메뉴 건너뛰기




Volumn 56, Issue 11-12, 2004, Pages 697-702

Genome-wide analysis of the globin gene family of C. elegans

Author keywords

Caenorhabditis elegans; Globins; Oxygen affinity

Indexed keywords

GLOBIN;

EID: 17144377493     PISSN: 15216543     EISSN: None     Source Type: Journal    
DOI: 10.1080/15216540500037562     Document Type: Conference Paper
Times cited : (24)

References (36)
  • 1
    • 0023176681 scopus 로고
    • Determinants of a protein fold. Unique features of the globin amino acid sequences
    • Bashford, D., Chothia, C., and Lesk, A.M. (1987) Determinants of a protein fold. Unique features of the globin amino acid sequences. J. Mol. Biol. 196, 199-216.
    • (1987) J. Mol. Biol. , vol.196 , pp. 199-216
    • Bashford, D.1    Chothia, C.2    Lesk, A.M.3
  • 3
    • 0037933181 scopus 로고    scopus 로고
    • Myoglobin function reassessed
    • Wittenberg, J. W., and Wittenberg, B. A. (2003) Myoglobin function reassessed. J. Exp. Biol. 206, 2011-2020.
    • (2003) J. Exp. Biol. , vol.206 , pp. 2011-2020
    • Wittenberg, J.W.1    Wittenberg, B.A.2
  • 4
    • 0000870242 scopus 로고
    • Leghemoglobin and Rhizobium respiration
    • Appleby, C. A. (1984) Leghemoglobin and Rhizobium Respiration. Ann. Rev. Plant Physiol. 35, 443-478.
    • (1984) Ann. Rev. Plant Physiol. , vol.35 , pp. 443-478
    • Appleby, C.A.1
  • 5
    • 0000462106 scopus 로고
    • The origin and functions of haemoglobin in plants
    • Appleby, C. A. (1992) The origin and functions of haemoglobin in plants. Sci. Progress 76, 365-398.
    • (1992) Sci. Progress , vol.76 , pp. 365-398
    • Appleby, C.A.1
  • 7
    • 0028241788 scopus 로고
    • Heme-based sensors, exemplified by the kinase FixL, are a new class of heme protein with distinctive ligand binding and autoxidation
    • Gilles-Gonzalez, M. A., Gonzalez, G., Perutz, M. F., Kiger, L., Marden, M. C., and Poyart, C. (1994) Heme-based sensors, exemplified by the kinase FixL, are a new class of heme protein with distinctive ligand binding and autoxidation. Biochemistry 33, 8067-8073.
    • (1994) Biochemistry , vol.33 , pp. 8067-8073
    • Gilles-Gonzalez, M.A.1    Gonzalez, G.2    Perutz, M.F.3    Kiger, L.4    Marden, M.C.5    Poyart, C.6
  • 9
    • 0027183567 scopus 로고
    • Nemoglobins: Divergent nematode globins
    • Blaxter, M. L. (1993) Nemoglobins: Divergent nematode globins. Parasitology Today 9, 353-360.
    • (1993) Parasitology Today , vol.9 , pp. 353-360
    • Blaxter, M.L.1
  • 10
    • 0000227447 scopus 로고
    • Metabolism of haemoglobin and haematin compounds in Ascaris lumbricoides
    • Smith, M. H., and Lee, D. L. (1963) Metabolism of haemoglobin and haematin compounds in Ascaris lumbricoides. Proc. R. Soc. London Ser. B 157, 234-257.
    • (1963) Proc. R. Soc. London Ser. B , vol.157 , pp. 234-257
    • Smith, M.H.1    Lee, D.L.2
  • 12
    • 0034726874 scopus 로고    scopus 로고
    • A vertebrate globin expressed in the brain
    • Burmester, T., Weich, B., Reinhardt, S., and Hankeln, T. (2000) A vertebrate globin expressed in the brain. Nature 407, 520-523.
    • (2000) Nature , vol.407 , pp. 520-523
    • Burmester, T.1    Weich, B.2    Reinhardt, S.3    Hankeln, T.4
  • 13
    • 0037449744 scopus 로고    scopus 로고
    • How does the eye breathe? Evidence for neuroglobin-mediated oxygen supply in the mammalian retina
    • Schmidt, M., Giessl, A., Laufs, T., Hankeln, T., Wofrum, U., and Burmester, T. (2003) How does the eye breathe? Evidence for neuroglobin-mediated oxygen supply in the mammalian retina. J. Biol. Chem. 278, 1932-1935.
    • (2003) J. Biol. Chem. , vol.278 , pp. 1932-1935
    • Schmidt, M.1    Giessl, A.2    Laufs, T.3    Hankeln, T.4    Wofrum, U.5    Burmester, T.6
  • 14
    • 3042727978 scopus 로고    scopus 로고
    • Neuroglobin: A respiratory protein of the nervous system
    • Burmester, T., and Hankeln, T. (2004) Neuroglobin: A respiratory protein of the nervous system. News Physiol. Sci. 19, 110-113.
    • (2004) News Physiol. Sci. , vol.19 , pp. 110-113
    • Burmester, T.1    Hankeln, T.2
  • 16
    • 0035909992 scopus 로고    scopus 로고
    • Neuroglobin is up-regulated by and protects neurons from hypoxicischemic injury
    • Sun, Y., Jin, K., Mao, X. O., Zhu, I., and Greenberg, D. A. (2001) Neuroglobin is up-regulated by and protects neurons from hypoxicischemic injury. Proc. Natl Acad. Sci. USA 98, 15306-15311.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 15306-15311
    • Sun, Y.1    Jin, K.2    Mao, X.O.3    Zhu, I.4    Greenberg, D.A.5
  • 18
    • 2542447171 scopus 로고    scopus 로고
    • Reactivity studies of the Fe(III) and Fe(II)NO forms of human neuroglobin reveal a potential role against oxidative stress
    • Herold, S., Fago, A., Weber, R. E., Dewilde, S., and Moens, L. (2004) Reactivity studies of the Fe(III) and Fe(II)NO forms of human neuroglobin reveal a potential role against oxidative stress. J. Biol. Chem. 279, 22841-22847.
    • (2004) J. Biol. Chem. , vol.279 , pp. 22841-22847
    • Herold, S.1    Fago, A.2    Weber, R.E.3    Dewilde, S.4    Moens, L.5
  • 19
    • 10344243985 scopus 로고    scopus 로고
    • A globin gene from lower vertebrates of ancient evolutionary origin: Evidence for two distinct globin families in animals
    • Roesner, A., Fuchs, C. Hankeln, T., and Burmester, T. (2005) A globin gene from lower vertebrates of ancient evolutionary origin: Evidence for two distinct globin families in animals. Mol. Biol. Evol. 22, 12-20.
    • (2005) Mol. Biol. Evol. , vol.22 , pp. 12-20
    • Roesner, A.1    Fuchs, C.2    Hankeln, T.3    Burmester, T.4
  • 21
    • 0032509302 scopus 로고    scopus 로고
    • Genome sequence of the nematode C. elegans: A platform for investigating biology
    • C. elegans Sequencing Consortium (1998) Genome sequence of the nematode C. elegans: A platform for investigating biology. Science 282, 2012-2018.
    • (1998) Science , vol.282 , pp. 2012-2018
  • 24
    • 0028225587 scopus 로고
    • Production of age-synchronous mass cultures of Caenorhabditis elegans
    • Fabian, T. J., and Johnson, T. E. (1994) Production of age-synchronous mass cultures of Caenorhabditis elegans. J. Gerontol. Biol. Sci. 48, B145-B156.
    • (1994) J. Gerontol. Biol. Sci. , vol.48
    • Fabian, T.J.1    Johnson, T.E.2
  • 25
    • 0035798406 scopus 로고    scopus 로고
    • Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure
    • Gough, J., Karplus, K., Hughey, R., and Chothia, C. (2001) Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure. J. Mol. Biol. 313, 903-919.
    • (2001) J. Mol. Biol. , vol.313 , pp. 903-919
    • Gough, J.1    Karplus, K.2    Hughey, R.3    Chothia, C.4
  • 26
    • 0028843842 scopus 로고
    • Alignment of 700 globin sequences: Extent of amino acid substitution and its correlation with variation in volume
    • Kapp, O. H., Moens, L., Vanfleteren, J., Trotman, C. N. A., Suzuki, T., and Vinogradov, S. N. (1995) Alignment of 700 globin sequences: Extent of amino acid substitution and its correlation with variation in volume. Protein Sci. 4, 2179-2190.
    • (1995) Protein Sci. , vol.4 , pp. 2179-2190
    • Kapp, O.H.1    Moens, L.2    Vanfleteren, J.3    Trotman, C.N.A.4    Suzuki, T.5    Vinogradov, S.N.6
  • 27
    • 0019332167 scopus 로고
    • How different amino acid sequences determine similar protein structures: The structure and evolutionary dynamics of the globins
    • Lesk, A. M., and Chothia, C. (1980) How different amino acid sequences determine similar protein structures: the structure and evolutionary dynamics of the globins. J. Mol. Biol. 136, 225-270.
    • (1980) J. Mol. Biol. , vol.136 , pp. 225-270
    • Lesk, A.M.1    Chothia, C.2
  • 30
    • 0034213366 scopus 로고    scopus 로고
    • A novel two-over-two α-helical sandwich fold is characteristic of the truncated hemoglobin family
    • Pesce, A., Couture, M., Dewilde, S., Guertin, M., Yamauchi, K., Ascenzi, P., Moens, L., and Bolognesi, M. (2000) A novel two-over-two α-helical sandwich fold is characteristic of the truncated hemoglobin family. EMBO J. 19, 2424-2434.
    • (2000) EMBO J. , vol.19 , pp. 2424-2434
    • Pesce, A.1    Couture, M.2    Dewilde, S.3    Guertin, M.4    Yamauchi, K.5    Ascenzi, P.6    Moens, L.7    Bolognesi, M.8
  • 31
    • 0038624089 scopus 로고    scopus 로고
    • A TyrCD1/TrpG8 hydrogen bond network and a TyrB10TyrCD1 covalent link shape the heme distal site of Mycobacterium tuberculosis hemoglobin O
    • Milani, M., Savard, P. Y., Ouellet, H., Ascenzi, P., Guertin, M., and Bolognesi, M. (2003) A TyrCD1/TrpG8 hydrogen bond network and a TyrB10TyrCD1 covalent link shape the heme distal site of Mycobacterium tuberculosis hemoglobin O. Proc. Natl. Acad. Sci. USA 100, 5766-5771.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 5766-5771
    • Milani, M.1    Savard, P.Y.2    Ouellet, H.3    Ascenzi, P.4    Guertin, M.5    Bolognesi, M.6
  • 32
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: Molecular Evolutionary Genetics Analysis software
    • Kumar S., Tamura, K., Jakobsen, I. B., and Nei, M. (2001) MEGA2: Molecular Evolutionary Genetics Analysis software. Bioinformatics 17, 1244-1245.
    • (2001) Bioinformatics , vol.17 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.B.3    Nei, M.4
  • 35
    • 17444450739 scopus 로고    scopus 로고
    • The astacin protein family in Caenorhabditis elegans
    • Möhrlen, F., Hutter, H., and Zwilling, R. (2003) The astacin protein family in Caenorhabditis elegans. Eur. J. Biochem. 270, 4909-4920.
    • (2003) Eur. J. Biochem. , vol.270 , pp. 4909-4920
    • Möhrlen, F.1    Hutter, H.2    Zwilling, R.3
  • 36
    • 0028849827 scopus 로고
    • Developmental expression pattern screen for genes in the C. elegans genome sequencing project
    • Lynch, A. S., Briggs, D. A., and Hope, I. A. (1995) Developmental expression pattern screen for genes in the C. elegans genome sequencing project. Nat. Genet. 11, 309-313.
    • (1995) Nat. Genet. , vol.11 , pp. 309-313
    • Lynch, A.S.1    Briggs, D.A.2    Hope, I.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.