-
1
-
-
0031018084
-
Probing the non-covalent structure of proteins by amide hydrogen exchange and mass spectrometry
-
Smith DL, Deng YZ, Zhang ZQ. Probing the non-covalent structure of proteins by amide hydrogen exchange and mass spectrometry. J. Mass Spectrom. 1997; 32: 135.
-
(1997)
J. Mass Spectrom.
, vol.32
, pp. 135
-
-
Smith, D.L.1
Deng, Y.Z.2
Zhang, Z.Q.3
-
2
-
-
0035563698
-
The methanol-induced conformational transitions of beta-lactoglobulin, cytochrome c, and ubiquitin at low pH: A study by electrospray ionization mass spectrometry
-
Babu KR, Moradian A, Douglas DJ. The methanol-induced conformational transitions of beta-lactoglobulin, cytochrome c, and ubiquitin at low pH: A study by electrospray ionization mass spectrometry. J. Am. Soc. Mass Spectrom. 2001; 12: 317.
-
(2001)
J. Am. Soc. Mass Spectrom.
, vol.12
, pp. 317
-
-
Babu, K.R.1
Moradian, A.2
Douglas, D.J.3
-
3
-
-
0037188386
-
Protein conformations explored by difference high-angle solution x-ray scattering: Oxidation state and temperature dependent changes in cytochrome C
-
Tiede DM, Zhang RT, Seifert S. Protein conformations explored by difference high-angle solution x-ray scattering: Oxidation state and temperature dependent changes in cytochrome C. Biochemistry 2002; 41: 6605.
-
(2002)
Biochemistry
, vol.41
, pp. 6605
-
-
Tiede, D.M.1
Zhang, R.T.2
Seifert, S.3
-
4
-
-
0026653655
-
Protein folding studied using hydrogen-exchange labeling and two-dimensional NMR
-
Englander SW, Mayne L. Protein folding studied using hydrogen-exchange labeling and two-dimensional NMR. Annu. Rev. Biophys. Biomol. Struct. 1992; 21: 243.
-
(1992)
Annu. Rev. Biophys. Biomol. Struct.
, vol.21
, pp. 243
-
-
Englander, S.W.1
Mayne, L.2
-
5
-
-
2542532173
-
Assignments of carbon NMR resonances for microcrystalline ubiquitin
-
Igumenova TI, McDermott AE, Zilm KW, Martin RW, Paulson EK, Wand AJ. Assignments of carbon NMR resonances for microcrystalline ubiquitin. J. Am. Chem. Soc. 2004; 126: 6720.
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 6720
-
-
Igumenova, T.I.1
McDermott, A.E.2
Zilm, K.W.3
Martin, R.W.4
Paulson, E.K.5
Wand, A.J.6
-
6
-
-
2442717620
-
Completely automated, highly error-tolerant macromolecular structure determination from multidimensional nuclear overhauser enhancement spectra and chemical shift assignments
-
Kuszewski J, Schwieters CD, Garrett DS, Byrd RA, Tjandra N, Clore GM. Completely automated, highly error-tolerant macromolecular structure determination from multidimensional nuclear overhauser enhancement spectra and chemical shift assignments. J. Am. Chem. Soc. 2004; 126: 6258.
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 6258
-
-
Kuszewski, J.1
Schwieters, C.D.2
Garrett, D.S.3
Byrd, R.A.4
Tjandra, N.5
Clore, G.M.6
-
7
-
-
0036088602
-
The linkage between protein folding and functional cooperativity: Two sides of the same coin?
-
Luque I, Leavitt SA, Freire E. The linkage between protein folding and functional cooperativity: Two sides of the same coin? Annu. Rev. Biophys. Biomed. 2002; 31: 235.
-
(2002)
Annu. Rev. Biophys. Biomed.
, vol.31
, pp. 235
-
-
Luque, I.1
Leavitt, S.A.2
Freire, E.3
-
8
-
-
0030657773
-
Protein structure-NMR maps giant molecules as they fold and flutter
-
Balter M. Protein structure-NMR maps giant molecules as they fold and flutter. Science 1997; 278: 1014.
-
(1997)
Science
, vol.278
, pp. 1014
-
-
Balter, M.1
-
9
-
-
0030692048
-
Protein structure-Lining up proteins for NMR
-
Service RF. Service RF. Protein structure-Lining up proteins for NMR. Science 1997; 278: 1015.
-
(1997)
Science
, vol.278
, pp. 1015
-
-
Service, R.F.1
-
10
-
-
0037038365
-
Structure of a protein determined by solid-state magic-angle-spinning NMR spectroscopy
-
Castellani F, van Rossum B, Diehl A, Schubert M, Rehbein K, Oschkinat H. Structure of a protein determined by solid-state magic-angle-spinning NMR spectroscopy. Nature 2002; 420: 98.
-
(2002)
Nature
, vol.420
, pp. 98
-
-
Castellani, F.1
Van Rossum, B.2
Diehl, A.3
Schubert, M.4
Rehbein, K.5
Oschkinat, H.6
-
11
-
-
0018790558
-
Measurement and calibration of peptide group hydrogen-deuterium exchange by ultraviolet spectrophotometry
-
Englander JJ, Calhoun DB, Englander SW. Measurement and calibration of peptide group hydrogen-deuterium exchange by ultraviolet spectrophotometry. Anal. Biochem. 1979; 92: 517.
-
(1979)
Anal. Biochem.
, vol.92
, pp. 517
-
-
Englander, J.J.1
Calhoun, D.B.2
Englander, S.W.3
-
13
-
-
0001119282
-
Infrared measurement of peptide hydrogen exchange in rhodopsin
-
Osborne HB, Nabedryk-Viala E. Infrared measurement of peptide hydrogen exchange in rhodopsin. Methods Enzymol. 1982; 88: 676.
-
(1982)
Methods Enzymol.
, vol.88
, pp. 676
-
-
Osborne, H.B.1
Nabedryk-Viala, E.2
-
14
-
-
1242294450
-
Phosphorylation-induced conformational changes of cystic fibrosis transmembrane conductance regulator monitored by attenuated total reflection-fourier transform IR spectroscopy and fluorescence spectroscopy
-
Grimard V, Li CH, Ramjeesingh M, Bear CE, Goormaghtigh E, Ruysschaert JM. Phosphorylation-induced conformational changes of cystic fibrosis transmembrane conductance regulator monitored by attenuated total reflection-fourier transform IR spectroscopy and fluorescence spectroscopy. J. Biol. Chem. 2004; 279: 5528.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 5528
-
-
Grimard, V.1
Li, C.H.2
Ramjeesingh, M.3
Bear, C.E.4
Goormaghtigh, E.5
Ruysschaert, J.M.6
-
15
-
-
0035846964
-
Electrospray ionization mass spectrometry, circular dichroism and SAXS studies of the (S)-hydroxynitrile lyase from Hevea brasiliensis
-
Hanefeld U, Stranzl G, Straathof AJJ, Heijnen JJ, Bergmann A, Mittelbach R, Glatter O, Kratky C. Electrospray ionization mass spectrometry, circular dichroism and SAXS studies of the (S)-hydroxynitrile lyase from Hevea brasiliensis. Biochim. Biophys. Acta 2001; 1544: 133.
-
(2001)
Biochim. Biophys. Acta
, vol.1544
, pp. 133
-
-
Hanefeld, U.1
Stranzl, G.2
Straathof, A.J.J.3
Heijnen, J.J.4
Bergmann, A.5
Mittelbach, R.6
Glatter, O.7
Kratky, C.8
-
16
-
-
0032918979
-
The compact and expanded denatured conformations of apomyoglobin in the methanol-water solvent
-
Kamatari YO, Ohji S, Konno T, Seki Y, Soda K, Kataoka M, Akasaka K. The compact and expanded denatured conformations of apomyoglobin in the methanol-water solvent. Protein Sci. 1999; 8: 873.
-
(1999)
Protein Sci.
, vol.8
, pp. 873
-
-
Kamatari, Y.O.1
Ohji, S.2
Konno, T.3
Seki, Y.4
Soda, K.5
Kataoka, M.6
Akasaka, K.7
-
17
-
-
0034931126
-
Three-dimensional structures of prion proteins
-
WuthrichK, Riek R. Three-dimensional structures of prion proteins. Adv. Protein Chem. 2001; 57: 55.
-
(2001)
Adv. Protein Chem.
, vol.57
, pp. 55
-
-
Wuthrich, K.1
Riek, R.2
-
18
-
-
0344603844
-
The hydrogen exchange core and protein folding
-
Li RH, Woodward C. The hydrogen exchange core and protein folding. Protein Sci. 1999; 8: 1571.
-
(1999)
Protein Sci.
, vol.8
, pp. 1571
-
-
Li, R.H.1
Woodward, C.2
-
19
-
-
1042299980
-
Native-like conformations are sampled by partially folded and disordered variants of bovine pancreatic trypsin inhibitor
-
Tulla-Puche J, Getun IV, Woodward C, Barany G. Native-like conformations are sampled by partially folded and disordered variants of bovine pancreatic trypsin inhibitor. Biochemistry 2004; 43: 1591.
-
(2004)
Biochemistry
, vol.43
, pp. 1591
-
-
Tulla-Puche, J.1
Getun, I.V.2
Woodward, C.3
Barany, G.4
-
20
-
-
2142647811
-
Conformational dynamics of the GdmHCl-induced molten globule state of creatine kinase monitored by hydrogen exchange and mass spectrometry
-
Mazon H, Marcillat O, Forest E, Smith DL, Vial C. Conformational dynamics of the GdmHCl-induced molten globule state of creatine kinase monitored by hydrogen exchange and mass spectrometry. Biochemistry 2004; 43: 5045.
-
(2004)
Biochemistry
, vol.43
, pp. 5045
-
-
Mazon, H.1
Marcillat, O.2
Forest, E.3
Smith, D.L.4
Vial, C.5
-
21
-
-
1442348875
-
Screening for noncovalent ligand-receptor interactions by electrospray ionization mass spectrometry-based diffusion measurements
-
Clark SM, Konermann L. Screening for noncovalent ligand-receptor interactions by electrospray ionization mass spectrometry-based diffusion measurements. Anal. Chem. 2004; 76: 1257.
-
(2004)
Anal. Chem.
, vol.76
, pp. 1257
-
-
Clark, S.M.1
Konermann, L.2
-
22
-
-
0038293125
-
Quantification of protein-ligand interactions by mass spectrometry, titration, and H/D exchange: PLIMSTEX
-
Zhu MM, Rempel DL, Du ZH, Gross ML. Quantification of protein-ligand interactions by mass spectrometry, titration, and H/D exchange: PLIMSTEX. J. Am. Chem. Soc. 2003; 125: 5252.
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 5252
-
-
Zhu, M.M.1
Rempel, D.L.2
Du, Z.H.3
Gross, M.L.4
-
23
-
-
0035840988
-
Site-specific amide hydrogen/deuterium exchange in E-coli thioredoxins measured by electrospray ionization mass spectrometry
-
Kim MY, Maier CS, Reed DJ, Deinzer ML. Site-specific amide hydrogen/deuterium exchange in E-coli thioredoxins measured by electrospray ionization mass spectrometry. J. Am. Chem. Soc. 2001; 123: 9860.
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 9860
-
-
Kim, M.Y.1
Maier, C.S.2
Reed, D.J.3
Deinzer, M.L.4
-
24
-
-
0035878163
-
Measurements of protein stability by H/D exchange and matrix-assisted laser desorption ionization mass spectrometry using picomoles of material
-
Powell KD, Fitzgerald MC. Measurements of protein stability by H/D exchange and matrix-assisted laser desorption ionization mass spectrometry using picomoles of material. Anal. Chem. 2001; 73: 3300.
-
(2001)
Anal. Chem.
, vol.73
, pp. 3300
-
-
Powell, K.D.1
Fitzgerald, M.C.2
-
25
-
-
0034494322
-
Characterization of the interface structure of enzyme-inhibitor complex by using hydrogen-deuterium exchange and electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry
-
Akashi S, Takio K. Characterization of the interface structure of enzyme-inhibitor complex by using hydrogen-deuterium exchange and electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry. Protein Sci. 2000; 9: 2497.
-
(2000)
Protein Sci.
, vol.9
, pp. 2497
-
-
Akashi, S.1
Takio, K.2
-
26
-
-
0034506739
-
Sequencing of a branched peptide using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
-
Fournier I, Chaurand P, Bolbach G, Lutzenkirchen F, Spengler B, Tabet JC. Sequencing of a branched peptide using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. J. Mass Spectrom. 2000; 35: 1425.
-
(2000)
J. Mass Spectrom.
, vol.35
, pp. 1425
-
-
Fournier, I.1
Chaurand, P.2
Bolbach, G.3
Lutzenkirchen, F.4
Spengler, B.5
Tabet, J.C.6
-
27
-
-
0033473760
-
Matrix-assisted laser desorption ionization hydrogen/deuterium exchange studies to probe peptide conformational changes
-
Figueroa ID, Russell DH. Matrix-assisted laser desorption ionization hydrogen/deuterium exchange studies to probe peptide conformational changes. J. Am. Soc. Mass Spectrom. 1999; 10: 719.
-
(1999)
J. Am. Soc. Mass Spectrom.
, vol.10
, pp. 719
-
-
Figueroa, I.D.1
Russell, D.H.2
-
28
-
-
2442680075
-
Mass spectrometry of hydrogen/deuterium exchange of Escherichia coli dihydrofolate reductase: Effects of loop mutations
-
Yamamoto T, Izumi S, Ohmae E, Gekko K. Mass spectrometry of hydrogen/deuterium exchange of Escherichia coli dihydrofolate reductase: Effects of loop mutations. J. Biochem. 2004; 135: 487.
-
(2004)
J. Biochem.
, vol.135
, pp. 487
-
-
Yamamoto, T.1
Izumi, S.2
Ohmae, E.3
Gekko, K.4
-
29
-
-
1842558963
-
High-throughput screening assay for the tunable selection of protein ligands
-
Powell KD, Fitzgerald MC. High-throughput screening assay for the tunable selection of protein ligands. J. Comb. Chem. 2004; 6: 262.
-
(2004)
J. Comb. Chem.
, vol.6
, pp. 262
-
-
Powell, K.D.1
Fitzgerald, M.C.2
-
30
-
-
0007501806
-
Hydrogen/deuterium exchange electrospray ionization mass spectrometry: A method for probing protein conformational changes in solution
-
Katta V, Chait BT. Hydrogen/deuterium exchange electrospray ionization mass spectrometry: a method for probing protein conformational changes in solution. J. Am. Chem. Soc. 1993; 115: 6317.
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 6317
-
-
Katta, V.1
Chait, B.T.2
-
31
-
-
0030199899
-
Mass spectrometric determination of isotopic exchange rates of amide hydrogens located on the surfaces of proteins
-
Dharmasiri K, Smith DL. Mass spectrometric determination of isotopic exchange rates of amide hydrogens located on the surfaces of proteins. Anal. Chem. 1996; 68: 2340.
-
(1996)
Anal. Chem.
, vol.68
, pp. 2340
-
-
Dharmasiri, K.1
Smith, D.L.2
-
32
-
-
0029161284
-
Mass spectrometric characterization of a protein-ligand interaction
-
Anderegg RJ, Wagner DS. Mass spectrometric characterization of a protein-ligand interaction. J. Am. Chem. Soc. 1995; 177: 1374.
-
(1995)
J. Am. Chem. Soc.
, vol.177
, pp. 1374
-
-
Anderegg, R.J.1
Wagner, D.S.2
-
33
-
-
0030015420
-
alpha-Helical, but not beta-sheet, propensity of proline is determined by peptide environment
-
Li SC, Goto NK, Williams KA, Deber CM. alpha-Helical, but not beta-sheet, propensity of proline is determined by peptide environment. Proc. Natl. Acad. Sci. USA 1996; 93: 6676.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 6676
-
-
Li, S.C.1
Goto, N.K.2
Williams, K.A.3
Deber, C.M.4
-
34
-
-
0036158423
-
Effect of organic solvents on stability and activity of two related alcohol dehydrogenases: A comparative study
-
Miroliaei M, Nemat-Gorgani M. Effect of organic solvents on stability and activity of two related alcohol dehydrogenases: a comparative study. Int. J. Biochem. Cell B 2002; 34: 169.
-
(2002)
Int. J. Biochem. Cell B
, vol.34
, pp. 169
-
-
Miroliaei, M.1
Nemat-Gorgani, M.2
-
35
-
-
0029917563
-
Molten globule-like state of cytochrome c under conditions simulating those near the membrane surface
-
Bychkova VE, Dujsekina AE, Klenin SI, Tiktopulo EI, Uversky VN, Ptitsyn OB. Molten globule-like state of cytochrome c under conditions simulating those near the membrane surface. Biochemistry 1996; 35: 6058.
-
(1996)
Biochemistry
, vol.35
, pp. 6058
-
-
Bychkova, V.E.1
Dujsekina, A.E.2
Klenin, S.I.3
Tiktopulo, E.I.4
Uversky, V.N.5
Ptitsyn, O.B.6
-
36
-
-
0034673982
-
Conformational modulation of human cytochrome P450 2E1 by ethanol and other substrates: A CO flash photolysis study
-
Smith SV, Koley AP, Dai RK, Robinson RC, Leong H, Markowitz A, Friedman FK. Conformational modulation of human cytochrome P450 2E1 by ethanol and other substrates: A CO flash photolysis study. Biochemistry 2000; 39: 5731.
-
(2000)
Biochemistry
, vol.39
, pp. 5731
-
-
Smith, S.V.1
Koley, A.P.2
Dai, R.K.3
Robinson, R.C.4
Leong, H.5
Markowitz, A.6
Friedman, F.K.7
-
37
-
-
0035158244
-
Metal-catalyzed oxidation of human growth hormone: Modulation by solvent-induced changes of protein conformation
-
Hovorka SW, Hong JY, Cleland JL, Schoneich C. Metal-catalyzed oxidation of human growth hormone: Modulation by solvent-induced changes of protein conformation. J. Pharm. Sci. 2001; 90: 58.
-
(2001)
J. Pharm. Sci.
, vol.90
, pp. 58
-
-
Hovorka, S.W.1
Hong, J.Y.2
Cleland, J.L.3
Schoneich, C.4
-
38
-
-
0029893286
-
The methanol-induced globular and expanded denatured states of cytochrome c: A study by CD fluorescence, NMR and small-angle X-ray scattering
-
Kamatari YO, Konno T, Kataoka M, Akasaka K. The methanol-induced globular and expanded denatured states of cytochrome c: A study by CD fluorescence, NMR and small-angle X-ray scattering. J. Mol. Biol. 1996; 259: 512.
-
(1996)
J. Mol. Biol.
, vol.259
, pp. 512
-
-
Kamatari, Y.O.1
Konno, T.2
Kataoka, M.3
Akasaka, K.4
-
39
-
-
0028978422
-
Trifuoroethanol-in-ducedstabilization of the K-helical structure of L-lactoglo-bulin: Implication fornon-hierarchical protein folding
-
Shiraki K, Nishikawa K, Goto Y. Trifuoroethanol-in-ducedstabilization of the K-helical structure of L-lactoglo-bulin: implication fornon-hierarchical protein folding. J. Mol. Biol. 1995; 245: 180.
-
(1995)
J. Mol. Biol.
, vol.245
, pp. 180
-
-
Shiraki, K.1
Nishikawa, K.2
Goto, Y.3
-
40
-
-
0035859878
-
A two-process model describes the hydrogen exchange behavior of cytochrome c in the molten globule state with various extents of acetylation
-
Szewczuk Z, Konishi Y, Goto Y. A two-process model describes the hydrogen exchange behavior of cytochrome c in the molten globule state with various extents of acetylation. Biochemistry 2001; 40: 9623.
-
(2001)
Biochemistry
, vol.40
, pp. 9623
-
-
Szewczuk, Z.1
Konishi, Y.2
Goto, Y.3
-
41
-
-
0035943398
-
Probing subtle differences in the hydrogen exchange behavior of variants of the human alpha-lactalbumin molten globule using mass spectrometry
-
Last AM, Schulman BA, Robinson CV, Redfield C. Probing subtle differences in the hydrogen exchange behavior of variants of the human alpha-lactalbumin molten globule using mass spectrometry. J. Mol. Biol. 2001; 311: 909.
-
(2001)
J. Mol. Biol.
, vol.311
, pp. 909
-
-
Last, A.M.1
Schulman, B.A.2
Robinson, C.V.3
Redfield, C.4
-
42
-
-
0030069246
-
Study of the new stability properties induced by amino acid replacement of tyrosine 64 in cytochrome c(553) from Desulfovibrio vulgaris Hildenborough using electrospray ionization mass spectrometry
-
Guy P, Remigy H, Jaquinod M, Bersch B, Blanchard L, Dolla A, Forest E. Study of the new stability properties induced by amino acid replacement of tyrosine 64 in cytochrome c(553) from Desulfovibrio vulgaris Hildenborough using electrospray ionization mass spectrometry. Biochem. Biophys. Res. Commun. 1996; 218: 97.
-
(1996)
Biochem. Biophys. Res. Commun.
, vol.218
, pp. 97
-
-
Guy, P.1
Remigy, H.2
Jaquinod, M.3
Bersch, B.4
Blanchard, L.5
Dolla, A.6
Forest, E.7
-
44
-
-
0022426014
-
Protein hydrogen exchange studied by the fragment separation method
-
Englander JJ, Rogero JR, Englander SW. Protein hydrogen exchange studied by the fragment separation method. Anal. Biochem. 1985; 147: 234.
-
(1985)
Anal. Biochem.
, vol.147
, pp. 234
-
-
Englander, J.J.1
Rogero, J.R.2
Englander, S.W.3
|