Chromosome positional effects of gene expressions after cellular senescence

Biochemical and Biophysical Research Communications

Volumn 313, Issue 3, 2004, Pages 576-586

  Chen, Hung Lin ^a   Lu, Ching You ^a   Hsu, Yi Hsin ^a   Lin, Jing Jer ^a  

^a NATIONAL YANG MING UNIVERSITY   (Taiwan)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CELL ACTIVITY; CHROMOSOMAL LOCALIZATION; CHROMOSOME 4; CHROMOSOME ABERRATION; CHROMOSOME STRUCTURE; CONTROLLED STUDY; CORRELATION ANALYSIS; GENE EXPRESSION; GENE LOCATION; GENE LOCUS; GENE REPRESSION; HUMAN; HUMAN CELL; HUMAN CELL CULTURE; LUNG FIBROBLAST; POSITION EFFECT; PRIORITY JOURNAL; SENESCENCE; SKIN FIBROBLAST; TELOMERE;

EID: 0347694726     PISSN: 0006291X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbrc.2003.11.146     Document Type: Article

References (41)

1. Hayflick L., Moorhead P.S. The serial cultivation of human diploid cell strains. Exp. Cell Res. 25:1961;585-621.
2. Smith J.R., Pereira-Smith O.M. Replicative senescence: implications for in vivo aging and tumor suppression. Science. 273:1996;63-67.
3. Campisi J. Replicative senescence: an old lives' tale? Cell. 84:1996;497-500.
4. Campisi J. The biology of replicative senescence. Eur. J. Cancer. 33:1997;703-709.
5. Watson J.D. Origin of concatemeric DNA. Nature (New Biol.). 239:1972;197-201.
6. Olovnikov A.M. A theory of marginotomy. The incomplete copying of template margin in enzymatic synthesis of polynucleotides and biological significance of the phenomenon. J. Theor. Biol. 41:1973;181-190.
7. Zakian V.A. Telomeres: beginning to understand the end. Science. 270:1995;1601-1607.
8. Blackburn E.H. Telomerases. Annu. Rev. Biochem. 61:1992;113-129.
9. Blasco M.A., Lee H.-W., Hande M.P., Samper E., Lansdorp P.M., DePinho R.A., Greider C.W. Telomere shortening and tumor formation by mouse cells lacking telomerase RNA. Cell. 91:1997;25-34.
10. Waf1/Cip1/Sdi1 on cellular gene expression: implication for carcinogenesis, senescence, and age-related diseases Proc. Natl. Acad. Sci. USA. 97:2000;4291-4296.
11. Allsopp R.C., Chang E., Kashefi-Aazam M., Rogaev E.I., Piatyszek M.A., Shay J.W., Harley C.B. Telomere shortening is associated with cell division in vitro and in vivo. Exp. Cell Res. 220:1995;194-200.
12. Harley C.B. Telomere loss: mitotic clock or genetic time bomb? Mutat. Res. 256:1997;271-282.
13. Greider C.W., Blackburn E.H. Identification of a specific telomere terminal transferase activity in Tetrahymena extracts. Cell. 43:1985;405-413.
14. Romero D.P., Blackburn E.H. A conserved secondary structure for telomerase RNA. Cell. 67:1991;343-353.
15. McEachern M.J., Blackburn E.H. Runaway telomere elongation caused by telomerase RNA gene mutations. Nature. 376:1995;403-409.
16. Singer M.S., Gottschling D.E. TLC1: template RNA component of Saccharomyces cerevisiae telomerase. Science. 266:1994;404-409.
17. Feng J., Funk W.D., Wang S.-S., Weinrich S.L., Avilion A.A., Chiu C.-P., Adams R.R., Chang E., Allsopp R.C., Yu J., Le S., West M.C., Harley C.B., Andrews W.H., Greider C.W., Villeponteau B. The RNA component of human telomerase. Science. 269:1995;1236-1241.
18. Damm K., Hemmann U., Garin-Chesa P., Hauel N., Kauffmann I., Priepke H., Niestroj C., Daiber C., Enenkel B., Guilliard B., Lauritsch I., Muller E., Pascole E., Sauter G., Pantic M., Martens U.M., Wenz C., Lingner J., Kraut N., Rettig W.J., Schnapp A. A highly selective telomerase inhibitor limiting human cancer cell proliferation. EMBO J. 20:2001;6958-6968.
19. Bodnar A.G., Ouellette M., Frolkis M., Holt S.E., Chiu C.-P., Morin G.B., Harley C.B., Shay J.W., Lichtsteiner S., Wright W.E. Extension of life-span by introduction of telomerase into normal human cells. Science. 279:1998;349-352.
20. Wright J.H., Gottschling D.E., Zakian V.A. Saccharomyces telomeres assume a non-nucleosomal chromatin structure. Genes Dev. 6:1992;197-210.
21. Gottschling D.E., Aparicio O.M., Billington B.L., Zakian V.A. Position effect at S. cerevisiae telomeres: reversible repression of pol II transcription. Cell. 63:1990;751-762.
22. Baur J.A., Zou Y., Shay J.W., Wright W.E. Telomere position effect in human cells. Science. 292:2001;2075-2077.
23. Wright W.E., Shay J.W. Telomere positional effects and the regulation of cellular senescence. Trends Genet. 8:1992;193-197.
24. Villeponteau B. The heterochromatin loss model of aging. Exp. Gerontol. 32:1997;383-394.
25. Kennedy B.K., Gotta M., Sinclair D.A., Mills K., McNabb D.S., Murthy M., Pak S.M., Laroche T., Gasser S.M., Guarente L. Redistribution of silencing proteins from telomeres to the nucleolus is associated with extension of life span in S. cerevisiae. Cell. 89:1997;381-391.
26. Tissenbaum H.A., Guarente L. Increased dosage of a sir-2 gene extends lifespan in Caenorhabditis elegans. Nature. 410:2001;227-230.
27. Dimri G.P., Lee X., Basile G., Acosta M., Scott G., Roskelley C., Medrano E.E., Linskens M., Rubelj I., Pereira-Smith O., Peacocke M., Campisi J. A biomarker that identifies senescent human cells in culture and in aging skin in vivo. Proc. Natl. Acad. Sci. USA. 92:1995;9363-9367.
28. Ly D.H., Lockhart D.J., Lerner R.A., Schultz P.G. Mitotic misregulation and human aging. Science. 287:2000;2486-2492.
29. Martens U.M., Zijlmans J.M.J.M., Poon S.S.S., Dragowska W., Yui J., Chavez E.A., Ward R.K., Lansdorp P.M. Short telomeres on human chromosome 17p. Nat. Genet. 18:1998;76-80.
30. Dhawan P., Richmond A. Role of CXCL1 in tumorigenesis of melanoma. J. Leukoc. Biol. 72:2002;9-18.
31. Zhang H., Pan K.-H., Cohen S.N. Senescence-specific gene expression fingerprints reveal cell-type-dependent physical clustering of up-regulated chromosomal loci. Proc. Natl. Acad. Sci. USA. 100:2003;3251-3256.
32. Wyrick J.J., Holstege F.C.P., Jennings E.G., Causton H.C., Shore D., Grunstein M., Lander E.S., Young R.A. Chromosomal landscape of nucleosome-dependent gene expression and silencing in yeast. Nature. 402:1999;418-421.
33. Nautiyal S., DeRisi J.L., Blackburn E.H. The genome-wide expression response to telomerase deletion in Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA. 99:2002;9316-9321.
34. Sprung C.N., Sabatier L., Murnane J.P. Effect of telomere length on telomeric gene expression. Nucleic Acids Res. 24:1996;4336-4340.
35. Ning Y., Xu J., Li Y., Chavez L., Reithman H.C., Lansdorp P.M., Weng N. Telomere length and the expression of natural telomeric genes in human fibroblasts. Hum. Mol. Genet. 12:2003;1329-1336.
36. Teng S.-C., Epstein C., Tsai Y.-L., Cheng H.-W., Chen H.-L., Lin J.-J. Global response of Saccharomyces cerevisiae to cellular senescence in telomerase-minus strains. Biochem. Biophys. Res. Commun. 291:2002;714-721.
37. Shelton D.N., Chang E., Whittier P.S., Choi D., Funk W.D. Microarray analysis of replicative senescence. Curr. Biol. 9:1999;939-945.
38. West M.D., Pereira-Smith O.M., Smith J.R. Replicative senescence of human skin fibroblasts correlates with a loss of regulation and overexpression of collagenase activity. Exp. Cell Res. 184:1989;138-147.
39. Lee C.-K., Klopp R.G., Weindruch R., Prolla T.A. Gene expression profile of aging and its retardation by caloric restriction. Science. 285:1999;1390-1393.
40. Lee C.-K., Weindruch R., Prolla T.A. Gene-expression profile of the ageing brain in mice. Nat. Genet. 25:2000;294-297.
41. Murphy C.T., McCarroll S.A., Bargmann C.I., Fraser A., Kamath R.S., Ahringer J., Li H., Kenyon C. Genes that act downstream of DAF-16 to influence the lifespan of Caenorhabditis elegans. Nature. 424:2003;277-284.