-
1
-
-
0035253197
-
Keeping it in the family: Folding studies of related proteins
-
Gunasekaran, K., Eyles, S. J., Hagler, A. T., and Gierasch, L. M. (2001) Keeping it in the family: folding studies of related proteins. Curr. Opin. Struct. Biol. 11, 83-93.
-
(2001)
Curr. Opin. Struct. Biol.
, vol.11
, pp. 83-93
-
-
Gunasekaran, K.1
Eyles, S.J.2
Hagler, A.T.3
Gierasch, L.M.4
-
2
-
-
0028260307
-
Lipid-binding proteins: A family of fatty acid and retinoid transport proteins
-
Banaszak, L., Winter, N., Xu, Z., Bernlohr, D. A., Cowan, S., and Jones, T. A. (1994) Lipid-binding proteins: A family of fatty acid and retinoid transport proteins. Adv. Protein Chem. 45, 89-151.
-
(1994)
Adv. Protein Chem.
, vol.45
, pp. 89-151
-
-
Banaszak, L.1
Winter, N.2
Xu, Z.3
Bernlohr, D.A.4
Cowan, S.5
Jones, T.A.6
-
3
-
-
0043253165
-
The mammalian fatty acid-binding protein multigene family: Molecular and genetic insights into function
-
Hertzel, A. V., and Bernlohr, D. A. (2000) The mammalian fatty acid-binding protein multigene family: Molecular and genetic insights into function. Trends Endocrinol. Metab. 11, 175-180.
-
(2000)
Trends Endocrinol. Metab.
, vol.11
, pp. 175-180
-
-
Hertzel, A.V.1
Bernlohr, D.A.2
-
4
-
-
0034620582
-
β-sheet proteins with nearly identical structures have different folding intermediates
-
Dalessio, P. M., and Ropson, I. J. (2000) β-sheet proteins with nearly identical structures have different folding intermediates. Biochemistry 39, 860-871.
-
(2000)
Biochemistry
, vol.39
, pp. 860-871
-
-
Dalessio, P.M.1
Ropson, I.J.2
-
5
-
-
0026712235
-
Refinement of the structure of recombinant rat intestinal fatty acid-binding apoprotein at 1.2 Å resolution
-
Scapin, G., Gordon, J. I., and Sacchettini, J. C. (1992) Refinement of the structure of recombinant rat intestinal fatty acid-binding apoprotein at 1.2 Å resolution. J. Biol. Chem. 267, 4253-4269.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 4253-4269
-
-
Scapin, G.1
Gordon, J.I.2
Sacchettini, J.C.3
-
6
-
-
0030586026
-
Flexibility is a likely determinant of binding specificity in the case of ileal lipid binding protein
-
Lucke, C., Zhang, F., Ruterjans, H., Hamilton, J. A., and Sacchettini, J. C. (1996) Flexibility is a likely determinant of binding specificity in the case of ileal lipid binding protein. Structure 4, 785-800.
-
(1996)
Structure
, vol.4
, pp. 785-800
-
-
Lucke, C.1
Zhang, F.2
Ruterjans, H.3
Hamilton, J.A.4
Sacchettini, J.C.5
-
7
-
-
0031036243
-
Discrete backbone disorder in the nuclear magnetic resonance structure of apo intestinal fatty acid-binding protein: Implications for the mechanism of ligand entry
-
Hodsdon, M. E., and Cistola, D. P. (1997) Discrete backbone disorder in the nuclear magnetic resonance structure of apo intestinal fatty acid-binding protein: implications for the mechanism of ligand entry. Biochemistry 36, 1450-1460.
-
(1997)
Biochemistry
, vol.36
, pp. 1450-1460
-
-
Hodsdon, M.E.1
Cistola, D.P.2
-
8
-
-
0032190351
-
Folding mechanism of three structurally similar β-sheet proteins
-
Burns, L. L., Dalessio, P. M., and Ropson, I. J. (1998) Folding mechanism of three structurally similar β-sheet proteins. Proteins 33, 107-118.
-
(1998)
Proteins
, vol.33
, pp. 107-118
-
-
Burns, L.L.1
Dalessio, P.M.2
Ropson, I.J.3
-
9
-
-
0035874143
-
Folding of intracellular retinol and retinoic acid binding proteins
-
Burns, L. L., and Ropson, I. J. (2001) Folding of intracellular retinol and retinoic acid binding proteins. Proteins 43, 292-302.
-
(2001)
Proteins
, vol.43
, pp. 292-302
-
-
Burns, L.L.1
Ropson, I.J.2
-
10
-
-
0025027038
-
Folding of a predominately β-structure protein: Rat intestinal fatty acid binding protein
-
Ropson, I. J., Gordon, J. I., and Frieden, C. (1990) Folding of a predominately β-structure protein: rat intestinal fatty acid binding protein. Biochemistry 29, 9591-9599.
-
(1990)
Biochemistry
, vol.29
, pp. 9591-9599
-
-
Ropson, I.J.1
Gordon, J.I.2
Frieden, C.3
-
11
-
-
0030747673
-
Fluorescence spectral changes during the folding of intestinal fatty acid binding protein
-
Ropson, I. J. and Dalessio, P. M. (1997) Fluorescence spectral changes during the folding of intestinal fatty acid binding protein. Biochemistry 36, 8594-8601.
-
(1997)
Biochemistry
, vol.36
, pp. 8594-8601
-
-
Ropson, I.J.1
Dalessio, P.M.2
-
12
-
-
0029929965
-
Intrinsic tryptophans of CRABP I as probes of structure and folding
-
Clark, P. L., Weston, B. F., and Gierasch, L. M. (1996) Intrinsic tryptophans of CRABP I as probes of structure and folding. Protein Sci. 5, 1108-1117.
-
(1996)
Protein Sci.
, vol.5
, pp. 1108-1117
-
-
Clark, P.L.1
Weston, B.F.2
Gierasch, L.M.3
-
13
-
-
0025150465
-
Expression of rat intestinal fatty acid binding protein in E. coli and its subsequent structural analysis: A model for studying the molecular details of fatty acid-protein interaction
-
Sacchettini, J. C., Banaszak, L. J., and Gordon, J. I. (1990) Expression of rat intestinal fatty acid binding protein in E. coli and its subsequent structural analysis: A model for studying the molecular details of fatty acid-protein interaction. Mol. Cell. Biochem. 98, 81-93.
-
(1990)
Mol. Cell. Biochem.
, vol.98
, pp. 81-93
-
-
Sacchettini, J.C.1
Banaszak, L.J.2
Gordon, J.I.3
-
14
-
-
0037133162
-
Energetics by NMR: Site specific binding in a positively cooperative system
-
Tochtrop, G. P., Richter, K., Tang, C., Toner, J. J., Covey, D. F., and Cistola, D. P. (2002) Energetics by NMR: Site specific binding in a positively cooperative system. Proc. Natl. Acad. Sci. U.S.A. 99, 184-1852.
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 184-1852
-
-
Tochtrop, G.P.1
Richter, K.2
Tang, C.3
Toner, J.J.4
Covey, D.F.5
Cistola, D.P.6
-
15
-
-
0028583118
-
Recombinant proteins can be isolated from E. coli cells by repeated cycles of freezing and thawing
-
Johnson, B. H., and Hecht, M. H. (1994) Recombinant proteins can be isolated from E. coli cells by repeated cycles of freezing and thawing. Biotechnology 12, 1357-1360.
-
(1994)
Biotechnology
, vol.12
, pp. 1357-1360
-
-
Johnson, B.H.1
Hecht, M.H.2
-
16
-
-
0032469297
-
Turn scanning by site-directed mutagenesis: Application to the protein folding problem using the intestinal fatty acid binding protein
-
Kim, K., and Frieden, C. (1998) Turn scanning by site-directed mutagenesis: Application to the protein folding problem using the intestinal fatty acid binding protein. Protein Sci. 7, 1821-1828.
-
(1998)
Protein Sci.
, vol.7
, pp. 1821-1828
-
-
Kim, K.1
Frieden, C.2
-
17
-
-
0028871804
-
How to measure and predict the molar absorption coefficient of a protein
-
Pace, C. N., Vajdos, F., Fee, L., Grimsley, G., and Gray, T. (1995) How to measure and predict the molar absorption coefficient of a protein. Protein Sci. 4, 2411-2423.
-
(1995)
Protein Sci.
, vol.4
, pp. 2411-2423
-
-
Pace, C.N.1
Vajdos, F.2
Fee, L.3
Grimsley, G.4
Gray, T.5
-
18
-
-
0022555885
-
Determination and analysis of urea and guanidine hydrochloride denaturation curves
-
Pace, C. N. (1986) Determination and analysis of urea and guanidine hydrochloride denaturation curves. Methods Enzymol. 131, 266-280.
-
(1986)
Methods Enzymol.
, vol.131
, pp. 266-280
-
-
Pace, C.N.1
-
19
-
-
0032813944
-
The progressive development of structure and stability during the equilibrium unfolding of the α-subunit of tryptophan synthase from Escherichia coli
-
Gualfetti, P. J., Bilsel, O, and Matthews, C. R. (1999) The progressive development of structure and stability during the equilibrium unfolding of the α-subunit of tryptophan synthase from Escherichia coli. Protein Sci. 8, 1623-1635.
-
(1999)
Protein Sci.
, vol.8
, pp. 1623-1635
-
-
Gualfetti, P.J.1
Bilsel, O.2
Matthews, C.R.3
-
20
-
-
0023697408
-
Unfolding free energy changes determined by the linear extrapolation method: Unfolding of phenylmethanesulfonyl α-chymotrypsin using different denaturants
-
Santoro, M. M., and Bolen, D. W. (1988) Unfolding free energy changes determined by the linear extrapolation method: Unfolding of phenylmethanesulfonyl α-chymotrypsin using different denaturants. Biochemistry 27, 8063-8068.
-
(1988)
Biochemistry
, vol.27
, pp. 8063-8068
-
-
Santoro, M.M.1
Bolen, D.W.2
-
21
-
-
0020440235
-
Regression analysis, experimental error, and statistical criteria in the design and analysis of experiments for discrimination between rival kinetic models
-
Mannervik, B. (1982) Regression analysis, experimental error, and statistical criteria in the design and analysis of experiments for discrimination between rival kinetic models. Methods Enzymol. 87, 370-390.
-
(1982)
Methods Enzymol.
, vol.87
, pp. 370-390
-
-
Mannervik, B.1
-
22
-
-
0023442604
-
Fitting curves to data using nonlinear regression: A practical and nonmathematical review
-
Motulsky, H. J., and Ransnas, L. A. (1987) Fitting curves to data using nonlinear regression: A practical and nonmathematical review. FASEB J. 1, 365-374.
-
(1987)
FASEB J.
, vol.1
, pp. 365-374
-
-
Motulsky, H.J.1
Ransnas, L.A.2
-
23
-
-
0031473847
-
SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling
-
Guex, N. and Peitsch, M. C. (1997) SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling. Electrophoresis 18, 2714-2723.
-
(1997)
Electrophoresis
, vol.18
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
24
-
-
0037297401
-
Insights into the bile acid transportation system: The human ileal lipid-binding protein-cholyltaurine complex and its comparison with homologous structures
-
Kurz, M., Brachvogel, V., Matter, H., Stengelin, S., Thuring, H., and Kramer, W. (2003) Insights into the bile acid transportation system: The human ileal lipid-binding protein-cholyltaurine complex and its comparison with homologous structures. Proteins 50, 312-328.
-
(2003)
Proteins
, vol.50
, pp. 312-328
-
-
Kurz, M.1
Brachvogel, V.2
Matter, H.3
Stengelin, S.4
Thuring, H.5
Kramer, W.6
-
25
-
-
84913591509
-
Improved Strategy in Analytic Surface Calculation for Molecular Systems: Handling of Singularities and Computational Efficiency
-
Eisenhaber, F., and Argos, P. (1993) Improved Strategy in Analytic Surface Calculation for Molecular Systems: Handling of Singularities and Computational Efficiency. J. Comput. Chem. 14, 1272-1280.
-
(1993)
J. Comput. Chem.
, vol.14
, pp. 1272-1280
-
-
Eisenhaber, F.1
Argos, P.2
-
26
-
-
0026695975
-
Dynamic NMR spectral analysis and protein folding: Identification of a highly populated folding intermediate of rat intestinal fatty acid binding protein
-
Ropson, I. J. and Frieden, C. (1992) Dynamic NMR spectral analysis and protein folding: Identification of a highly populated folding intermediate of rat intestinal fatty acid binding protein. Proc. Natl. Acad. Sci. U.S.A. 89, 7222-7226.
-
(1992)
Proc. Natl. Acad. Sci. U.S.A.
, vol.89
, pp. 7222-7226
-
-
Ropson, I.J.1
Frieden, C.2
-
27
-
-
14344254672
-
The role of Trp-82 in the folding of intestinal fatty acid binding protein
-
in press
-
Dalessio, P. M., Fromholt, S. E., and Ropson, I. J. The role of Trp-82 in the folding of intestinal fatty acid binding protein. Proteins, in press.
-
Proteins
-
-
Dalessio, P.M.1
Fromholt, S.E.2
Ropson, I.J.3
-
28
-
-
0028820703
-
Denaturant m values and heat capacity changes: Relation to changes in accessible surface areas of protein unfolding
-
Myers, J. K., Pace, C. N., and Scholtz, J. M. (1995) Denaturant m values and heat capacity changes: Relation to changes in accessible surface areas of protein unfolding. Protein Sci. 4, 2138-2148.
-
(1995)
Protein Sci.
, vol.4
, pp. 2138-2148
-
-
Myers, J.K.1
Pace, C.N.2
Scholtz, J.M.3
-
29
-
-
0034581327
-
Role of the molten globule state in protein folding
-
Arai, M., and Kuwajima, K. (2000) Role of the molten globule state in protein folding. Adv. Protein Chem. 53, 209-282.
-
(2000)
Adv. Protein Chem.
, vol.53
, pp. 209-282
-
-
Arai, M.1
Kuwajima, K.2
-
30
-
-
0037177227
-
The intestinal fatty acid binding protein: The role of turns in fast and slow folding processes
-
Chattopadhyay, K., Zhong, S., Yeh, S.-R., Rousseau, D. L., and Frieden, C. (2002) The intestinal fatty acid binding protein: the role of turns in fast and slow folding processes. Biochemistry 41, 4040-4047.
-
(2002)
Biochemistry
, vol.41
, pp. 4040-4047
-
-
Chattopadhyay, K.1
Zhong, S.2
Yeh, S.-R.3
Rousseau, D.L.4
Frieden, C.5
-
31
-
-
0035836515
-
Hierarchical folding of intestinal fatty acid binding protein
-
Yeh, S.-R., Ropson, I. J. and Rousseau, D. L. (2001) Hierarchical folding of intestinal fatty acid binding protein. Biochemistry 40, 4205-4210.
-
(2001)
Biochemistry
, vol.40
, pp. 4205-4210
-
-
Yeh, S.-R.1
Ropson, I.J.2
Rousseau, D.L.3
-
32
-
-
0032533248
-
pH dependence of the folding of fatty acid binding protein
-
Dalessio, P. M., and Ropson, I. J. (1998) pH dependence of the folding of fatty acid binding protein. Arch. Biochem. Biophys. 359, 199-208.
-
(1998)
Arch. Biochem. Biophys.
, vol.359
, pp. 199-208
-
-
Dalessio, P.M.1
Ropson, I.J.2
-
33
-
-
0037414650
-
Weak cooperativity in the core causes a switch in folding mechanism between two proteins of the cks family
-
Seeliger, M. A., Breward, S. E., and Itzhaki, L. S. (2003) Weak cooperativity in the core causes a switch in folding mechanism between two proteins of the cks family. J. Mol. Biol. 325, 189-199.
-
(2003)
J. Mol. Biol.
, vol.325
, pp. 189-199
-
-
Seeliger, M.A.1
Breward, S.E.2
Itzhaki, L.S.3
-
34
-
-
0033548553
-
Rapid folding with and without populated intermediates in the homologous four-helix proteins Im7 and Im9
-
Ferguson, N., Capaldi, A. P., James, R., Kleanthous, C., and Radford, S. E. (1999) Rapid folding with and without populated intermediates in the homologous four-helix proteins Im7 and Im9. J. Mol. Biol. 286, 1597-1608.
-
(1999)
J. Mol. Biol.
, vol.286
, pp. 1597-1608
-
-
Ferguson, N.1
Capaldi, A.P.2
James, R.3
Kleanthous, C.4
Radford, S.E.5
-
35
-
-
0037423705
-
Structural analysis of the rate-limiting transition states in the folding of Im7 and Im9: Similarities and differences in the folding of homologous proteins
-
Friel, C. T., Capaldi, A. P., and Radford, S. E. (2003) Structural analysis of the rate-limiting transition states in the folding of Im7 and Im9: Similarities and differences in the folding of homologous proteins. J. Mol. Biol. 326, 293-305.
-
(2003)
J. Mol. Biol.
, vol.326
, pp. 293-305
-
-
Friel, C.T.1
Capaldi, A.P.2
Radford, S.E.3
-
36
-
-
0033871567
-
Critical role of β-hairpin formation in protein G folding
-
McCallister, E. L., Alm, E., and Baker, D. (2000) Critical role of β-hairpin formation in protein G folding. Nat. Struct. Biol. 7, 669-673.
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 669-673
-
-
McCallister, E.L.1
Alm, E.2
Baker, D.3
-
37
-
-
0034685619
-
A breakdown of symmetry in the folding transition state of protein L.
-
Kim, D. E., Fisher, C., and Baker, D. (2000) A breakdown of symmetry in the folding transition state of protein L. J. Mol. Biol. 298, 971-984.
-
(2000)
J. Mol. Biol.
, vol.298
, pp. 971-984
-
-
Kim, D.E.1
Fisher, C.2
Baker, D.3
-
38
-
-
0034964196
-
Computer-based redesign of a protein folding pathway
-
Nauli, S., Kuhlman, B., and Baker, D. (2001) Computer-based redesign of a protein folding pathway. Nat. Struct. Biol. 8, 602-605.
-
(2001)
Nat. Struct. Biol.
, vol.8
, pp. 602-605
-
-
Nauli, S.1
Kuhlman, B.2
Baker, D.3
-
39
-
-
0035936551
-
Intestinal fatty acid binding protein: The folding mechanism as determined by NMR studies
-
Hodsdon, M. E., and Frieden, C. 2001. Intestinal fatty acid binding protein: The folding mechanism as determined by NMR studies. Biochemistry 40, 732-742.
-
(2001)
Biochemistry
, vol.40
, pp. 732-742
-
-
Hodsdon, M.E.1
Frieden, C.2
-
40
-
-
0030844583
-
Ultrafast signals in protein folding and the polypeptide contracted state
-
Sosnick, T. R., Shtilerman, M. D., Mayne, L., and Englander, W. S. (1997) Ultrafast signals in protein folding and the polypeptide contracted state. Proc. Natl. Acad. Sci. U.S.A. 94, 8545-8550.
-
(1997)
Proc. Natl. Acad. Sci. U.S.A.
, vol.94
, pp. 8545-8550
-
-
Sosnick, T.R.1
Shtilerman, M.D.2
Mayne, L.3
Englander, W.S.4
-
41
-
-
0038581260
-
Hidden intermediates and Levinthal paradox in the folding of small proteins
-
Bai, Y. (2003) Hidden intermediates and Levinthal paradox in the folding of small proteins. Biochem. Biophys. Res. Comm. 305, 785-788.
-
(2003)
Biochem. Biophys. Res. Comm.
, vol.305
, pp. 785-788
-
-
Bai, Y.1
-
42
-
-
0037225280
-
Evidence for sequential barriers and obligatory intermediates in apparent two-state protein folding
-
Sanchez, I. E., and Kiefhaber, T. (2003) Evidence for sequential barriers and obligatory intermediates in apparent two-state protein folding. J. Mol. Biol. 325, 367-376.
-
(2003)
J. Mol. Biol.
, vol.325
, pp. 367-376
-
-
Sanchez, I.E.1
Kiefhaber, T.2
|