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Volumn 187, Issue 6, 2005, Pages 2138-2147

Evidence for diversifying selection at the pyoverdine locus of Pseudomonas aeruginosa

Author keywords

[No Author keywords available]

Indexed keywords

MEMBRANE PROTEIN; MEMBRANE PROTEIN PA2403; MEMBRANE RECEPTOR; MEMBRANE RECEPTOR FPVA; PEPTIDE SYNTHASE; PYOVERDINE; UNCLASSIFIED DRUG;

EID: 14644394879     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.187.6.2138-2147.2005     Document Type: Article
Times cited : (133)

References (73)
  • 1
    • 0037781843 scopus 로고    scopus 로고
    • Substrate specificity of the nonribosomal peptide synthetase PvdD from Pseudomonas aeruginosa
    • Ackerley, D. F., T. T. Caradoc-Davies, and I. L. Lamont. 2003. Substrate specificity of the nonribosomal peptide synthetase PvdD from Pseudomonas aeruginosa. J. Bacteriol. 185:2848-2855.
    • (2003) J. Bacteriol. , vol.185 , pp. 2848-2855
    • Ackerley, D.F.1    Caradoc-Davies, T.T.2    Lamont, I.L.3
  • 2
    • 3342921823 scopus 로고    scopus 로고
    • Characterization and genetic manipulation of peptide synthetases in Pseudomonas aeruginosa PAO1 in order to generate novel pyoverdines
    • Ackerley, D. F., and I. L. Lamont. 2004. Characterization and genetic manipulation of peptide synthetases in Pseudomonas aeruginosa PAO1 in order to generate novel pyoverdines. Chem. Biol. 11:971-980.
    • (2004) Chem. Biol. , vol.11 , pp. 971-980
    • Ackerley, D.F.1    Lamont, I.L.2
  • 4
    • 0042208362 scopus 로고    scopus 로고
    • Effect of recombination on the accuracy of the likelihood method for detecting positive selection at amino acid sites
    • Anisimova, M., R. Nielsen, and Z. Yang. 2003. Effect of recombination on the accuracy of the likelihood method for detecting positive selection at amino acid sites. Genetics 164:1229-1236.
    • (2003) Genetics , vol.164 , pp. 1229-1236
    • Anisimova, M.1    Nielsen, R.2    Yang, Z.3
  • 5
    • 1642300392 scopus 로고    scopus 로고
    • Sequence polymorphism in the glycosylation island and flagellins of Pseudomonas aeruginosa
    • Arora, S. K., M. C. Wolfgang, S. Lory, and R. Ramphal. 2004. Sequence polymorphism in the glycosylation island And flagellins of Pseudomonas aeruginosa. J. Bacteriol. 186:2115-2122.
    • (2004) J. Bacteriol. , vol.186 , pp. 2115-2122
    • Arora, S.K.1    Wolfgang, M.C.2    Lory, S.3    Ramphal, R.4
  • 7
    • 0033020220 scopus 로고    scopus 로고
    • Uptake of pyocin S3 occurs through the outer membrane ferripyoverdine type II receptor of Pseudomonas aeruginosa
    • Baysse, C., J. M. Meyer, P. Plesiat, V. Geoffroy, Y. Michel-Briand, and P. Cornelis. 1999. Uptake of pyocin S3 occurs through the outer membrane ferripyoverdine type II receptor of Pseudomonas aeruginosa. J. Bacteriol. 181:3849-3851.
    • (1999) J. Bacteriol. , vol.181 , pp. 3849-3851
    • Baysse, C.1    Meyer, J.M.2    Plesiat, P.3    Geoffroy, V.4    Michel-Briand, Y.5    Cornelis, P.6
  • 9
    • 0000803119 scopus 로고
    • A disease of grasshoppers caused by the bacterium Pseudomonas aeruginosa (Schroeter) Migula
    • Bucher, G. E., and J. M. Stephens. 1957. A disease of grasshoppers caused by the bacterium Pseudomonas aeruginosa (Schroeter) Migula. Can. J. Microbiol. 3:611-625.
    • (1957) Can. J. Microbiol. , vol.3 , pp. 611-625
    • Bucher, G.E.1    Stephens, J.M.2
  • 10
    • 0027154740 scopus 로고
    • Secondary metabolites from fluorescent pseudomonads
    • Budzikiewicz, H. 1993. Secondary metabolites from fluorescent pseudomonads. FEMS Microbiol. Rev. 10:209-228.
    • (1993) FEMS Microbiol. Rev. , vol.10 , pp. 209-228
    • Budzikiewicz, H.1
  • 13
    • 0034013269 scopus 로고    scopus 로고
    • Predictive, structure-based model of amino acid recognition by nonribosomal peptide synthetase adenylation domains
    • Challis, G. L., J. Ravel, and C. A. Townsend. 2000. Predictive, structure-based model of amino acid recognition by nonribosomal peptide synthetase adenylation domains. Chem. Biol. 7:211-224.
    • (2000) Chem. Biol. , vol.7 , pp. 211-224
    • Challis, G.L.1    Ravel, J.2    Townsend, C.A.3
  • 14
    • 0024457839 scopus 로고
    • Evidence for different pyoverdine-mediated iron uptake systems among Pseudomonas aeruginosa strains
    • Cornelis, P., D. Hohnadel, and J. M. Meyer. 1989. Evidence for different pyoverdine-mediated iron uptake systems among Pseudomonas aeruginosa strains. Infect. Immun. 57:3491-3497.
    • (1989) Infect. Immun. , vol.57 , pp. 3491-3497
    • Cornelis, P.1    Hohnadel, D.2    Meyer, J.M.3
  • 15
    • 0036942204 scopus 로고    scopus 로고
    • Diversity of siderophore-mediated iron uptake systems in fluorescent pseudomonads: Not only pyoverdines
    • Cornelis, P., and S. Matthijs. 2002. Diversity of siderophore-mediated iron uptake systems in fluorescent pseudomonads: not only pyoverdines. Environ. Microbiol.. 4:787-798.
    • (2002) Environ. Microbiol. , vol.4 , pp. 787-798
    • Cornelis, P.1    Matthijs, S.2
  • 16
    • 0033592926 scopus 로고    scopus 로고
    • Lethal paralysis of Caenorhabditis elegans by Pseudomonas aeruginosa
    • Darby, C., C. L. Cosma, J. H. Thomas, and C. Manoil. 1999. Lethal paralysis of Caenorhabditis elegans by Pseudomonas aeruginosa. Proc. Natl. Acad. Sci. USA 96:15202-15207.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 15202-15207
    • Darby, C.1    Cosma, C.L.2    Thomas, J.H.3    Manoil, C.4
  • 18
    • 0003437299 scopus 로고
    • distributed by the author. Department of Genome Sciences, University of Washington, Seattle, Wash.
    • Felsenstein, J. 1993. PHYLIP (phylogeny inference package) version 3.5c, distributed by the author. Department of Genome Sciences, University of Washington, Seattle, Wash..
    • (1993) PHYLIP (Phylogeny Inference Package) Version 3.5c
    • Felsenstein, J.1
  • 20
    • 0032545324 scopus 로고    scopus 로고
    • Siderophore-mediated iron transport: Crystal structure of FhuA with bound lipopolysaccharide
    • Ferguson, A. D., E. Hofmann, J. W. Coulton, K. Diederichs, and W. Welte. 1998. Siderophore-mediated iron transport: crystal structure of FhuA with bound lipopolysaccharide. Science 282:2215-2220.
    • (1998) Science , vol.282 , pp. 2215-2220
    • Ferguson, A.D.1    Hofmann, E.2    Coulton, J.W.3    Diederichs, K.4    Welte, W.5
  • 22
    • 0035054380 scopus 로고    scopus 로고
    • Automated finishing with autofinish
    • Gordon, D., C. Desmarais, and P. Green. 2001. Automated finishing with autofinish. Genome Res. 11:614-625.
    • (2001) Genome Res. , vol.11 , pp. 614-625
    • Gordon, D.1    Desmarais, C.2    Green, P.3
  • 23
    • 4344605134 scopus 로고    scopus 로고
    • Cooperation and competition in pathogenic bacteria
    • Griffin, A. S., S. A. West, and A. Buckling. 2004. Cooperation and competition in pathogenic bacteria. Nature 430:1024-1027.
    • (2004) Nature , vol.430 , pp. 1024-1027
    • Griffin, A.S.1    West, S.A.2    Buckling, A.3
  • 24
    • 0026038362 scopus 로고
    • Plasmid transformation of Escherichia coli and other bacteria
    • Hanahan, D., J. Jessee, and F. R. Bloom. 1991. Plasmid transformation of Escherichia coli and other bacteria. Methods Enzymol. 204:63-113.
    • (1991) Methods Enzymol. , vol.204 , pp. 63-113
    • Hanahan, D.1    Jessee, J.2    Bloom, F.R.3
  • 26
    • 0023481280 scopus 로고
    • A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli
    • Hoffman, C. S., and F. Winston. 1987. A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli. Gene 57:267-272.
    • (1987) Gene , vol.57 , pp. 267-272
    • Hoffman, C.S.1    Winston, F.2
  • 27
    • 0028028028 scopus 로고
    • Computational DNA sequence analysis
    • Karlin, S., and L. R. Cardon. 1994. Computational DNA sequence analysis. Annu. Rev. Microbiol.. 48:619-654.
    • (1994) Annu. Rev. Microbiol. , vol.48 , pp. 619-654
    • Karlin, S.1    Cardon, L.R.2
  • 28
    • 0034076694 scopus 로고    scopus 로고
    • Sequence diversity of Pseudomonas aeruginosa: Impact on population structure and genome evolution
    • Kiewitz, C., and B. Tummler. 2000. Sequence diversity of Pseudomonas aeruginosa: impact on population structure and genome evolution. J. Bacteriol. 182:3125-3135.
    • (2000) J. Bacteriol. , vol.182 , pp. 3125-3135
    • Kiewitz, C.1    Tummler, B.2
  • 29
    • 0036856331 scopus 로고    scopus 로고
    • TonB of Escherichia coli activates FhuA through interaction with the beta-barrel
    • Killmann, H., C. Herrmann, A. Torun, G. Jung, and V. Braun. 2002. TonB of Escherichia coli activates FhuA through interaction with the beta-barrel. Microbiology 148:3497-3509.
    • (2002) Microbiology , vol.148 , pp. 3497-3509
    • Killmann, H.1    Herrmann, C.2    Torun, A.3    Jung, G.4    Braun, V.5
  • 30
    • 0026594245 scopus 로고
    • Stable propagation of cosmid sized human DNA inserts in an F factor based vector
    • Kim, U. J., H. Shizuya, P. J. de Jong, B. Birren, and M. I. Simon. 1992. Stable propagation of cosmid sized human DNA inserts in an F factor based vector. Nucleic Acids Res. 20:1083-1085.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 1083-1085
    • Kim, U.J.1    Shizuya, H.2    De Jong, P.J.3    Birren, B.4    Simon, M.I.5
  • 31
    • 0347285389 scopus 로고    scopus 로고
    • Sequence analysis of the mobile genome island pKLC102 of Pseudomonas aeruginosa C
    • Klockgether, J., O. Reva, K. Larbig, and B. Tummler. 2004. Sequence analysis of the mobile genome island pKLC102 of Pseudomonas aeruginosa C. J. Bacteriol. 186:518-534.
    • (2004) J. Bacteriol. , vol.186 , pp. 518-534
    • Klockgether, J.1    Reva, O.2    Larbig, K.3    Tummler, B.4
  • 32
    • 0020475449 scopus 로고
    • A simple method for displaying the hydropathic character of a protein
    • Kyte, J., and R. F. Doolittle. 1982. A simple method for displaying the hydropathic character of a protein. J. Mol. Biol. 157:105-132.
    • (1982) J. Mol. Biol. , vol.157 , pp. 105-132
    • Kyte, J.1    Doolittle, R.F.2
  • 34
    • 0035148906 scopus 로고    scopus 로고
    • Identification of a genomic island present in the majority of pathogenic isolates of Pseudomonas aeruginosa
    • Liang, X., X. Q. Pham, M. V. Olson, and S. Lory. 2001. Identification of a genomic island present in the majority of pathogenic isolates of Pseudomonas aeruginosa. J. Bacteriol. 183:843-853.
    • (2001) J. Bacteriol. , vol.183 , pp. 843-853
    • Liang, X.1    Pham, X.Q.2    Olson, M.V.3    Lory, S.4
  • 35
    • 0032519353 scopus 로고    scopus 로고
    • GeneMark.hmm: New solutions for gene finding
    • Lukashin, A. V., and M. Borodovsky. 1998. GeneMark.hmm: new solutions for gene finding. Nucleic Acids Res. 26:1107-1115.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 1107-1115
    • Lukashin, A.V.1    Borodovsky, M.2
  • 37
    • 0033626325 scopus 로고    scopus 로고
    • Pyoverdines: Pigments, siderophores and potential taxonomic markers of fluorescent Pseudomonas species
    • Meyer, J. M. 2000. Pyoverdines: pigments, siderophores and potential taxonomic markers of fluorescent Pseudomonas species. Arch. Microbiol.. 174:135-142.
    • (2000) Arch. Microbiol. , vol.174 , pp. 135-142
    • Meyer, J.M.1
  • 38
    • 0037082104 scopus 로고    scopus 로고
    • Siderophore-mediated iron uptake in fluorescent Pseudomonas: Characterization of the pyoverdine-receptor binding site of three cross-reacting pyoverdines
    • Meyer, J. M., V. A. Geoffroy, C. Baysse, P. Cornelis, I. Barelmann, K. Taraz, and H. Budzikiewicz. 2002. Siderophore-mediated iron uptake in fluorescent Pseudomonas: characterization of the pyoverdine-receptor binding site of three cross-reacting pyoverdines. Arch. Biochem. Biophys. 397:179-183.
    • (2002) Arch. Biochem. Biophys. , vol.397 , pp. 179-183
    • Meyer, J.M.1    Geoffroy, V.A.2    Baysse, C.3    Cornelis, P.4    Barelmann, I.5    Taraz, K.6    Budzikiewicz, H.7
  • 39
  • 40
  • 41
    • 0032901355 scopus 로고    scopus 로고
    • The ferripyoverdine receptor FpvA of Pseudomonas aeruginosa PAO1 recognizes the ferripyoverdines of P. aeruginosa PAO1 and P. fluorescens ATCC13525
    • Meyer, J. M., A. Stintzi, and K. Poole. 1999. The ferripyoverdine receptor FpvA of Pseudomonas aeruginosa PAO1 recognizes the ferripyoverdines of P. aeruginosa PAO1 and P. fluorescens ATCC13525. FEMS Microbiol. Lett. 170:145-150.
    • (1999) FEMS Microbiol. Lett. , vol.170 , pp. 145-150
    • Meyer, J.M.1    Stintzi, A.2    Poole, K.3
  • 42
    • 0036905773 scopus 로고    scopus 로고
    • Ways of assembling complex natural products on modular nonribosomal peptide synthetases
    • Mootz, H. D., D. Schwarzer, and M. A. Marahiel. 2002. Ways of assembling complex natural products on modular nonribosomal peptide synthetases. Chembiochem 3:490-504.
    • (2002) Chembiochem , vol.3 , pp. 490-504
    • Mootz, H.D.1    Schwarzer, D.2    Marahiel, M.A.3
  • 44
    • 0035982906 scopus 로고    scopus 로고
    • Gene-Chip expression analysis of the iron starvation response in Pseudomonas aeruginosa: Identification of novel pyoverdine biosynthesis genes
    • Ochsner, U. A., P. J. Wilderman, A. I. Vasil, and M. L. Vasil. 2002. Gene-Chip expression analysis of the iron starvation response in Pseudomonas aeruginosa: identification of novel pyoverdine biosynthesis genes. Mol. Microbiol.. 45:1277-1287.
    • (2002) Mol. Microbiol. , vol.45 , pp. 1277-1287
    • Ochsner, U.A.1    Wilderman, P.J.2    Vasil, A.I.3    Vasil, M.L.4
  • 45
    • 0030873221 scopus 로고    scopus 로고
    • Recombination-mediated PCR-directed plasmid construction in vivo in yeast
    • Oldenburg, K. R., K. T. Vo, S. Michaelis, and C. Paddon. 1997. Recombination-mediated PCR-directed plasmid construction in vivo in yeast. Nucleic Acids Res. 25:451-452.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 451-452
    • Oldenburg, K.R.1    Vo, K.T.2    Michaelis, S.3    Paddon, C.4
  • 46
    • 0033933636 scopus 로고    scopus 로고
    • Cascaded multiple classifiers for secondary structure prediction
    • Ouali, M., and R. D. King. 2000. Cascaded multiple classifiers for secondary structure prediction. Protein Sci. 9:1162-1176.
    • (2000) Protein Sci. , vol.9 , pp. 1162-1176
    • Ouali, M.1    King, R.D.2
  • 48
    • 0034527071 scopus 로고    scopus 로고
    • Pathogenesis of the human opportunistic pathogen Pseudomonas aeruginosa PA14 in Arabidopsis
    • Plotnikova, J. M., L. G. Rahme, and F. M. Ausubel. 2000. Pathogenesis of the human opportunistic pathogen Pseudomonas aeruginosa PA14 in Arabidopsis. Plant Physiol. 124:1766-1774.
    • (2000) Plant Physiol. , vol.124 , pp. 1766-1774
    • Plotnikova, J.M.1    Rahme, L.G.2    Ausubel, F.M.3
  • 49
    • 0346636767 scopus 로고    scopus 로고
    • Iron acquisition and its control in Pseudomonas aeruginosa: Many roads lead to Rome
    • Poole, K., and G. A. McKay. 2003. Iron acquisition and its control in Pseudomonas aeruginosa: many roads lead to Rome. Front. Biosci. 8:d661-d686.
    • (2003) Front. Biosci. , vol.8
    • Poole, K.1    McKay, G.A.2
  • 50
    • 0027203781 scopus 로고
    • Cloning and nucleotide sequence analysis of the ferripyoverdine receptor gene fpvA of Pseudomonas aeruginosa
    • Poole, K., S. Neshat, K. Krebes, and D. E. Heinrichs. 1993. Cloning and nucleotide sequence analysis of the ferripyoverdine receptor gene fpvA of Pseudomonas aeruginosa. J. Bacteriol. 175:4597-4604.
    • (1993) J. Bacteriol. , vol.175 , pp. 4597-4604
    • Poole, K.1    Neshat, S.2    Krebes, K.3    Heinrichs, D.E.4
  • 51
    • 0037315735 scopus 로고    scopus 로고
    • Evolutionary implications of microbial genome tetranucleotide frequency biases
    • Pride, D. T., R. J. Meinersmann, T. M. Wassenaar, and M. J. Blaser. 2003. Evolutionary implications of microbial genome tetranucleotide frequency biases. Genome Res. 13:145-158.
    • (2003) Genome Res. , vol.13 , pp. 145-158
    • Pride, D.T.1    Meinersmann, R.J.2    Wassenaar, T.M.3    Blaser, M.J.4
  • 52
    • 0037022589 scopus 로고    scopus 로고
    • The human pathogen Pseudomonas aeruginosa utilizes conserved virulence pathways to infect the social amoeba Dictyostelium discoideum
    • Pukatzki, S., R. H. Kessin, and J. J. Mekalanos. 2002. The human pathogen Pseudomonas aeruginosa utilizes conserved virulence pathways to infect the social amoeba Dictyostelium discoideum. Proc. Natl. Acad. Sci. USA 99:3159-3164.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 3159-3164
    • Pukatzki, S.1    Kessin, R.H.2    Mekalanos, J.J.3
  • 53
    • 0029035765 scopus 로고
    • Common virulence factors for bacterial pathogenicity in plants and animals
    • Rahme, L. G., E. J. Stevens, S. F. Wolfort, J. Shao, R. G. Tompkins, and F. M. Ausubel. 1995. Common virulence factors for bacterial pathogenicity in plants and animals. Science 268:1899-1902.
    • (1995) Science , vol.268 , pp. 1899-1902
    • Rahme, L.G.1    Stevens, E.J.2    Wolfort, S.F.3    Shao, J.4    Tompkins, R.G.5    Ausubel, F.M.6
  • 54
    • 0033759220 scopus 로고    scopus 로고
    • Iron metabolism in pathogenic bacteria
    • Ratledge, C., and L. G. Dover. 2000. Iron metabolism in pathogenic bacteria. Annu. Rev. Microbiol.. 54:881-941.
    • (2000) Annu. Rev. Microbiol. , vol.54 , pp. 881-941
    • Ratledge, C.1    Dover, L.G.2
  • 55
    • 0038689220 scopus 로고    scopus 로고
    • Genomics of pyoverdine-mediated iron uptake in pseudomonads
    • Ravel, J., and P. Cornelis. 2003. Genomics of pyoverdine-mediated iron uptake in pseudomonads. Trends Microbiol.. 11:195-200.
    • (2003) Trends Microbiol. , vol.11 , pp. 195-200
    • Ravel, J.1    Cornelis, P.2
  • 57
    • 0036144866 scopus 로고    scopus 로고
    • Linker-mediated recombinational subcloning of large DNA fragments using yeast
    • Raymond, C. K., E. H. Sims, and M. V. Olson. 2002. Linker-mediated recombinational subcloning of large DNA fragments using yeast. Genome Res. 12:190-197.
    • (2002) Genome Res. , vol.12 , pp. 190-197
    • Raymond, C.K.1    Sims, E.H.2    Olson, M.V.3
  • 58
    • 0034201441 scopus 로고    scopus 로고
    • EMBOSS: The European Molecular Biology open software suite
    • Rice, P., I. Longden, and A. Bleasby. 2000. EMBOSS: the European Molecular Biology open software suite. Trends Genet. 16:276-277.
    • (2000) Trends Genet. , vol.16 , pp. 276-277
    • Rice, P.1    Longden, I.2    Bleasby, A.3
  • 59
    • 0032526323 scopus 로고    scopus 로고
    • Oligonucleotide bias in Bacillus subtilis: General trends and taxonomic comparisons
    • Rocha, E. P., A. Viari, and A. Danchin. 1998. Oligonucleotide bias in Bacillus subtilis: general trends and taxonomic comparisons. Nucleic Acids Res. 26:2971-2980.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 2971-2980
    • Rocha, E.P.1    Viari, A.2    Danchin, A.3
  • 60
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and for biologist programmers
    • Rozen, S., and H. Skaletsky. 2000. Primer3 on the WWW for general users and for biologist programmers. Methods Mol. Biol. 132:365-386.
    • (2000) Methods Mol. Biol. , vol.132 , pp. 365-386
    • Rozen, S.1    Skaletsky, H.2
  • 62
    • 0023650543 scopus 로고
    • The codon Adaptation Index-a measure of directional synonymous codon usage bias, and its potential applications
    • Sharp, P. M., and W. H. Li. 1987. The codon Adaptation Index-a measure of directional synonymous codon usage bias, and its potential applications. Nucleic Acids Res. 15:1281-1295.
    • (1987) Nucleic Acids Res. , vol.15 , pp. 1281-1295
    • Sharp, P.M.1    Li, W.H.2
  • 63
    • 0025978949 scopus 로고
    • Getting started with yeast
    • Sherman, F. 1991. Getting started with yeast. Methods Enzymol. 194:3-21.
    • (1991) Methods Enzymol. , vol.194 , pp. 3-21
    • Sherman, F.1
  • 66
    • 0034104386 scopus 로고    scopus 로고
    • Impact of siderophore production on Pseudomonas aeruginosa infections in immunosuppressed mice
    • Takase, H., H. Nitanai, K. Hoshino, and T. Otani. 2000. Impact of siderophore production on Pseudomonas aeruginosa infections in immunosuppressed mice. Infect. Immun. 68:1834-1839.
    • (2000) Infect. Immun. , vol.68 , pp. 1834-1839
    • Takase, H.1    Nitanai, H.2    Hoshino, K.3    Otani, T.4
  • 67
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 68
    • 0032704951 scopus 로고    scopus 로고
    • The response of Pseudomonas aeruginosa to iron: Genetics, biochemistry and virulence
    • Vasil, M. L., and U. A. Ochsner. 1999. The response of Pseudomonas aeruginosa to iron: genetics, biochemistry and virulence. Mol. Microbiol.. 34:399-413.
    • (1999) Mol. Microbiol. , vol.34 , pp. 399-413
    • Vasil, M.L.1    Ochsner, U.A.2
  • 69
    • 0036046297 scopus 로고    scopus 로고
    • Iron transport and regulation, cell signalling and genomics: Lessons from Escherichia coli and Pseudomonas
    • Visca, P., L. Leoni, M. J. Wilson, and I. L. Lamont. 2002. Iron transport and regulation, cell signalling and genomics: lessons from Escherichia coli and Pseudomonas. Mol. Microbiol.. 45:1177-1190.
    • (2002) Mol. Microbiol. , vol.45 , pp. 1177-1190
    • Visca, P.1    Leoni, L.2    Wilson, M.J.3    Lamont, I.L.4
  • 70
    • 0037422723 scopus 로고    scopus 로고
    • Cooperation, virulence and siderophore production in bacterial parasites
    • West, S. A., and A. Buckling. 2003. Cooperation, virulence and siderophore production in bacterial parasites. Proc. R. Soc. Lond. B Biol. Sci. 270:37-44.
    • (2003) Proc. R. Soc. Lond. B Biol. Sci. , vol.270 , pp. 37-44
    • West, S.A.1    Buckling, A.2
  • 71
    • 0030924693 scopus 로고    scopus 로고
    • Multiple-complete-digest restriction fragment mapping: Generating sequence-ready maps for large-scale DNA sequencing
    • Wong, G. K., J. Yu, E. C. Thayer, and M. V. Olson. 1997. Multiple-complete-digest restriction fragment mapping: generating sequence-ready maps for large-scale DNA sequencing. Proc. Natl. Acad. Sci. USA 94:5225-5230.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 5225-5230
    • Wong, G.K.1    Yu, J.2    Thayer, E.C.3    Olson, M.V.4
  • 72
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang, Z. 1997. PAML: a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13:555-556.
    • (1997) Comput. Appl. Biosci. , vol.13 , pp. 555-556
    • Yang, Z.1
  • 73
    • 0034097381 scopus 로고    scopus 로고
    • Codon-substitution models for heterogeneous selection pressure at amino acid sites
    • Yang, Z., R. Nielsen, N. Goldman, and A. M. Pedersen. 2000. Codon-substitution models for heterogeneous selection pressure at amino acid sites. Genetics 155:431-449.
    • (2000) Genetics , vol.155 , pp. 431-449
    • Yang, Z.1    Nielsen, R.2    Goldman, N.3    Pedersen, A.M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.