 11: 281-296
    • (1991) Proteins , vol.11 , pp. 281-296
    • Nicholls, A.1    Sharp, K.A.2    Honig, B.3
  • 31
    • 0035920207 scopus 로고    scopus 로고
    • Contribution of the individual domains in human La protein and its RNA 3′ end-binding activity
    • Ohndorf U-M, Steegborn C, Knijff R, Sondermann P (2001) Contribution of the individual domains in human La protein and its RNA 3′ end-binding activity. J Biol Chem 276: 27188-27196
    • (2001) J Biol Chem , vol.276 , pp. 27188-27196
    • Ohndorf, U.-M.1    Steegborn, C.2    Knijff, R.3    Sondermann, P.4
  • 32
    • 0031059866 scopus 로고    scopus 로고
    • Processing X-ray diffraction data collected in oscillation mode
    • CW Carter, RM Sweet (eds). New York: Academic Press
    • Otwinowski Z, Minor W (1997) Processing X-ray diffraction data collected in oscillation mode. In Macromolecular Crystallography, CW Carter, RM Sweet (eds) Vol. 276, pp -326. New York: Academic Press
    • (1997) Macromolecular Crystallography , vol.276 , pp. 326
    • Otwinowski, Z.1    Minor, W.2
  • 33
    • 0032535451 scopus 로고    scopus 로고
    • A role for the yeast La protein in U6 snRNP assembly: Evidence that the La protein is a molecular chaperone for RNA polymerase III transcripts
    • Pannone BK, Xue D, Wolin SL (1998) A role for the yeast La protein in U6 snRNP assembly: evidence that the La protein is a molecular chaperone for RNA polymerase III transcripts. EMBO J 17: 7442-7453
    • (1998) EMBO J , vol.17 , pp. 7442-7453
    • Pannone, B.K.1    Xue, D.2    Wolin, S.L.3
  • 34
    • 0031059783 scopus 로고    scopus 로고
    • Practical cryocrystallography
    • CW Carter and RM Sweet (eds). New York: Academic Press
    • Rodgers D (1997) Practical cryocrystallography. In Methods in Enzymology, CW Carter and RM Sweet (eds) Vol. 276, pp 183-202. New York: Academic Press
    • (1997) Methods in Enzymology , vol.276 , pp. 183-202
    • Rodgers, D.1
  • 35
    • 0036682596 scopus 로고    scopus 로고
    • Crystal structure of an mRNA-binding fragment of Moorella thermoacetica elongation factor SelB
    • Selmer M, Su X-D (2002) Crystal structure of an mRNA-binding fragment of Moorella thermoacetica elongation factor SelB. EMBO J 21: 4145-4155
    • (2002) EMBO J , vol.21 , pp. 4145-4155
    • Selmer, M.1    Su, X.-D.2
  • 36
    • 0032745787 scopus 로고    scopus 로고
    • Two yeast La motif-containing proteins are RNA-binding proteins that associate with polyribosomes
    • Sobel SG, Wolin SL (1999) Two yeast La motif-containing proteins are RNA-binding proteins that associate with polyribosomes. Mol Biol Cell 10: 3849-3862
    • (1999) Mol Biol Cell , vol.10 , pp. 3849-3862
    • Sobel, S.G.1    Wolin, S.L.2
  • 37
    • 0021305722 scopus 로고
    • Purified lupus antigen La recognizes an oligouridylate stretch common to the 3′ termini of RNA polymerase III transcripts
    • Stefano JE (1984) Purified lupus antigen La recognizes an oligouridylate stretch common to the 3′ termini of RNA polymerase III transcripts. Cell 36: 145-154
    • (1984) Cell , vol.36 , pp. 145-154
    • Stefano, J.E.1
  • 38
    • 0031469506 scopus 로고    scopus 로고
    • The La protein in Schizosaccharomyces pombe: A conserved yet dispensible phosphoprotein that functions in tRNA maturation
    • Van Horn DJ, Yoo CJ, Xue D, Shi H, Wolin SL (1997) The La protein in Schizosaccharomyces pombe: a conserved yet dispensible phosphoprotein that functions in tRNA maturation. RNA 3: 1434-1443
    • (1997) RNA , vol.3 , pp. 1434-1443
    • Van Horn, D.J.1    Yoo, C.J.2    Xue, D.3    Shi, H.4    Wolin, S.L.5
  • 39
    • 0031860374 scopus 로고    scopus 로고
    • RNA recognition by RNP proteins during RNA processing
    • Varani G, Nagai K (1998) RNA recognition by RNP proteins during RNA processing. Annu Rev Biophys Biomol Struct 27: 407-445
    • (1998) Annu Rev Biophys Biomol Struct , vol.27 , pp. 407-445
    • Varani, G.1    Nagai, K.2
  • 42
    • 0031576363 scopus 로고    scopus 로고
    • Solution structure of the first three Zinc fingers of TFIIIA bound to the cognate DNA sequence: Determinants of affinity and sequence specificity
    • Wuttke DS, Foster MP, Case DA, Gottesfeld JM, Wright PE (1997) Solution structure of the first three Zinc fingers of TFIIIA bound to the cognate DNA sequence: determinants of affinity and sequence specificity. J Mol Biol 273: 183-206
    • (1997) J Mol Biol , vol.273 , pp. 183-206
    • Wuttke, D.S.1    Foster, M.P.2    Case, D.A.3    Gottesfeld, J.M.4    Wright, P.E.5
  • 44
    • 0024828050 scopus 로고
    • Synthesis of long, capped transcripts in vitro by SP6 and T7 RNA polymerases
    • Yisraeli JK, Melton DA (1989) Synthesis of long, capped transcripts in vitro by SP6 and T7 RNA polymerases. Methods Enzymol 180: 42-50
    • (1989) Methods Enzymol , vol.180 , pp. 42-50
    • Yisraeli, J.K.1    Melton, D.A.2
  • 45
    • 0028017605 scopus 로고
    • La proteins from Drosophila melanogaster and Saccharomyces cerevisiae: A yeast homolog of the La autoantigen is dispensible for growth
    • Yoo CJ, Wolin SL (1994) La proteins from Drosophila melanogaster and Saccharomyces cerevisiae: a yeast homolog of the La autoantigen is dispensible for growth. Mol Cell Biol 14: 5412-5424
    • (1994) Mol Cell Biol , vol.14 , pp. 5412-5424
    • Yoo, C.J.1    Wolin, S.L.2
  • 46
    • 0030904723 scopus 로고    scopus 로고
    • The yeast La protein is required for the 3′ endonucleolytic cleavage that matures tRNA precursors
    • Yoo CJ, Wolin SL (1997) The yeast La protein is required for the 3′ endonucleolytic cleavage that matures tRNA precursors. Cell 89: 393-402
    • (1997) Cell , vol.89 , pp. 393-402
    • Yoo, C.J.1    Wolin, S.L.2


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