Three-dimensional cryoelectron microscopy of ribosomes

Methods in Enzymology

Volumn 317, Issue , 2000, Pages 276-291

  Frank, Joachim ^a   Penczek, Pawel ^a   Agrawal, Rajendra K ^a   Grassucci, Robert A ^a   Heagle, Amy B ^a  

^a NONE

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPLEX FORMATION; CRYOELECTRON MICROSCOPY; ELECTRON MICROSCOPY; IMAGE PROCESSING; IMAGE RECONSTRUCTION; NONHUMAN; PRIORITY JOURNAL; RIBOSOME;

EID: 0034053676     PISSN: 00766879     EISSN: None     Source Type: Book Series    
DOI: 10.1016/s0076-6879(00)17020-x     Document Type: Article

References (53)

1. J. Frank, P. Penczek, R. A. Grassucci, and S. Srivastava, J. Cell Biol. 115, 597 (1991).
2. P. Penczek, R. A. Grassucci, and J. Frank, Ultramicroscopy 53, 251 (1994).
3. J. Frank, J. Zhu, P. Penczek, Y. Li, S. Srivastava, A. Verschoor, M. Radermacher, R. A. Grassucci, R. K. Lata, and R. K. Agrawal, Nature 376, 441 (1995).
4. H. Stark, F. Müller, E. A. Orlova, M. Schatz, P. Dube, T. Erdemir, F. Zemlin, R. Brimacombe, and M. van Heel, Structure 3, 815 (1995).
5. R. K. Lata, R. K. Agrawal, P. Penczek, R. A. Grassucci, J. Zhu, and J. Frank, J. Mol. Biol. 153, 979 (1996).
6. I. S. Gabashvili, R. K. Agrawal, R. A. Grassucci, and J. Frank, J. Mol. Biol. 5, 1285 (1999).
7. R. K. Agrawal, P. Penczek, R. A. Grassucci, Y. Li, A. Leith, K. H. Nierhaus, and J. Frank, Science 271, 1000 (1996).
8. H. Stark, E. A. Orlova, J. Rinke-Appel, N. Jünke, F. Müller, M. Rodnina, W. Wintermeyer, R. Brimacombe, and M. van Heel, Cell 88, 19 (1997a).
9. H. Stark, M. Rodnina, J. Rinke-Appel, R. Brimacombe, W. Wintermeyer, and M. van Heel, Nature 389, 403 (1997b).
10. R. K. Agrawal, P. Penczek, R. A. Grassucci, and J. Frank, Proc. Natl. Acad. Sci. U.S.A. 95, 6134 (1998).
11. A. Malhotra, P. Penczek, R. K. Agrawal, I. S. Gabashvili, R. A. Grassucci, R. Jünemann, N. Burkhardt, K. H. Nierhaus, and J. Frank, J. Mol. Biol. 280, 103 (1998).
12. J. Frank, Am. Sci. 86, 428 (1998a).
13. J. Frank, J. Struct. Biol. 124, 142 (1998b).
14. R. K. Agrawal, P. Penczek, R. A. Grassucci, N. Burkhardt, K. H. Nierhaus, and J. Frank, J. Biol. Chem. 274, 8723 (1999).
15. A. Verschoor, S. Srivastava, R. Grassucci, and J. Frank, J. Cell Biol. 133, 495 (1996).
16. A. Verschoor, J. R. Warner, S. Srivastava, R. A. Grassucci, and J. Frank, Nucleic Acids Res. 26, 655 (1998).
17. R. Beckmann, D. Bubeck, R. A. Grassucci, P. Penczek, A. Verschoor, G. Blobel, and J. Frank, Science 278, 2123 (1997).
18. P. Dube, M. Wieske, H. Stark, M. Schatz, J. Stahl, F. Zemlin, G. Lutsch, and M. van Heel, Structure 6, 389 (1998).
19. N. Ban, B. Freeborn, P. Nisson, P. Penczek, R. A. Grassucci, R. Sweet, J. Frank, P. B. Moore, and T. A. Steitz, Cell 93, 1105 (1998).
20. R. K. Agrawal and D. P. Burma, J. Biol. Chem. 271, 21285 (1996).
21. U. Bommer, N. Burkhardt, R. Jünemann, C. M. T. Spahn, F. J. Triana-Alonso, and K. H. Nierhaus, in, "Subcellular Fractionation - A Practical Approach," (J. Graham and D. Richwood, eds.), pp. 271-301. IRL Press, Washington, DC, 1997.
22. G. Blaha, U. Stelzl, C. M. T. Spahn, R. K. Agrawal, J. Frank, and K. H. Nierhaus, Methods Enzymol. 317, [19], 2000 (this volume).
23. R. K. Agrawal and J. Frank, Curr. Opin. Struct. Biol. 9, 215 (1999).
24. T. Wagenknecht, R. A. Grassucci, and J. Frank, J. Mol. Biol. 199, 137 (1988).
25. J. Cyrklaff, M. Adrian, and J. Dubochet, J. Electron Microsc. Tech. 16, 351 (1990).
26. P. N. T. Unwin and R. Henderson, J. Mol. Biol. 94, 425 (1975).
27. M. Radermacher, T. Wagenknecht, A. Verschoor, and J. Frank, J. Microsc. 146, 113 (1987).
28. M. Radermacher, J. Electron Microsc. Tech. 9, 359 (1988).
29. H. Gilbert, J. Theor. Biol. 36, 105 (1972).
30. J. Zhu, P. Penczek, R. Schröder, and J. Frank, J. Struct. Biol. 118, 197 (1997).
31. M. Radermacher, T. Wagenknecht, A. Verschoor, and J. Frank, J. Microsc. 141, RP1 (1986).
32. G. Harauz and M. van Heel, Optik 73, 146 (1986).
33. M. Radermacher, in, "Electron Tomography," (J. Frank, ed.). Plenum, New York (1992).
34. M. van Heel, Ultramicroscopy 21, 111 (1987).
35. N. Farrow and F. P. Ottensmeyer, Ultramicroscopy 52, 141 (1993).
36. M. Radermacher, Ultramicroscopy 53, 121 (1994).
37. P. Penczek, J. Zhu, and J. Frank, Ultramicroscopy 63, 205 (1996).
38. T. S. Baker and R. H. Cheng, J. Struct. Biol. 116, 120 (1996).
39. M. van Heel, G. Harauz, E. V. Orlova, R. Schmidt, and M. Schatz, J. Struct. Biol. 116, 17 (1996).
40. J. Frank, A. Verschoor, and M. Boublik, Science 214, 1353 (1981).
41. J. Frank, M. Radermacher, P. Penczek, J. Zhu, Y. Li, M. Ladjadj, and A. Leith, J. Struct. Biol. 116, 190 (1996).
42. J. Frank, ed., "Three-Dimensional Electron Microscopy of Macromolecular Assemblies." Academic Press, San Diego, 1996.
43. P. D. Welsh, IEEE Trans. Audio Electroacoust. AU-15, 70 (1967).
44. J. J. Fernandez, J. R. Sanjurjo, and J. M. Carazo, Ultramicroscopy 68, 267 (1997).
45. R. K. Lata, P. Penczek, and J. Frank, Ultramicroscopy 58, 381 (1995).
46. N. Boisset, P. A. Penczek, J. Taveau, V. You, F. de Haas, and J. Lamy, Ultramicroscopy 74, 201 (1998).
47. J. Frank and P. Penczek, Optik 98, 125 (1995).
48. M. van Heel, W. Keegstra, W. Schutter, and E. F. L. van Bruggen, in "Structure and Function of Invertebrate Respiratory Proteins" (E. J. Wood, ed.), pp. 69-73. Harwood Academic, Reading, UK (1982).
49. M. van Heel, Optik 73, 83 (1986).
50. B. Böttcher, S. A. Wynne, and R. A. Crowther, Nature 386, 88 (1997).
51. S. D. Stearns and R. A. David, "Signal Processing Algorithms." Prentice-Hall, Englewood Cliffs, New Jersey, 1988.
52. T. A. Jones, J. Y. Zhou, S. W. Cowan, and M. Kjeldgaar, Acta Crystallogr. 47, 110 (1991).
53. R. Henderson, Q. Rev. Biophys. 28, 171 (1995).