-
1
-
-
0023176681
-
Determinants of a protein fold. Unique features of the globin amino acid sequences
-
Bashford, D., Chothia, C., and Lesk, A.M. (1987) Determinants of a protein fold. Unique features of the globin amino acid sequences. J. Mol. Biol. 196, 199-216.
-
(1987)
J. Mol. Biol.
, vol.196
, pp. 199-216
-
-
Bashford, D.1
Chothia, C.2
Lesk, A.M.3
-
2
-
-
0027284068
-
Adventitious variability? The amino acid sequences of nonvertebrate globins
-
Vinogradov, S., Walz, D., Pohajdak, B., Moens, L., Kapp, O.H., Suzuki, T., and Trotman, C. (1993) Adventitious variability? The amino acid sequences of nonvertebrate globins. Comp. Biochem. Physiol. 106B, 1-26.
-
(1993)
Comp. Biochem. Physiol.
, vol.106 B
, pp. 1-26
-
-
Vinogradov, S.1
Walz, D.2
Pohajdak, B.3
Moens, L.4
Kapp, O.H.5
Suzuki, T.6
Trotman, C.7
-
4
-
-
0000870242
-
Leghemoglobin and Rhizobium respiration
-
Appleby, C. A. (1984) Leghemoglobin and Rhizobium Respiration. Ann. Rev. Plant Physiol. 35, 443-478.
-
(1984)
Ann. Rev. Plant Physiol.
, vol.35
, pp. 443-478
-
-
Appleby, C.A.1
-
5
-
-
0000462106
-
The origin and functions of haemoglobin in plants
-
Appleby, C. A. (1992) The origin and functions of haemoglobin in plants. Sci. Progress 76, 365-398.
-
(1992)
Sci. Progress
, vol.76
, pp. 365-398
-
-
Appleby, C.A.1
-
6
-
-
0024961605
-
The kinetics of ligand binding to plant hemoglobins. Structural implications
-
Gibson, Q. H., Wittenberg, J. B., Wittenberg, B. A., Bogusz, D., and Appleby, C. A. (1989) The kinetics of ligand binding to plant hemoglobins. Structural implications. J. Biol. Chem. 264, 100-107.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 100-107
-
-
Gibson, Q.H.1
Wittenberg, J.B.2
Wittenberg, B.A.3
Bogusz, D.4
Appleby, C.A.5
-
7
-
-
0028241788
-
Heme-based sensors, exemplified by the kinase FixL, are a new class of heme protein with distinctive ligand binding and autoxidation
-
Gilles-Gonzalez, M. A., Gonzalez, G., Perutz, M. F., Kiger, L., Marden, M. C., and Poyart, C. (1994) Heme-based sensors, exemplified by the kinase FixL, are a new class of heme protein with distinctive ligand binding and autoxidation. Biochemistry 33, 8067-8073.
-
(1994)
Biochemistry
, vol.33
, pp. 8067-8073
-
-
Gilles-Gonzalez, M.A.1
Gonzalez, G.2
Perutz, M.F.3
Kiger, L.4
Marden, M.C.5
Poyart, C.6
-
8
-
-
0026596559
-
Polar zipper sequence in the high-affinity hemoglobin of Ascaris suum: Amino acid sequence and structural interpretation
-
De Baere, I., Liu, L., Moens, L., Van Beeumen, J., Gielens, V., Richelle, J., Trotman, C., Finch, J., Gerstein, M., and Perutz, M. (1992) Polar zipper sequence in the high-affinity hemoglobin of Ascaris suum: amino acid sequence and structural interpretation. Proc. Natl. Acad. Sci. USA 89, 4638-4642.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 4638-4642
-
-
De Baere, I.1
Liu, L.2
Moens, L.3
Van Beeumen, J.4
Gielens, V.5
Richelle, J.6
Trotman, C.7
Finch, J.8
Gerstein, M.9
Perutz, M.10
-
9
-
-
0027183567
-
Nemoglobins: Divergent nematode globins
-
Blaxter, M. L. (1993) Nemoglobins: Divergent nematode globins. Parasitology Today 9, 353-360.
-
(1993)
Parasitology Today
, vol.9
, pp. 353-360
-
-
Blaxter, M.L.1
-
10
-
-
0000227447
-
Metabolism of haemoglobin and haematin compounds in Ascaris lumbricoides
-
Smith, M. H., and Lee, D. L. (1963) Metabolism of haemoglobin and haematin compounds in Ascaris lumbricoides. Proc. R. Soc. London Ser. B 157, 234-257.
-
(1963)
Proc. R. Soc. London Ser. B
, vol.157
, pp. 234-257
-
-
Smith, M.H.1
Lee, D.L.2
-
11
-
-
0012270785
-
A hemoglobin with an optical function
-
Burr, J. A. H., Hunt, P., Wagar, D. R., Dewilde, S., Blaxter, M. L., Vanfleteren, J. R., and Moens, L. (2000) A hemoglobin with an optical function. J. Biol. Chem. 275, 4810-4815.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 4810-4815
-
-
Burr, J.A.H.1
Hunt, P.2
Wagar, D.R.3
Dewilde, S.4
Blaxter, M.L.5
Vanfleteren, J.R.6
Moens, L.7
-
12
-
-
0034726874
-
A vertebrate globin expressed in the brain
-
Burmester, T., Weich, B., Reinhardt, S., and Hankeln, T. (2000) A vertebrate globin expressed in the brain. Nature 407, 520-523.
-
(2000)
Nature
, vol.407
, pp. 520-523
-
-
Burmester, T.1
Weich, B.2
Reinhardt, S.3
Hankeln, T.4
-
13
-
-
0037449744
-
How does the eye breathe? Evidence for neuroglobin-mediated oxygen supply in the mammalian retina
-
Schmidt, M., Giessl, A., Laufs, T., Hankeln, T., Wofrum, U., and Burmester, T. (2003) How does the eye breathe? Evidence for neuroglobin-mediated oxygen supply in the mammalian retina. J. Biol. Chem. 278, 1932-1935.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 1932-1935
-
-
Schmidt, M.1
Giessl, A.2
Laufs, T.3
Hankeln, T.4
Wofrum, U.5
Burmester, T.6
-
14
-
-
3042727978
-
Neuroglobin: A respiratory protein of the nervous system
-
Burmester, T., and Hankeln, T. (2004) Neuroglobin: A respiratory protein of the nervous system. News Physiol. Sci. 19, 110-113.
-
(2004)
News Physiol. Sci.
, vol.19
, pp. 110-113
-
-
Burmester, T.1
Hankeln, T.2
-
15
-
-
10744220623
-
Cytoglobin is a respiratory protein expressed in connective tissue and neurons that is up-regulated by hypoxia
-
Schmidt, M., Gerlach, F., Avivi, A., Laufs, T., Wystub, S., Simpson, J. C., Nevo, E., Saaler-Reinhardt, S., Reuss, S., Hankeln, T., and Burmester, T. (2004) Cytoglobin is a respiratory protein expressed in connective tissue and neurons that is up-regulated by hypoxia. J. Biol. Chem. 279, 8063-8069.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 8063-8069
-
-
Schmidt, M.1
Gerlach, F.2
Avivi, A.3
Laufs, T.4
Wystub, S.5
Simpson, J.C.6
Nevo, E.7
Saaler-Reinhardt, S.8
Reuss, S.9
Hankeln, T.10
Burmester, T.11
-
16
-
-
0035909992
-
Neuroglobin is up-regulated by and protects neurons from hypoxicischemic injury
-
Sun, Y., Jin, K., Mao, X. O., Zhu, I., and Greenberg, D. A. (2001) Neuroglobin is up-regulated by and protects neurons from hypoxicischemic injury. Proc. Natl Acad. Sci. USA 98, 15306-15311.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 15306-15311
-
-
Sun, Y.1
Jin, K.2
Mao, X.O.3
Zhu, I.4
Greenberg, D.A.5
-
17
-
-
0037452987
-
Neuroglobin protects the brain from experimental stroke in vivo
-
Sun, Y., Jin, K., Peel, A., Mao, X. O., Xie, L., and Greenberg, D. A. (2003) Neuroglobin protects the brain from experimental stroke in vivo. Proc. Natl. Acad. Sci. USA 100, 3497-3500.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 3497-3500
-
-
Sun, Y.1
Jin, K.2
Peel, A.3
Mao, X.O.4
Xie, L.5
Greenberg, D.A.6
-
18
-
-
2542447171
-
Reactivity studies of the Fe(III) and Fe(II)NO forms of human neuroglobin reveal a potential role against oxidative stress
-
Herold, S., Fago, A., Weber, R. E., Dewilde, S., and Moens, L. (2004) Reactivity studies of the Fe(III) and Fe(II)NO forms of human neuroglobin reveal a potential role against oxidative stress. J. Biol. Chem. 279, 22841-22847.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 22841-22847
-
-
Herold, S.1
Fago, A.2
Weber, R.E.3
Dewilde, S.4
Moens, L.5
-
19
-
-
10344243985
-
A globin gene from lower vertebrates of ancient evolutionary origin: Evidence for two distinct globin families in animals
-
Roesner, A., Fuchs, C. Hankeln, T., and Burmester, T. (2005) A globin gene from lower vertebrates of ancient evolutionary origin: Evidence for two distinct globin families in animals. Mol. Biol. Evol. 22, 12-20.
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 12-20
-
-
Roesner, A.1
Fuchs, C.2
Hankeln, T.3
Burmester, T.4
-
20
-
-
85047691361
-
Cytoglobin/STAP, its unique localization in splanchnic fibroblast-like cells and function in organ fibrogenesis
-
Nakatani, K., Okuyama, H., Shimahara, Y., Saeki, S., Kim, D. H., Nakajima, Y., Seki, S., Kawada, N., and Yoshizato, K. (2004) Cytoglobin/STAP, its unique localization in splanchnic fibroblast-like cells and function in organ fibrogenesis. Lab. Invest. 84, 90-101.
-
(2004)
Lab. Invest.
, vol.84
, pp. 90-101
-
-
Nakatani, K.1
Okuyama, H.2
Shimahara, Y.3
Saeki, S.4
Kim, D.H.5
Nakajima, Y.6
Seki, S.7
Kawada, N.8
Yoshizato, K.9
-
21
-
-
0032509302
-
Genome sequence of the nematode C. elegans: A platform for investigating biology
-
C. elegans Sequencing Consortium (1998) Genome sequence of the nematode C. elegans: A platform for investigating biology. Science 282, 2012-2018.
-
(1998)
Science
, vol.282
, pp. 2012-2018
-
-
-
22
-
-
4243088097
-
The genome sequence of Caenorhabditis briggsae: A platform for comparative genomics
-
Stein, L. D., Bao, Z., Blasiar, D., Blumenthal, D., Brent, M. R., Chen, N., Chinwalla, A., Clarke, L., Clee, C., Cohlan, A., Coulson, A., D'Eustachio, P., Fitch, D. H. A., Fulton, L. A., Fulton, R. E., Griffiths-Jones, S., Harris, T. W., Hilllier L. W., Kamath, R., Kuwabara, P. E., Mardis, E. R., Marra, M. A., Miner, T. L., Minx, P., Mullikin, J. C., Plumb, R. W., Rogers, J., Schein, J. E., Sohrmann, M., Spieth, J., Stajich, J. E., Xei, C., Willey, D., Wilson, R. K., Durbin, R., and Waterston, R. H. (2003) The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. Plos. Biol. 1, 166-192.
-
(2003)
Plos. Biol.
, vol.1
, pp. 166-192
-
-
Stein, L.D.1
Bao, Z.2
Blasiar, D.3
Blumenthal, D.4
Brent, M.R.5
Chen, N.6
Chinwalla, A.7
Clarke, L.8
Clee, C.9
Cohlan, A.10
Coulson, A.11
D'Eustachio, P.12
Fitch, D.H.A.13
Fulton, L.A.14
Fulton, R.E.15
Griffiths-Jones, S.16
Harris, T.W.17
Hilllier, L.W.18
Kamath, R.19
Kuwabara, P.E.20
Mardis, E.R.21
Marra, M.A.22
Miner, T.L.23
Minx, P.24
Mullikin, J.C.25
Plumb, R.W.26
Rogers, J.27
Schein, J.E.28
Sohrmann, M.29
Spieth, J.30
Stajich, J.E.31
Xei, C.32
Willey, D.33
Wilson, R.K.34
Durbin, R.35
Waterston, R.H.36
more..
-
23
-
-
0036132283
-
Assaying metabolic activity in ageing Caenorhabditis elegans
-
Braeckman, B. P., Houthoofd, K., De Vreese, A., and Vanfleteren, J. R. (2002) Assaying metabolic activity in ageing Caenorhabditis elegans. Mech. Ageing Dev. 123, 105-119.
-
(2002)
Mech. Ageing Dev.
, vol.123
, pp. 105-119
-
-
Braeckman, B.P.1
Houthoofd, K.2
De Vreese, A.3
Vanfleteren, J.R.4
-
24
-
-
0028225587
-
Production of age-synchronous mass cultures of Caenorhabditis elegans
-
Fabian, T. J., and Johnson, T. E. (1994) Production of age-synchronous mass cultures of Caenorhabditis elegans. J. Gerontol. Biol. Sci. 48, B145-B156.
-
(1994)
J. Gerontol. Biol. Sci.
, vol.48
-
-
Fabian, T.J.1
Johnson, T.E.2
-
25
-
-
0035798406
-
Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure
-
Gough, J., Karplus, K., Hughey, R., and Chothia, C. (2001) Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure. J. Mol. Biol. 313, 903-919.
-
(2001)
J. Mol. Biol.
, vol.313
, pp. 903-919
-
-
Gough, J.1
Karplus, K.2
Hughey, R.3
Chothia, C.4
-
26
-
-
0028843842
-
Alignment of 700 globin sequences: Extent of amino acid substitution and its correlation with variation in volume
-
Kapp, O. H., Moens, L., Vanfleteren, J., Trotman, C. N. A., Suzuki, T., and Vinogradov, S. N. (1995) Alignment of 700 globin sequences: Extent of amino acid substitution and its correlation with variation in volume. Protein Sci. 4, 2179-2190.
-
(1995)
Protein Sci.
, vol.4
, pp. 2179-2190
-
-
Kapp, O.H.1
Moens, L.2
Vanfleteren, J.3
Trotman, C.N.A.4
Suzuki, T.5
Vinogradov, S.N.6
-
27
-
-
0019332167
-
How different amino acid sequences determine similar protein structures: The structure and evolutionary dynamics of the globins
-
Lesk, A. M., and Chothia, C. (1980) How different amino acid sequences determine similar protein structures: the structure and evolutionary dynamics of the globins. J. Mol. Biol. 136, 225-270.
-
(1980)
J. Mol. Biol.
, vol.136
, pp. 225-270
-
-
Lesk, A.M.1
Chothia, C.2
-
28
-
-
0028221642
-
Volume changes in protein evolution
-
Gerstein, M., Sonnhammer, E. L. L., and Chothia, C. (1994) Volume changes in protein evolution. J. Mol. Biol. 236, 1067-1078.
-
(1994)
J. Mol. Biol.
, vol.236
, pp. 1067-1078
-
-
Gerstein, M.1
Sonnhammer, E.L.L.2
Chothia, C.3
-
29
-
-
0033954256
-
The Protein Data Bank
-
Berman, H. M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T. N., Weissig, H., Shindyalov, I. N., and Bourne, P. E. (2000) The Protein Data Bank. Nucleic Acids Res. 28, 235-242.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
30
-
-
0034213366
-
A novel two-over-two α-helical sandwich fold is characteristic of the truncated hemoglobin family
-
Pesce, A., Couture, M., Dewilde, S., Guertin, M., Yamauchi, K., Ascenzi, P., Moens, L., and Bolognesi, M. (2000) A novel two-over-two α-helical sandwich fold is characteristic of the truncated hemoglobin family. EMBO J. 19, 2424-2434.
-
(2000)
EMBO J.
, vol.19
, pp. 2424-2434
-
-
Pesce, A.1
Couture, M.2
Dewilde, S.3
Guertin, M.4
Yamauchi, K.5
Ascenzi, P.6
Moens, L.7
Bolognesi, M.8
-
31
-
-
0038624089
-
A TyrCD1/TrpG8 hydrogen bond network and a TyrB10TyrCD1 covalent link shape the heme distal site of Mycobacterium tuberculosis hemoglobin O
-
Milani, M., Savard, P. Y., Ouellet, H., Ascenzi, P., Guertin, M., and Bolognesi, M. (2003) A TyrCD1/TrpG8 hydrogen bond network and a TyrB10TyrCD1 covalent link shape the heme distal site of Mycobacterium tuberculosis hemoglobin O. Proc. Natl. Acad. Sci. USA 100, 5766-5771.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 5766-5771
-
-
Milani, M.1
Savard, P.Y.2
Ouellet, H.3
Ascenzi, P.4
Guertin, M.5
Bolognesi, M.6
-
32
-
-
0036139211
-
MEGA2: Molecular Evolutionary Genetics Analysis software
-
Kumar S., Tamura, K., Jakobsen, I. B., and Nei, M. (2001) MEGA2: Molecular Evolutionary Genetics Analysis software. Bioinformatics 17, 1244-1245.
-
(2001)
Bioinformatics
, vol.17
, pp. 1244-1245
-
-
Kumar, S.1
Tamura, K.2
Jakobsen, I.B.3
Nei, M.4
-
33
-
-
0038708337
-
C. elegans ORFeome version 1.1: Experimental verification of the genome annotation and resource for proteome-scale protein expression
-
Reboul, J., Vaglio, P., Rual, J. F., Lamesch, P., Martinez, M., Armstrong, C. M., Li, S., Jacotot, L., Bertin, N., Janky, R., Moore, T., Hudson, J. R., Hartley, J. L., Brasch, M. A., Vandenhaute, J., Boulton, S., Endress, G. A., Jenna, S., Chevet, E., Papasotiropoulos, V., Tolias, P. P., Ptacek, J., Snyder, M., Huang, R., Chance, M. R., Lee, H., Doucette-Stamm, L., Hill, D. E., and Vidal, M. (2003) C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Nat. Genet. 34, 35-41.
-
(2003)
Nat. Genet.
, vol.34
, pp. 35-41
-
-
Reboul, J.1
Vaglio, P.2
Rual, J.F.3
Lamesch, P.4
Martinez, M.5
Armstrong, C.M.6
Li, S.7
Jacotot, L.8
Bertin, N.9
Janky, R.10
Moore, T.11
Hudson, J.R.12
Hartley, J.L.13
Brasch, M.A.14
Vandenhaute, J.15
Boulton, S.16
Endress, G.A.17
Jenna, S.18
Chevet, E.19
Papasotiropoulos, V.20
Tolias, P.P.21
Ptacek, J.22
Snyder, M.23
Huang, R.24
Chance, M.R.25
Lee, H.26
Doucette-Stamm, L.27
Hill, D.E.28
Vidal, M.29
more..
-
34
-
-
0035868890
-
Regulation of DAF-2 receptor signaling by human insulin and ins-1, a member of the unusually large and diverse C. elegans insulin gene family
-
Pierce, S. B., Costa, M., Wisotzkey, R., Devadhar, S., Homburger, S. A., Buchman, A. R., Ferguson, K. C., Heller, J., Platt, D. M., Pasquinelli, A. A., Liu, L. X., Doberstein, S. K. and Ruvkun G. (2001) Regulation of DAF-2 receptor signaling by human insulin and ins-1, a member of the unusually large and diverse C. elegans insulin gene family. Genes Dev. 15, 672-686.
-
(2001)
Genes Dev.
, vol.15
, pp. 672-686
-
-
Pierce, S.B.1
Costa, M.2
Wisotzkey, R.3
Devadhar, S.4
Homburger, S.A.5
Buchman, A.R.6
Ferguson, K.C.7
Heller, J.8
Platt, D.M.9
Pasquinelli, A.A.10
Liu, L.X.11
Doberstein, S.K.12
Ruvkun, G.13
-
35
-
-
17444450739
-
The astacin protein family in Caenorhabditis elegans
-
Möhrlen, F., Hutter, H., and Zwilling, R. (2003) The astacin protein family in Caenorhabditis elegans. Eur. J. Biochem. 270, 4909-4920.
-
(2003)
Eur. J. Biochem.
, vol.270
, pp. 4909-4920
-
-
Möhrlen, F.1
Hutter, H.2
Zwilling, R.3
-
36
-
-
0028849827
-
Developmental expression pattern screen for genes in the C. elegans genome sequencing project
-
Lynch, A. S., Briggs, D. A., and Hope, I. A. (1995) Developmental expression pattern screen for genes in the C. elegans genome sequencing project. Nat. Genet. 11, 309-313.
-
(1995)
Nat. Genet.
, vol.11
, pp. 309-313
-
-
Lynch, A.S.1
Briggs, D.A.2
Hope, I.A.3
|