Reprogramming Alternative Pre-messenger RNA Splicing through the Use of Protein-binding Antisense Oligonucleotides

Journal of Biological Chemistry

Volumn 278, Issue 50, 2003, Pages 50031-50039

  Villemaire, Jonathan ^a   Dion, Isabelle ^a   Elela, Sherif Abou ^a   Chabot, Benoit ^a  

^a UNIVERSITY OF SHERBROOKE   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEINS; RNA;

BINDING SITES;

BIOCHEMISTRY;

ANTISENSE OLIGONUCLEOTIDE; PROTEIN BCL X; SMALL NUCLEAR RIBONUCLEOPROTEIN;

ALTERNATIVE RNA SPLICING; ARTICLE; BINDING SITE; COMPLEX FORMATION; CONTROL SYSTEM; EXON; GENE MUTATION; GENETIC TRANSFECTION; HUMAN; HUMAN CELL; INTRON; MOLECULAR RECOGNITION; PRIORITY JOURNAL; PROTEIN BINDING; SEQUENCE ANALYSIS;

EUKARYOTA;

EID: 0346749521     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M308897200     Document Type: Article

References (49)

1. Modrek, B., and Lee, C. (2002) Nat. Genet. 30, 13-19
2. Blencowe, B. J. (2000) Trends Biochem. Sci. 25, 106-110
3. Black, D. L. (2003) Annu. Rev., Biochem. 72, 291-336
4. Siebel, C. W., Fresco, L. D., and Rio, D. C. (1992) Genes Dev. 6, 1386-1401
5. Kanopka, A., Mühlemann, O., and Aküsjarvi, G. (1996) Nature 381, 535-538
6. Petersen-Mahrt, S. K., Estmer, C., Ohrmalm, C., Matthews, D. A., Russell, W. C., and Aküsjarvi, G. (1999) EMBO J. 18, 1014-1024
7. Hou, V. C., Lersch, R., Gee, S. L., Ponthier, J. L., Lo, A. J., Wu, M., Turck, C. W., Koury, M., Krainer, A. R., Mayeda, A., and Conboy, J. G. (2002) EMBO J. 21, 6195-6204
8. Del Gatto-Konczak, F., Olive, M., Gesnel, M. C., and Breathnach, R. (1999) Mol. Cell. Biol. 19, 251-260
9. Caputi, M., Mayeda, A., Krainer, A. R., and Zahler, A. M. (1999) EMBO J. 18, 4060-4067
10. Bilodeau, P. S., Domsic, J. K., Mayeda, A., Krainer, A. R., and Stoltzfus, C. M. (2001) J. Virol. 75, 8487-8497
11. Tange, T. Ø., Damgaard, C. K., Guth, S., Valcárcel, J., and Kjems, J. (2001) EMBO J. 20, 5748-5758
12. Konig, H., Ponta, H., and Herrlich, P. (1998) EMBO J. 17, 2904-2913
13. Matter, N., Marx, M., Weg-Remers, S., Ponta, H., Herrlich, P., and Konig, H. (2000) J. Biol. Chem. 275, 35353-35360
14. Bai, Y., Lee, D., Yu, T., and Chasin, L. A. (1999) Nucleic Acids Res. 27, 1126-1134
15. Jiang, Z. H., Zhang, W. J., Rao, Y., and Wu, J. Y. (1998) Proc. Natl. Acad. Sci. U. S. A. 95, 9155-9160
16. Rooke, N., Markovtsov, V., Cagavi, E., and Black, D. L. (2003) Mol. Cell. Biol. 23, 1874-1884
17. Guil, S., Gattoni, R., Carrascal, M., Abian, J., Stevenin, J., and Bach-Elias, M. (2003) Mol. Cell. Biol. 23, 2927-2941
18. Carstens, R. P., Wagner, E. J., and Garcia-Blanco, M. A. (2000) Mol. Cell. Biol. 20, 7388-7400
19. Chou, M. Y., Underwood, J. G., Nikolic, J., Luu, M. H., and Black, D. L. (2000) Mol Cell 5, 949-957
20. Côté, J., Dupuis, S., and Wu, J. Y. (2001) J. Biol. Chem. 276, 8535-8543
21. Blanchette, M., and Chabot, B. (1997) RNA (N.Y.) 3, 405-419
22. Kole, R., and Sazani, P. (2001) Curr. Opin. Mol. Ther. 3, 229-234
23. Sazani, P., and Kole, R. (2003) Prog. Mol. Subcell. Biol. 31, 217-239
24. Karras, J. G., Maier, M. A., Lu, T., Watt, A., and Manoharan, M. (2001) Biochemistry 40, 7853-7859
25. Sierakowska, H., Sambade, M. J., Schumperli, D., and Kole, R. (1999) RNA (N.Y.) 5, 369-377
26. Taylor, J. K., Zhang, Q. Q., Wyatt, J. R., and Dean, N. M. (1999) Nat. Biotechnol. 17, 1097-1100
27. Patry, D., Bouchard, L., Labrecque, P., Gendron, D., Lemieux, B., Toutant, J., Lapointe, E., Wellinger, R., and Chabot, B. (2003) Cancer Res., in press
28. Blanchette, M., and Chabot, B. (1999) EMBO J. 18, 1939-1952
29. Modafferi, E. F., and Black, D. L. (1997) Mol. Cell. Biol. 17, 6537-6545
30. LaBranche, H., Dupuis, S., Ben-David, Y., Bani, M. R., Wellinger, R. J., and Chabot, B. (1998) Nat. Genet. 19, 199-202
31. Fiset, S., and Chabot, B. (2001) Nucleic Acids Res. 29, 2268-2275
32. Chabot, B. (1994) in RNA Processing, A Practical Approach (Higgins, S. J., and Hames, B. D., ed) Vol. 1, pp. 1-29, IRL Press, Oxford
33. Dignam, J. D., Lebovitz, R. M., and Roeder, R. G. (1983) Nucleic Acids Res. 11, 1475-1489
34. Chabot, B., Blanchette, M., Lapierre, I., and La Branche, H. (1997) Mol. Cell. Biol. 17, 1776-1786
35. Black, D. L., Chabot, B., and Steitz, J. A. (1985) Cell 42, 737-750
36. Schneider, D., Tuerk, C., and Gold, L. (1992) J. Mol. Biol. 228, 862-869
37. Modafferi, E. F., and Black, D. L. (1999) RNA (N. Y.) 5, 687-706
38. Burd, C. G., and Dreyfuss, G. (1994) EMBO J. 13, 1197-1204
39. Mercatante, D. R., Mohler, J. L., and Kole, R. (2002) J. Biol. Chem. 277, 49374-49382
40. Mercatante, D. R., Bortner, C. D., Cidlowski, J. A., and Kole, R. (2001) J. Biol. Chem. 276, 16411-16417
41. Mercatante, D. R., and Kole, R. (2002) Biochim. Biophys. Acta 1587, 126-132
42. Chabot, B., and Steitz, J. A. (1987) Mol. Cell. Biol. 7, 281-293
43. Kramer, A. (1987) J. Mol. Biol. 196, 559-573
44. Siebel, C. W., Kanaar, R., and Rio, D. C. (1994) Genes Dev. 8, 1713-1725
45. Damgaard, C. K., Tange, T. Ø., and Kjems, J. (2002) RNA (N. Y.) 8, 1401-1415
46. Cáceres, J. F., and Kornblihtt, A. R. (2002) Trends Genet. 18, 186-193
47. Skordis, L. A., Dunckley, M. G., Yue, B., Eperon, I. C., and Muntoni, F. (2003) Proc. Natl. Acad. Sci. U. S. A. 100, 4114-4119
48. Cartegni, L., and Krainer, A. R. (2003) Nat. Struct. Biol. 10, 120-125
49. Dallaire, F., Dupuis, S., Fiset, S., and Chabot, B. (2000) J. Biol. Chem. 275, 14509-14516