Vps20p and Vta1p interact with Vps4p and function in multivesicular body sorting and endosomal transport in Saccharomyces cerevisiae

Journal of Cell Science

Volumn 116, Issue 19, 2003, Pages 3957-3970

  Yeo, Sebastian C L ^a   Xu, Linghui ^a   Ren, Jihui ^a,c   Boulton, Victoria J ^a   Wagle, Mahendra D ^a,e   Liu, Cong ^a,f   Ren, Gang ^a,d   Wong, Peisze ^a   Zahn, Regina ^a,g   Sasajala, Piriya ^a,h   Yang, Hongyuan ^b   Piper, Robert C ^c   Munn, Alan L ^a,b,d  

^a NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

^b NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

^c UNIVERSITY OF IOWA   (United States)

^d UNIVERSITY OF QUEENSLAND   (Australia)

^e TEMASEK LIFE SCIENCES LABORATORY   (Singapore)

^f UNIVERSITY OF SUSSEX   (United Kingdom)

^g GERMAN CANCER RESEARCH CENTER DKFZ   (Germany)

^h UNIVERSITY OF EDINBURGH   (United Kingdom)

Author keywords

AAA ATPase; Chediak Higashi syndrome; Endocytosis; Endosome; Lysosome; LYST beige

Indexed keywords

ADENOSINE TRIPHOSPHATE; CARBOXYPEPTIDASE C; MUTANT PROTEIN; SACCHAROMYCES CEREVISIAE PROTEIN;

ARTICLE; BINDING AFFINITY; CARBOXY TERMINAL SEQUENCE; CELL VACUOLE; CONTROLLED STUDY; ENDOSOME; ENZYME RELEASE; GENE DELETION; GENETIC DATABASE; IN VITRO STUDY; INTRACELLULAR TRANSPORT; NONHUMAN; OPEN READING FRAME; PHENOTYPE; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN DOMAIN; PROTEIN FUNCTION; PROTEIN HYDROLYSIS; PROTEIN ISOLATION; PROTEIN PROTEIN INTERACTION; PROTEIN SYNTHESIS; PROTEIN TARGETING; PROTEIN TRANSPORT; REGULATORY MECHANISM; SACCHAROMYCES CEREVISIAE;

ADENOSINE TRIPHOSPHATASES; ADENOSINE TRIPHOSPHATE; BIOLOGICAL TRANSPORT; CARBOXYPEPTIDASES; CARRIER PROTEINS; CLONING, MOLECULAR; ENDOSOMES; MEMBRANE PROTEINS; MUTATION; PROTEIN BINDING; PROTEIN STRUCTURE, TERTIARY; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; TRANSPORT VESICLES; TWO-HYBRID SYSTEM TECHNIQUES; VESICULAR TRANSPORT PROTEINS;

SACCHAROMYCES; SACCHAROMYCES CEREVISIAE;

EID: 12444278931     PISSN: 00219533     EISSN: None     Source Type: Journal    
DOI: 10.1242/jcs.00751     Document Type: Article

References (47)

1. Adams, A., Gottschling, D., E., Kaiser, C. A. and Stearns, T. (1997). Methods in Yeast Genetics. A Cold Spring Harbor Laboratory Course Manual. Cold Spring Harbor, NY, USA: Cold Spring Harbor Laboratory Press.
2. Amerik, A. Y., Nowak, J., Swaminathan, S. and Hochstrasser, M. (2000). The Doa4 deubiquitinating enzyme is functionally linked to the vacuolar protein-sorting and endocytic pathways. Mol. Biol. Cell 11, 3365-3380.
3. Ashrafi, K., Farazi, T. A. and Gordon, J. I. (1998). A role for Saccharomyces cerevisiae fatty acid activation protein 4 in regulating protein N-myristoylation during entry into stationary phase. J. Biol. Chem. 273, 25864-25874.
4. Babst, M., Sato, T. K., Banta, L. M. and Emr, S. D. (1997). Endosomal transport function in yeast requires a novel AAA-type ATPase, Vps4p. EMBO J. 16, 1820-1831.
5. Babst, M., Wendland, B., Estepa, E. J. and Emr, S. D. (1998). The Vps4p AAA ATPase regulates membrane association of a Vps protein complex required for normal endosome function. EMBO J. 17, 2982-2993.
6. Babst, M., Katzmann, D. J., Estepa-Sabal, E. J., Meerloo, T. and Emr, S. D. (2002). ESCRT-III: an endosome-associated heterooligomeric protein complex required for MVB sorting. Dev. Cell 3, 271-282.
7. Bilodeau, P. S., Urbanowski, J. L., Winistorfer, S. C. and Piper, R. C. (2002). The Vps27p-Hselp complex binds ubiquitin and mediates endosomal protein sorting. Nat. Cell Biol. 4, 534-539.
8. Bishop, N. and Woodman, P. (2000). ATPase-defective mammalian VPS4 localizes to aberrant endosomes and impairs cholesterol trafficking. Mol. Biol. Cell 11, 227-239.
9. Bryant, N. J. and Stevens, T. H. (1998). Vacuole biogenesis in Saccharomyces cerevisiae, protein transport pathways to the yeast vacuole. Microbiol. Mol. Biol. Rev. 62, 230-247.
10. Cashikar, A. G., Schirmer, E. C., Hattendorf, D. A., Glover, J. R., Ramakrishnan, M. S., Ware, D. M. and Lindquist, S. L. (2002). Defining a pathway of communication from the C-terminal peptide binding domain to the N-terminal ATPase domain in a AAA protein. Mol. Cell 9, 751-760.
11. Cereghino, J. L., Marcusson, E. G. and Emr, S. D. (1995). The cytoplasmic tail domain of the vacuolar protein sorting receptor Vps10p and a subset of VPS gene products regulate receptor stability, function, and localization. Mol. Biol. Cell 6, 1089-1102.
12. Davis, N. G., Horecka, J. L. and Sprague, G. F., Jr (1993). Cis- and transacting functions required for endocytosis of the yeast pheromone receptors. J. Cell Biol. 122, 53-65.
13. Dower, W. J., Miller, J. F. and Ragsdale, C. W. (1988). High efficiency transformation of E. coli by high voltage electroporation. Nucleic Acids Res. 16, 6127-6145.
14. Dulic, V., Egerton, M., Eiguindi, I., Raths, S., Singer, B. and Riezman, H. (1991). Yeast endocytosis assays. Methods Enzymol. 194, 697-710.
15. Finken-Eigen, M., Rohricht, R. A. and Kohrer, K. (1997). The VPS4 gene is involved in protein transport out of a yeast pre-vacuolar endosome-like compartment. Curr. Genet. 31, 469-480.
16. Forsberg, H., Hammar, M., Andreasson, C., Moliner, A. and Ljungdahl, P. O. (2001). Suppressors of ssy1 and ptr3 null mutations define novel amino acid sensor-independent genes in Saccharomyces cerevisiae. Genetics 158, 973-988.
17. Gietz, R. D. and Sugino, A. (1988). New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites. Gene 74, 527-534.
18. Gyuris, J., Golemis, E., Chertkov, H. and Brent, R. (1993). Cdi1, a human G1 and S phase protein phosphatase that associates with Cdk2. Cell 75, 791-803.
19. Hanson, P. K., Grant, A. M. and Nichols, J. W. (2002). NBD-labeled phosphatidylcholine enters the yeast vacuole via the pre-vacuolar compartment. J Cell Sci. 115, 2725-2733.
20. Hicke, L., Zanolari, B., Pypaert, M., Rohrer, J. and Riezman, H. (1997). Transport through the yeast endocytic pathway occurs through morphologically distinct compartments and requires an active secretory pathway and Sec18p/N-ethylmaleimide-sensitive fusion protein. Mol. Biol. Cell 8, 13-31.
21. Howard, T. L., Stauffer, D. R., Degnin, C. R. and Hollenberg, S. M. (2001). CHMP1 functions as a member of a newly defined family of vesicle trafficking proteins. J. Cell Sci. 114, 2395-2404.
22. Katzmann, D. J., Babst, M. and Emr, S. D. (2001). Ubiquitin-dependent sorting into the multivesicular body pathway requires the function of a conserved endosomal protein sorting complex, ESCRT-1. Cell 106, 145-155.
23. Katzmann, D. J., Odorizzi, G. and Emr, S. D. (2002). Receptor downregulation and multivesicular-body sorting. Nat. Rev. 3, 893-905.
24. Kranz, A., Kinner, A. and Kolling, R. (2001). A family of small coiled-coil-forming proteins functioning at the late endosome in yeast. Mol. Biol. Cell 12, 711-723.
25. Kübler, E. and Riezman, H. (1993). Actin and fimbrin are required for the internalisation step of endocytosis in yeast. EMBO J. 12, 2855-2862.
26. Longtine, M. S., McKenzie, A., DeMarini, D. J., Shah, N. G., Wach, A., Brachat, A., Philippsen, P. and Pringle, J. R. (1998). Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae. Yeast 14, 953-961.
27. Lupas, A., Van Dyke, M. and Stock, J. (1991). Predicting coiled coils from protein sequences. Science 252, 1162-1164.
28. Mellman, I. (1996). Endocytosis and molecular sorting. Annu. Rev. Cell Dev. Biol. 12, 575-625.
29. Mulholland, J., Konopka, J., Singer-Krüger, B., Zerial, M. and Botstein, D. (1999). Visualization of receptor-mediated endocytosis in yeast. Mol. Biol. Cell 10, 799-817.
30. +-ATPase-defective yeast, identification of six new END genes. J. Cell Biol. 127, 373-386.
31. Munn, A. L., Stevenson, B. J., Geli, M. I. and Riezman, H. (1995). end5, end6, and end7, mutations that cause actin delocalization and block the internalization step of endocytosis in Saccharomyces cerevisiae. Mol. Biol. Cell 6, 1721-1742.
32. Munn, A. L., Heese-Peck, A., Stevenson, B. J., Pichler, H. and Riezman, H. (1999). Specific sterols required for the internalization step of endocytosis in yeast. Mol. Biol. Cell 10, 3943-3957.
33. Munn, A. L. (2000). The yeast endocytic membrane transport system. Microsc. Res. Tech. 51, 547-562.
34. Nagiec, E. E., Bernstein, A. and Whiteheart, S. W. (1995). Each domain of the N-ethylmaleimide-sensitive fusion protein contributes to its transport activity. J. Biol. Chem. 270, 29182-29188.
35. Odorizzi, G., Babst, M. and Emr, S. D. (1998). Fab1p PtdIns(3)P 5-kinase function essential for protein sorting in the multivesicular body. Cell 95, 847-858.
36. Piper, R. C., Cooper, A. A., Yang, H. and Stevens, T. H. (1995). VPS27 controls vacuolar and endocytic traffic through a prevacuolar compartment in Saccharomyces cerevisiae. J Cell Biol. 131, 603-617.
37. Piper, R. C. and Luzio, J. P. (2001). Late endosomes: sorting and partitioning in multivesicular bodies. Traffic 2, 612-621.
38. Prescianotto-Baschong, C. and Riezman, H. (1998). Morphology of the yeast endocytic pathway. Mol. Biol. Cell 9, 173-189.
39. Prescianotto-Baschong, C. and Riezman, H. (2002). Ordering of compartments in the yeast endocytic pathway. Traffic 3, 37-49.
40. Raymond, C. K., Howald-Stevenson, I., Vater, C. A. and Stevens, T. H. (1992). Morphological classification of the yeast vacuolar protein sorting mutants, evidence for a prevacuolar compartment in class E vps mutants. Mol. Biol. Cell 3, 1389-1402.
41. Reggiori, F. and Pelham, H. R. (2001). Sorting of proteins into multivesicular bodies: ubiquitin-dependent and -independent targeting. EMBO J. 20, 5176-5186.
42. Rieder, S. E., Banta, L. M., Kohrer, K., McCaffery, J. M. and Emr, S. D. (1996). Multilamellar endosome-like compartment accumulates in the yeast vps28 vacuolar protein sorting mutant. Mol. Biol. Cell 7, 985-999.
43. Tchernev, V. T., Mansfield, T. A., Giot, L., Kumar, A. M., Nandabalan, K., Li, Y., Mishra, V. S., Detter, J. C., Rothberg, J. M. and Wallace, M. R. et al. (2002). The Chediak-Higashi protein interacts with SNARE complex and signal transduction proteins. Mol. Med. 8, 56-64.
44. Uetz, P., Giot, L., Cagney, G., Mansfield, T. A., Judson, R. S., Knight, J. R., Lockshon, D., Narayan, V., Srinivasan, M. and Pochart, P. et al. (2000). A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae. Nature 403, 623-627.
45. Urbanowski, J. L. and Piper, R. C. (2001). Ubiquitin sorts proteins into the intralumenal degradative compartment of the late-endosome/vacuole. Traffic 2, 622-630.
46. Vida, T. A. and Emr, S. D. (1995). A new vital stain for visualizing vacuolar membrane dynamics and endocytosis in yeast. J. Cell Biol. 128, 779-792.
47. Zahn, R., Stevenson, B. J., Schröder-Köhne, S., Zanolari, B., Riezman, H. and Munn, A. L. (2001). End13p/Vps4p is required for efficient transport from early to late endosomes in Saccharomyces cerevisiae. J. Cell Sci. 114, 1935-1947.