Molecular Identification and Differentiation of Staphylococcus Species and Strains of Cheese Origin

Systematic and Applied Microbiology

Volumn 27, Issue 2, 2004, Pages 211-218

  Hoppe Seyler, T S ^a   Jaeger, B ^a   Bockelmann, W ^a   Noordman, W H ^b   Geis, A ^a   Heller, Knut J ^a  

^a FEDERAL RESEARCH INSTITUTE OF NUTRITION AND FOOD   (Germany)

^b NIZO FOOD RESEARCH   (Netherlands)

Author keywords

Amplified ribosomal DNA restriction analysis (ARDRA); Cheese surface; Pulsed field gel electrophoresis (PFGE); Staphylococcus

Indexed keywords

SPACER DNA;

AMPLIFIED RIBOSOMAL DNA RESTRICTION ANALYSIS; ARTICLE; BACTERIAL GENE; CHEESE; CHEMICAL ANALYSIS; DNA SEQUENCE; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PULSED FIELD GEL ELECTROPHORESIS; RESTRICTION MAPPING; SACI GENE; SMAI GENE; SPECIES DIFFERENTIATION; SPECIES IDENTIFICATION; STAPHYLOCOCCUS; STAPHYLOCOCCUS EQUORUM; STRAIN DIFFERENCE; TECHNIQUE;

BACTERIA (MICROORGANISMS); POSIBACTERIA; PROKARYOTA; STAPHYLOCOCCUS; STAPHYLOCOCCUS EQUORUM;

EID: 1542318406     PISSN: 07232020     EISSN: None     Source Type: Journal    
DOI: 10.1078/072320204322881835     Document Type: Article

References (28)

1. Bockelmann, W.: Development of defined surface starter cultures for the ripening of smear cheeses. Int. Dairy J. 12, 123-131 (2002).
2. Bockelmann, W., Willems, P., Jaeger, B., Hoppe-Seyler, T., Engel, G., Heller, K. J.: Reifung von Harzer Käse. Kieler Milchw. Forsch. 54, 317-335 (2002).
3. Bockelmann, W. Hoppe-Seyler, T.: The surface flora of bacterial smear-ripened cheeses from cow's and goat's milk. Int Dairy J.0, 1-8 (2001).
4. Bockelmann, W., Hoppe-Seyler, T., Krusch, U., Hoffmann, W., Heller, K. J.: The microflora of Tilsit cheese; Part 2. Development of a surface smear starter culture. Nahrung. 41, 213-218 (1997).
5. Bockelmann, W., Krusch, U., Engel, G., Smit, G., Klijn, N., Heller, K. J.: The microflora of Tilsit cheese; Part I. Variability of the smear flora. Nahrung. 41, 208-212 (1997).
6. Brim, H., Heyndrickx, M., De Vos, P., Wilmotte, A., Springael, D., Schlegel, H. G., Mergeay, M.: Amplified rDNA restriction analysis and further genotypic characterisation of metal-resistant soil bacteria and related facultative hydrogenotrophs. Syst. Appl. Microbiol. 22, 258-268 (1999).
7. Burri, S.: Microbiology and biochemistry of Gram-positive microflora of the surface of typical swiss cheeses. Ph.D. thesis. Swiss Federal Institute of Technology, Zurich.
8. García-Arata, M. I., Gerner-Smidt, P., Baquero, F., Ibrahim, A.: PCR-amplified 16S and 23S rDNA restriction analysis for the identification of Acinetobacter strains at the DNA group level. Res. Microbiol. 148, 777-784 (1997).
9. George, C. G. Kloos, W. E.: Comparison of the SmaI-digested chromosomes of Staphylococcus epidermidis and the closely related species Staphylococcus capitis and Staphylococcus caprae. Int. J. Syst. Bacteriol. 44, 404-409 (1994).
10. Grimont, P. A. D. Grimont, F.: The Genus Serratia. Ann. Rev. Microbiol. 32, 221-248 (1978).
11. Hoppe-Seyler, T., Jaeger, B., Bockelmann, W., Heller, K. J.: Quantification and identification of microorganisms from the surface of smear cheeses. Kieler Milchw. Forsch. 52, 294-305 (2000).
12. Hoppe-Seyler, T., Jaeger, B., Bockelmann, W., Noordman, W. H., Geis, A., Heller, K. J.: Identification and differentiation of species and strains of Arthrobacter and Microbacterium barkeri isolated from smear cheeses with amplified ribosmal DNA restriction analysis (ARDRA) and pulsed field gel electrophoresis (PFGE). Syst. Appl. Microbiol. in press.
13. Hoppe-Seyler, T. S.: Tilsit cheese: development of a defined surface starter culture. Ph.D. thesis. Christian-Albrechts-Universität, Kiel (1998), (in German).
14. Ingianni, A., Petruzzelli, S., Morandotti, G., Pompei, R.: Genotypic differentiation of Gardnerella vaginalis by amplified ribosomal DNA restriction analysis (ARDRA). FEMS Immunol. Med. Microbiol. 18, 61-66 (1997).
15. Irlinger, F., Morvan, A., Elsolh, N., Bergere, J. L.: Taxonomic characterization of coagulase-negative staphylococci in ripening flora from traditional French cheeses. Syst. Appl. Microbiol. 20, 319-328 (1997).
16. Jaeger, B., Hoppe-Seyler, T. S., Bockelmann, W., Heller, K. J.: The influence of the brine microflora on the ripening of smear cheeses. Milchwissenschaft 57, 645-650 (2002).
17. Lambert, L. H., Cox, T., Mitchell, K., Rossello-Mora, R. A., Del Cueto, C., Dodge, D. E., Orkand, P., Cano, R. J.: Staphylococcus succinus sp. nov., isolated from Dominican amber. Int. J. Syst. Bacteriol. 48 Pt 2, 511-518 (1998).
18. Lee, I.-M., Bartoszyk, I. M., Gundersen-Rindal, D. E., Davis, R. E.: Phylogeny and classification of bacteria in the genera Clavibacter and Ratbayibacter on the basis of 16S rRNA gene sequence analyses. Appl. Environ. Microbiol. 63, 2631-2636 (1997).
19. Leenhouts, K. J., Kok, J., Venema, G.: Stability of integrated plasmids in the chromosome of Lactococcus lactis. Appl. Eniviron. Microbiol. 56, 2726-2735 (1990).
20. Lick, S.: Review: Typing systems for lactobacilli. Milchwissenschaft 58, 256-260 (2003)
21. Matar, G. M., Koehler, J. E., Malcolm, G., Lambert-Fair, M. A., Tappero, J., Hunter, S. B., Swaminathan, B.: Identification of Bartonella species directly in clinical specimens by PCR-restriction fragment length polymorphism analysis of a 16S rRNA gene fragment. J. Clin. Microbiol. 37, 4045-4047 (1999).
22. Olive, D. M., Bean, P.: Principles and applications of methods for DNA-based typing of microbial organisms. J. Clin. Microbiol. 37, 1661-1669 (1999).
23. Place, R. B., Hiestand, D., Burri, S., Teuber, M.: Staphylococcus succinus subsp. casei subsp. nov., a dominant isolate from surface ripened cheese Syst. Appl. Microbiol. 25, 353-359 (2002).
24. Schwartz, D. C. Cantor, C. R.: Separation of yeast chromosome sized DNAs by pulsed field gradient gel electrophoresis. Cell. 37, 67-75 (1984).
25. Thompson J. D., Higgins D. G., Gibson T. J.: CLUSTAL W: improving the sensitivity of progressivemultiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680 (1994).
26. Turbett, G. R. Sellner, L. N.: Digestion of PCR and RT-PCR products with restriction endonucleases without prior purification or precipitation. Promega Notes Magazine. 60, 23 (1996).
27. Vaneechoutte, M., Dijkshoorn, L., Tjernberg, I., Elaichouni, A., De Vos, P., Claeys, G., Verschraegen, G.: Identification of Acinetobacter genomic species by amplified ribosomal DNA restriction analysis. J. Clin. Microbiol. 33, 11-15 (1995).
28. Vaneechoutte, M., Rossau, R., De Vos, P., Gillis, M., Janssens, D., Paepe, N., De Rouck, A., Fiers, T., Claeys, G., Kersters, K.: Rapid identification of bacteria of the Comamonadaceae with amplified ribosomal DNA-restriction analysis (ARDRA). FEMS Microbiol. Lett. 93, 227-234 (1992).