Complete genome sequencing of Anaplasma marginale reveals that the surface is skewed to two superfamilies of outer membrane proteins

Proceedings of the National Academy of Sciences of the United States of America

Volumn 102, Issue 3, 2005, Pages 844-849

  Brayton, Kelly A ^a   Kappmeyer, Lowell S ^b   Herndon, David R ^b   Dark, Michael J ^b   Tibbals, David L ^a   Palmer, Guy H ^a   McGuire, Travis C ^a   Knowles Jr , Donald P ^a,b  

^a WASHINGTON STATE UNIVERSITY   (United States)

^b Animal Disease Research Unit   (United States)

Author keywords

Bacterial artificial chromosome; Rickettsiales; St. Maries strain

Indexed keywords

BACTERIAL ANTIGEN; BACTERIAL PROTEIN; EPITOPE; OUTER MEMBRANE PROTEIN; PROTEIN MSP1; PROTEIN MSP2; UNCLASSIFIED DRUG;

ANAPLASMA MARGINALE; ARTICLE; BACTERIAL GENOME; BACTERIAL STRAIN; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN FAMILY; PSEUDOGENE; SEQUENCE ANALYSIS; TICK BORNE DISEASE;

ANAPLASMA MARGINALE; ANTIGENIC VARIATION; ANTIGENS, BACTERIAL; BACTERIAL OUTER MEMBRANE PROTEINS; BASE SEQUENCE; IMMUNODOMINANT EPITOPES; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; PSEUDOGENES; SEQUENCE ANALYSIS;

ACARI; ANAPLASMA MARGINALE; ANIMALIA; BACTERIA (MICROORGANISMS); MAMMALIA; RICKETTSIA; RICKETTSIALES;

EID: 14144250820     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0406656102     Document Type: Article

References (60)

1. Palmer, G. H., Rurangirwa, F. R., Kocan, K. M. & Brown, W. C. (1999) Parasitol. Today 15, 281-286.
2. Kocan, K. M., de la Fuente, J., Guglielmone, A. A. & Melendez, R. D. (2003) Clin. Microbiol. Rev. 16, 698-712.
3. Dumler, J. S., Barbet, A. F., Bekker, C. P., Dasch, G. A., Palmer, G. H., Ray, S. C., Rikihisa, Y. & Rurangirwa, F. R. (2001) Int. J. Syst. Evol. Microbiol. 51, 2145-2165.
4. Andersson, S. G., Zomorodipour, A., Andersson, J. O., Sicheritz-Ponten, T., Alsmark, U. C., Podowski, R. M., Naslund, A. K., Eriksson, A. S., Winkler, H. H. & Kurland, C. G. (1998) Nature 396, 133-140.
5. Ogata, H., Audic, S., Renesto-Audiffren, P., Fournier, P. E., Barbe, V., Samson, D., Roux, V., Cossart, P., Weissenbach, J., Claverie, J. M. & Raoult, D. (2001) Science 293, 2093-2098.
6. Wu, M., Sun, L. V., Vamathevan, J., Riegler, M., Deboy, R., Brownlie, J. C., McGraw, E. A., Martin, W., Esser, C., Ahmadinejad, N., et al. (2004) PLoS Biol. 2, E69.
7. Collins, N. E., Liebenberg, J., de Villiers, E. P., Brayton, K. A., Louw, E., Pretorius, A., Faber, F. E., van Heerden, H., Josemans, A., van Kleef, M., et al. (2005) Proc. Natl. Acad. Sci. USA 102, 838-843.
8. Eriks, I. S., Stiller, D., Goff, W. L., Panton, M., Parish, S. M., McElwain, T. F. & Palmer, G. H. (1994) J. Vet. Diagn. Invest. 6, 435-441.
9. Futse, J. E., Ueti, M. W., Knowles, D. P., Jr., & Palmer, G. H. (2003) J. Clin. Microbiol. 41, 3829-3834.
10. Torioni de Echaide, S., Knowles, D. P., McGuire, T. C., Palmer, G. H., Suarez. C. E. & McElwain, T. F. (1998) J. Clin. Microbiol. 36, 777-782.
11. Brayton, K. A., Knowles, D. P., McGuire, T. C. & Palmer, G. H. (2001) Proc. Natl. Acad. Sci. USA 98, 4130-4135.
12. Ewing, B. & Green, P. (1998) Genome Res. 8, 186-194.
13. Ewing, B., Hillier, L., Wendl, M. C. & Green, P. (1998) Genome Res. 8, 175-185.
14. Rurangirwa, F. R., Brayton, K. A., McGuire, T. C., Knowles, D. P. & Palmer, G. H. (2002) Int. J. Syst. Evol. Microbiol. 52, 1405-1409.
15. Delcher, A. L., Harmon, D., Kasif, S., White, O. & Salzberg, S. L. (1999) Nucleic Acids Res. 27, 4636-4641.
16. Frishman, D., Mironov, A., Mewes, H. W. & Gelfand, M. (1998) Nucleic Acids Res. 26, 2941-2947.
17. Altschul, S. F., Gish, W., Miller, W., Myers, E. W. & Lipman, D. J. (1990) J. Mol. Biol. 215, 403-410.
18. Dyrlov Bendtsen, J., Nielsen, H., Von Heijne, G. & Brunak, S. (2004) J. Mol. Biol. 340, 783-795.
19. Bateman, A., Coin, L., Durbin, R., Finn, R. D., Hollich, V., Griffiths-Jones, S., Khanna, A., Marshall, M., Moxon, S., Sonnhammer, E. L., et al. (2004) Nucleic Acids Res. 32, D138-D141.
20. Tatusov, R. L., Koonin, E. V. & Lipman, D. J. (1997) Science 278, 631-637.
21. Kurtz, S., Choudhuri, J. V., Ohlebusch, E., Schleiermacher, C., Stoye, J. & Giegerich, R. (2001) Nucleic Acids Res. 29, 4633-4642.
22. Lowe, T. M. & Eddy, S. R. (1997) Nucleic Acids Res. 25, 955-964.
23. Lobry, J. R. (1996) Mol. Biol. Evol. 13, 660-665.
24. Kanehisa, M. & Goto, S. (2000) Nucleic Acids Res. 28, 27-30.
25. Karp, P. D., Riley, M., Saier, M., Paulsen, I. T., Collado-Vides, J., Paley, S. M., Pellegrini-Toole, A., Bonavides, C. & Gama-Castro, S. (2002) Nucleic Acids Res. 30, 56-58.
26. Alleman, A. R., Kamper, S. M., Viseshakul, N. & Barbet, A. F. (1993) J. Gen. Microbiol. 139, 2439-2444.
27. Salzberg, S. L., Salzberg, A. J., Kerlavage, A. R. & Tomb, J. F. (1998) Gene 217, 57-67.
28. Brayton, K. A., Palmer, G. H., Lundgren, A., Yi, J. & Barbet, A. F. (2002) Mol. Microbiol. 43, 1151-1159.
29. Meeus, P. F., Brayton, K. A., Palmer, G. H. & Barbet, A. F. (2003) Mol. Microbiol. 47, 633-643.
30. Barbet, A. F., Meeus, P. F., Belanger, M., Bowie, M. V., Yi, J., Lundgren, A. M., Alleman, A. R., Wong, S. J., Chu, F. K., Munderloh, U. G. & Jauron, S. D. (2003) Infect. Immun. 71, 1706-1718.
31. Tettelin, H., Saunders, N. J., Heidelberg, J., Jeffries, A. C., Nelson, K. E., Eisen, J. A., Ketchum, K. A., Hood, D. W., Peden, J. F., Dodson, R. J., et al. (2000) Science 287, 1809-1815.
32. Fraser, C. M., Casjens, S., Huang, W. M., Suhon, G. G., Clayton, R., Lathigra, R., White, O., Ketchum, K. A., Dodson, R., Hickey, E. K., et al. (1997) Nature 390, 580-586.
33. Vidotto, M. C., McGuire, T. C., McElwain, T. F., Palmer, G. H. & Knowles, D. P., Jr. (1994) Infect. Immun. 62, 2940-2946.
34. French, D. M., Brown, W. C. & Palmer, G. H. (1999) Infect. Immun. 67, 5834-5840.
35. French, D. M., McElwain, T. F., McGuire, T. C. & Palmer, G. H. (1998) Infect. Immun. 66, 1200-1207.
36. Brayton, K. A., Meeus, P. F., Barbet, A. F. & Palmer, G. H. (2003) Infect. Immun. 71, 6627-6632.
37. Brown, W. C., Brayton, K. A., Styer, C. M. & Palmer, G. H. (2003) J. Immunol. 170, 3790-3798.
38. Palmer, G. H., Eid, G., Barbet, A. F., McGuire, T. C. & McElwain, T. F. (1994) Infect. Immun. 62, 3808-3816.
39. Barbet, A. F., Lundgren, A., Yi, J., Rurangirwa, F. R. & Palmer, G. H. (2000) Infect. Immun. 68, 6133-6138.
40. Lohr, C. V., Brayton, K. A., Shkap, V., Molad, T., Barbet, A. F., Brown, W. C. & Palmer, G. H. (2002) Infect. Immun. 70, 6005-6012.
41. van Heerden, H., Collins, N. E., Brayton, K. A., Rademeyer, C. & Allsopp, B. A. (2004) Gene 330, 159-168.
42. Ohashi, N., Unver, A., Zhi, N. & Rikihisa, Y. (1998) J. Clin. Microbiol. 36, 2671-2680.
43. Ohashi, N., Zhi, N., Zhang, Y. & Rikihisa, Y. (1998) Infect. Immun. 66, 132-139.
44. Lohr, C. V., Brayton, K. A., Barbet, A. F. & Palmer, G. H. (2004) Gene 325, 115-121.
45. Schofield, M. J. & Hsieh, P. (2003) Annu. Rev. Microbiol. 57, 579-608.
46. Oberle, S. M. & Barbet, A. F. (1993) Gene 136, 291-294.
47. Palmer, G. H., Rurangirwa, F. R. & McElwain, T. F. (2001) J. Clin. Microbiol. 39, 631-635.
48. Palmer, G. H., Barbet, A. F., Davis, W. C. & McGuire, T. C. (1986) Science 231, 1299-1302.
49. Viseshakul, N., Kamper, S., Bowie, M. V. & Barbet, A. F. (2000) Gene 253, 45-53.
50. Brown, W. C., McGuire, T. C., Zhu, D., Lewin, H. A., Sosnow, J. & Palmer, G. H. (2001) J. Immunol. 166, 1114-1124.
51. Alleman, A. R., Palmer, G. H., McGuire, T. C., McElwain, T. F., Perryman, L. E. & Barbet, A. F. (1997) Infect. Immun. 65, 156-163.
52. Oberle, S. M., Palmer, G. H., Barbet, A. F. & McGuire, T. C. (1988) Infect. Immun. 56, 1567-1573.
53. Blouin, E. F., Saliki, J. T., de la Fuente, J., Garcia-Garcia, J. C. & Kocan, K. M. (2003) Vet. Parasitol. 111, 247-260.
54. Kocan, K. M., Halbur, T., Blouin, E. F., Onet, V., de la Fuente, J., Garcia-Garcia, J. C. & Saliki, J. T. (2001) Vet. Parasitol 102, 151-161.
55. Brown, W. C., Palmer, G. H., Lewin, H. A. & McGuire, T. C. (2001) Infect. Immun. 69, 6853-6862.
56. Brown, W. C., Shkap, V., Zhu, D., McGuire, T. C., Tuo, W., McElwain, T. F. & Palmer, G. H. (1998) Infect. Immun. 66, 5406-5413.
57. Barbet, A. F., Palmer, G. H., Myler, P. J. & McGuire, T. C. (1987) Infect. Immun. 55, 2428-2435.
58. Stich, R. W., Olah, G. A., Brayton, K. A., Brown, W. C., Fecheimer, M., Green-Church, K., Jittapalapong, S., Kocan, K. M., McGuire, T. C., Rurangirwa, F. R. & Palmer, G. H. (2004) Infect. Immun. 72, 7257-7264.
59. Ohashi, N., Zhi, N., Lin, Q. & Rikihisa, Y. (2002) Infect. Immun. 70, 2128-2138.
60. Lin, M. & Rikihisa, Y. (2003) Infect. Immun. 71, 5324-5331.