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Volumn 11, Issue 5, 2001, Pages 850-862

Human-ovine comparative sequencing of a 250-kb imprinted domain encompassing the callipyge (clpg) locus and identification of six imprinted transcripts: DLK1, DAT, GTL2, PEG11, antiPEG11, and MEG8

Author keywords

[No Author keywords available]

Indexed keywords

DELTA LIKE 1 ASSOCIATED PROTEIN; DELTA LIKE 1 PROTEIN; GENE PRODUCT; MEMBRANE PROTEIN; PROTEIN ANTIPEG11; PROTEIN CALLIPYGE; PROTEIN GTL2; PROTEIN MEG8; PROTEIN PEG11; UNCLASSIFIED DRUG;

EID: 17744365941     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.172701     Document Type: Letter
Times cited : (177)

References (37)
  • 2
    • 0035128059 scopus 로고    scopus 로고
    • Breakpoint mapping positions the callipyge gene within a 285 kilobase chromosome segment containing the Gtl-2 gene
    • Berghmans, S., Segers, K., Shay, T., Georges, M., Cockett, N. E. and Charlier, C. 2001. Breakpoint mapping positions the callipyge gene within a 285 kilobase chromosome segment containing the Gtl-2 gene. Mamm. Genome 12: 183-185.
    • (2001) Mamm. Genome , vol.12 , pp. 183-185
    • Berghmans, S.1    Segers, K.2    Shay, T.3    Georges, M.4    Cockett, N.E.5    Charlier, C.6
  • 3
    • 0029587471 scopus 로고
    • The human genome: Organization and evolutionary history
    • Bernardi, G. 1995. The human genome: Organization and evolutionary history. Annu. Rev. Genet. 29: 445-476.
    • (1995) Annu. Rev. Genet. , vol.29 , pp. 445-476
    • Bernardi, G.1
  • 4
    • 0031586003 scopus 로고    scopus 로고
    • Prediction of complete gene structures in human genomic DNA
    • Burge, C. and Karlin, S. 1997. Prediction of complete gene structures in human genomic DNA. J. Mol. Biol. 268: 78-94.
    • (1997) J. Mol. Biol. , vol.268 , pp. 78-94
    • Burge, C.1    Karlin, S.2
  • 5
    • 0028264793 scopus 로고
    • Chromosomal localisation of the callipyge gene in sheep (Ovis aries) using bovine DNA markers
    • Cockett, N.E., Jackson, S.P., Shay, T.L., Nielsen, D., Green, R.D., and Georges, M. 1994. Chromosomal localisation of the callipyge gene in sheep (Ovis aries) using bovine DNA markers. Proc. Natl. Acad. Sci. 91: 3019-3023.
    • (1994) Proc. Natl. Acad. Sci. , vol.91 , pp. 3019-3023
    • Cockett, N.E.1    Jackson, S.P.2    Shay, T.L.3    Nielsen, D.4    Green, R.D.5    Georges, M.6
  • 7
    • 0030076302 scopus 로고    scopus 로고
    • Histology and composition of muscles from normal and callipyge lambs
    • Carpenter, C.E., Rice, O.D., Cockett, N.E., and Snowder, G.D. 1996. Histology and composition of muscles from normal and callipyge lambs. J. Anim. Sci. 74: 388-393.
    • (1996) J. Anim. Sci. , vol.74 , pp. 388-393
    • Carpenter, C.E.1    Rice, O.D.2    Cockett, N.E.3    Snowder, G.D.4
  • 8
    • 0031978181 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using PHRED II. Error probabilities
    • Ewing, B. and Green, P. 1998. Base-calling of automated sequencer traces using PHRED II. Error probabilities. Genome Res. 8:186-194.
    • (1998) Genome Res. , vol.8 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 9
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using PHRED I Accuracy assessment
    • Ewing, B., Hillier, L., Wendl, M.C., and Green, P. 1998. Base-calling of automated sequencer traces using PHRED I Accuracy assessment. Genome Res. 8: 175-185.
    • (1998) Genome Res. , vol.8 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 13
    • 0032176085 scopus 로고    scopus 로고
    • Evaluation of the ovine callipyge locus: II. Genotypic effects on growth, slaughter, and carcass traits
    • Freking, B.A., Keele, J.W., Nielsen, M.K., and Leymaster, K.A. 1998b. Evaluation of the ovine callipyge locus: II. Genotypic effects on growth, slaughter, and carcass traits. J. Anim. Sci. 76: 2549-2559.
    • (1998) J. Anim. Sci. , vol.76 , pp. 2549-2559
    • Freking, B.A.1    Keele, J.W.2    Nielsen, M.K.3    Leymaster, K.A.4
  • 15
    • 0023216891 scopus 로고
    • CpG islands in vertebrate genomes
    • Gardiner-Garden, M. and Frommer, M. 1987. CpG islands in vertebrate genomes. J Mol. Biol. 196: 261-282.
    • (1987) J Mol. Biol. , vol.196 , pp. 261-282
    • Gardiner-Garden, M.1    Frommer, M.2
  • 16
    • 0031955116 scopus 로고    scopus 로고
    • CONSED: A graphical tool for sequence finishing
    • Gordon, D., Abajian, C., and Green, P. 1998. CONSED: A graphical tool for sequence finishing. Genome Res. 8: 195-202.
    • (1998) Genome Res. , vol.8 , pp. 195-202
    • Gordon, D.1    Abajian, C.2    Green, P.3
  • 17
    • 0030638548 scopus 로고    scopus 로고
    • Phenotypic characterization of Rambouillet sheep expressing the callipyge gene: I. Inheritance of the condition and production
    • Jackson, S.P., Green, R.D., and Miller, M.F. 1997a. Phenotypic characterization of Rambouillet sheep expressing the callipyge gene: I. Inheritance of the condition and production. J. Anim. Sci. 75: 14-21.
    • (1997) J. Anim. Sci. , vol.75 , pp. 14-21
    • Jackson, S.P.1    Green, R.D.2    Miller, M.F.3
  • 18
    • 0030640884 scopus 로고    scopus 로고
    • Phenotypic characterization of Rambouillet sheep expressing the callipyge gene: II. Carcass characteristics and retail yield
    • Jackson, S.P., Miller, M.F., and Green, R.D. 1997b. Phenotypic characterization of Rambouillet sheep expressing the callipyge gene: II. Carcass characteristics and retail yield. J. Anim. Sci. 75: 125-132.
    • (1997) J. Anim. Sci. , vol.75 , pp. 125-132
    • Jackson, S.P.1    Miller, M.F.2    Green, R.D.3
  • 19
    • 0030635511 scopus 로고    scopus 로고
    • Phenotypic characterization of Rambouillet sheep expressing the callipyge gene: III. Muscle weights and muscle weight distribution
    • Jackson, S.P., Miller, M.F., and Green, R.D. 1997c. Phenotypic characterization of Rambouillet sheep expressing the callipyge gene: III. Muscle weights and muscle weight distribution. J. Anim. Sci. 75: 133-139.
    • (1997) J. Anim. Sci. , vol.75 , pp. 133-139
    • Jackson, S.P.1    Miller, M.F.2    Green, R.D.3
  • 20
    • 0033971947 scopus 로고    scopus 로고
    • The role of epidermal growth factor-like protein DLK in cell differentiation
    • Laborda, J. 2000. The role of epidermal growth factor-like protein DLK in cell differentiation. Histol. Histopathol. 15: 119-129.
    • (2000) Histol. Histopathol. , vol.15 , pp. 119-129
    • Laborda, J.1
  • 21
    • 0026742792 scopus 로고
    • CpG islands as gene markers in the human genome
    • Larsen, F., Gundersen, G., Lopez, R., and Prydz, H. 1992. CpG islands as gene markers in the human genome. Genomics 13: 1095-1107.
    • (1992) Genomics , vol.13 , pp. 1095-1107
    • Larsen, F.1    Gundersen, G.2    Lopez, R.3    Prydz, H.4
  • 22
    • 0028961044 scopus 로고
    • DLK, pG2 and Pref1 mRNAs encode similar proteins belonging to the EGF-like superfamily. Identification of polymorphic variants of this RNA
    • Lee, Y.L., Helman, L., Hoffman, T., and Laborda, J. 1995. DLK, pG2 and Pref1 mRNAs encode similar proteins belonging to the EGF-like superfamily. Identification of polymorphic variants of this RNA. Biochim. Biophys. Acta 1261: 223-232.
    • (1995) Biochim. Biophys. Acta , vol.1261 , pp. 223-232
    • Lee, Y.L.1    Helman, L.2    Hoffman, T.3    Laborda, J.4
  • 24
    • 6744221197 scopus 로고    scopus 로고
    • Identification of an imprinted gene, Meg3/Gtl2 and its human homologue MEG3, first mapped on mouse distal chromosome 12 and human chromosome 14q
    • Miyoshi, N., Wagatsuma, H., Wakana, S., Shiroishi, T., Nomura, M., Aisaka, K., Kohda, T., Surani, M., Kaneko-Ishino, T., and Ishino, F. 2000. Identification of an imprinted gene, Meg3/Gtl2 and its human homologue MEG3, first mapped on mouse distal chromosome 12 and human chromosome 14q. Genes Cells 5:211-220.
    • (2000) Genes Cells , vol.5 , pp. 211-220
    • Miyoshi, N.1    Wagatsuma, H.2    Wakana, S.3    Shiroishi, T.4    Nomura, M.5    Aisaka, K.6    Kohda, T.7    Surani, M.8    Kaneko-Ishino, T.9    Ishino, F.10
  • 25
    • 0014757386 scopus 로고
    • A general method applicable to the search for similarities in the amino acid sequence of two proteins
    • Needleman, S.B. and Wunsch, C.D. 1970. A general method applicable to the search for similarities in the amino acid sequence of two proteins. J. Mol. Biol. 48: 443-453.
    • (1970) J. Mol. Biol. , vol.48 , pp. 443-453
    • Needleman, S.B.1    Wunsch, C.D.2
  • 27
    • 0029678009 scopus 로고    scopus 로고
    • GTL2lacz, an insertional mutation on mouse chromosome 12 with parental origin dependent phenotype
    • Schuster-Gossler, K., Simon, D., Guénet, J.-L., Zachgo, J. and Gossler, A. 1996. GTL2lacz, an insertional mutation on mouse chromosome 12 with parental origin dependent phenotype. Mamm. Genome 7: 20-24.
    • (1996) Mamm. Genome , vol.7 , pp. 20-24
    • Schuster-Gossler, K.1    Simon, D.2    Guénet, J.-L.3    Zachgo, J.4    Gossler, A.5
  • 28
    • 0031779540 scopus 로고    scopus 로고
    • The mouse gtl2 gene is differentially expressed during embryonic development, encodes multiple alternatively spliced transcripts, and may act as an RNA
    • Schuster-Gossler, K., Bilinski, P. Sado T., Ferguson-Smith A. and Gossler A. 1998. The mouse gtl2 gene is differentially expressed during embryonic development, encodes multiple alternatively spliced transcripts, and may act as an RNA. Dev. Dyn. 212: 214-228.
    • (1998) Dev. Dyn. , vol.212 , pp. 214-228
    • Schuster-Gossler, K.1    Bilinski, P.2    Sado, T.3    Ferguson-Smith, A.4    Gossler, A.5
  • 29
  • 32
    • 0028142406 scopus 로고
    • Structural characterization and alternate splicing of the gene encoding the preadipocyte EGF-like protein Pref-1
    • Smas, C.M., Green D., and Sul, H.S. 1994. Structural characterization and alternate splicing of the gene encoding the preadipocyte EGF-like protein Pref-1. Biochemistry 33: 9257-9265.
    • (1994) Biochemistry , vol.33 , pp. 9257-9265
    • Smas, C.M.1    Green, D.2    Sul, H.S.3
  • 33
    • 0031046071 scopus 로고    scopus 로고
    • Cleavage of membrane-associated pref-1 generates a soluble inhibitor of adipocyte differentiation
    • Smas, C.M., Chen, L., and Sul, H.S. 1997. Cleavage of membrane-associated pref-1 generates a soluble inhibitor of adipocyte differentiation. Mol. Cell. Biol. 17: 977-988.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 977-988
    • Smas, C.M.1    Chen, L.2    Sul, H.S.3
  • 34
    • 0032784908 scopus 로고    scopus 로고
    • Interspersed repeats and other mementos of transposable elements in mammalian genomes
    • Smit, A.F.A. 1999. Interspersed repeats and other mementos of transposable elements in mammalian genomes. Curr. Opin. Genet. Dev. 9: 657-663.
    • (1999) Curr. Opin. Genet. Dev. , vol.9 , pp. 657-663
    • Smit, A.F.A.1
  • 35
    • 0343936580 scopus 로고    scopus 로고
    • RepeatMasker server on World Wide Web.
    • Smit, A.F.A. and Green, P. 2000. RepeatMasker server on World Wide Web. http://repeatmasker.genome.washington.edu.
    • (2000)
    • Smit, A.F.A.1    Green, P.2
  • 36
    • 0034699324 scopus 로고    scopus 로고
    • Dlk (Delta-like) and Gtl2 are closely linked reciprocally imprinted genes on mouse chromosome 12 and are paternally methylated and co-expressed during development
    • Takada, S., Tevendale, M., Baker, J., Georgiades, P., Campbell, E., Freeman, T., Johnson, M.H., Paulsen, M., and Ferguson-Smith, A.C. 2000. Dlk (Delta-like) and Gtl2 are closely linked reciprocally imprinted genes on mouse chromosome 12 and are paternally methylated and co-expressed during development. Curr. Biol. 10: 1135-1138.
    • (2000) Curr. Biol. , vol.10 , pp. 1135-1138
    • Takada, S.1    Tevendale, M.2    Baker, J.3    Georgiades, P.4    Campbell, E.5    Freeman, T.6    Johnson, M.H.7    Paulsen, M.8    Ferguson-Smith, A.C.9
  • 37
    • 0033665434 scopus 로고    scopus 로고
    • Novel imprinted DLK1/GTL2 domain on human chromosome 14 contains motifs that mimic those implicated in IGF2/H19 regulation
    • Wylie, A.A., Murphy, S.K., Orton, T.C., and Jirtle, R.L. 2000. Novel imprinted DLK1/GTL2 domain on human chromosome 14 contains motifs that mimic those implicated in IGF2/H19 regulation. Genome Res. 10: 1711-1718.
    • (2000) Genome Res. , vol.10 , pp. 1711-1718
    • Wylie, A.A.1    Murphy, S.K.2    Orton, T.C.3    Jirtle, R.L.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.