A conditional U5 snRNA mutation affecting pre-mRNA splicing and nuclear pre-mRNA retention identifies SSD1/SRK1 as a general splicing mutant suppressor

Nucleic Acids Research

Volumn 27, Issue 17, 1999, Pages 3455-3465

  Luukkonen, B G Mattias ^a,b   Séraphin, Bertrand ^a  

^a EUROPEAN MOLECULAR BIOLOGY LABORATORY   (Germany)

^b JOHNSON AND JOHNSON PHARMACEUTICAL RESEARCH AND DEVELOPMENT   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GENE PRODUCT; SMALL NUCLEAR RNA;

ARTICLE; CONTROLLED STUDY; EXON; GENE MUTATION; HEAT SENSITIVITY; NONHUMAN; PHENOTYPE; POINT MUTATION; PRIORITY JOURNAL; RNA SPLICING; SUPPRESSOR GENE; YEAST CELL;

BASE SEQUENCE; CELL NUCLEUS; FUNGAL PROTEINS; GENES, SUPPRESSOR; MOLECULAR SEQUENCE DATA; MUTATION; NUCLEIC ACID CONFORMATION; PHENOTYPE; RIBONUCLEOPROTEIN, U4-U6 SMALL NUCLEAR; RNA PRECURSORS; RNA SPLICING; RNA, SMALL NUCLEAR; SUPPRESSION, GENETIC; TEMPERATURE;

EID: 0344172814     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/27.17.3455     Document Type: Article

References (89)

1. Green, M.R. (1991) Annu. Rev. Cell Biol., 7, 559-599.
2. Guthrie, C. (1991) Science, 253, 157-163.
3. Burge, C., Tuschl, T. and Sharp, P. (1999) In Gesteland, R. and Atkins, J. (eds) The RNA World II. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, pp. 525-560.
4. Will, C. and Luhrmann, R. (1997) Curr. Opin. Cell Biol., 9, 320-328.
5. Staley, J. and Guthrie, C. (1998) Cell, 92, 315-326.
6. Zhuang, Y. and Weiner, A.M. (1986) Cell, 46, 827-835.
7. Séraphin, B., Kretzner, L. and Rosbash, M. (1988) EMBO J., 7, 2533-2538.
8. Siliciano, P.G. and Guthrie, C (1988) Genes Dev., 2, 1258-1267.
9. Kandels-Lewis, S. and Séraphin, B. (1993) Science, 262, 2035-2039.
10. Lesser, C.F. and Guthrie, C. (1993) Science, 262, 1982-1988.
11. Sontheimer, E.J. and Steitz, J.A. (1993) Science, 262, 1989-1996.
12. Luukkonen, B.G.M. and Séraphin, B. (1998) RNA, 4, 167-180.
13. Newman, A. and Norman, C. (1991) Cell, 65, 115-123.
14. Newman, A.J. and Norman, C. (1992) Cell, 68, 743-154.
15. Berglund, J., Chua, K., Abovich, N., Reed, R. and Rosbash, M. (1997) Cell, 89, 781-787.
16. Abovich, N. and Rosbash, M. (1997) Cell, 89, 403-412.
17. Arning, S., Gruter, P., Bilbe, G. and Kramer, A. (1996) RNA, 2, 794-810.
18. Abovich, N., Liao, X.C. and Rosbash, M. (1994) Genes Dev., 8, 843-854.
19. Parker, R., Siliciano, P.G. and Guthrie, C. (1987) Cell, 49, 229-239.
20. Wu, J. and Manley, J.L. (1989) Genes Dev., 3, 1553-1561.
21. Zhuang, Y. and Weiner, A.M. (1989) Genes Dev., 3, 1545-1552.
22. Query, C.C., Moore, M.J. and Sharp, P.A. (1994) Genes Dev., 8, 587-597.
23. Pascolo, E. and Séraphin, B. (1997) Mol. Cell. Biol., 17, 3469-3476.
24. Madhani, H. and Guthrie, C. (1994) Annu. Rev. Genet., 28, 1-26.
25. Newman, A. (1994) Curr. Opin. Cell Biol., 6, 360-367.
26. Nilsen, T.W. (1994) Cell, 78, 1-4.
27. Pikielny, C.W., Rymond, B.C. and Rosbash, M. (1986) Nature, 324, 341-345.
28. Cheng, S.C. and Abelson, J. (1987) Genes Dev., 1, 1014-1027.
29. Konarska, M.M. and Sharp, P.A. (1987) Cell, 49, 763-774.
30. Lamond, A.I., Konarska, M.M., Grabowski, P.J. and Sharp, P.A. (1988) Proc. Natl Acad. Sci. USA, 85, 411-415.
31. Blencowe, B.J., Sproat, B.S., Ryder, U., Barabino, S. and Lamond, A.I. (1989) Cell, 59, 531-539.
32. Yean, S. and Lin, R. (1991) Mol. Cell. Biol., 11, 5571-5577.
33. O'Keefe, R. and Newman, A. (1998) EMBO J., 17, 565-574.
34. Luhrmann, R., Kastner, B. and Bach, M. (1990) Biochim. Biophys. Acta, 1087, 265-292.
35. Hashimoto, C. and Steitz, J. (1984) Nucleic Adds Res., 12, 3283-3293.
36. Rinke, J., Appel, B., Digweed, M. and Luhrmann, R. (1985) J. Mol. Biol., 185, 721-731.
37. Brow, D.A. and Guthrie, C. (1988) Nature, 334, 213-218.
38. Bindereif, A., Wolff, T. and Green, M.R. (1990) EMBO J., 9, 251-255.
39. Vankan, P., McGuigan, C. and Mattaj, I.W. (1990) EMBO J., 9, 3397-3404.
40. Fabrizio, P. and Abelson, J. (1990) Science, 250, 404-409.
41. Yu, Y.T., Maroney, P.A. and Nilsen, T.W. (1993) Cell, 75, 1049-1059.
42. Luukkonen, B.G.M. and Séraphin, B. (1998) RNA, 4, 915-927.
43. Cooper, M., Johnston, L.H. and Beggs, J.D. (1995) EMBO J., 14, 2066-2075.
44. Séraphin, B. (1995) EMBO J., 14, 2089-2098.
45. Fetzer, S., Lauber, J., Will, C. and Luhrmann, R. (1997) RNA, 3, 344-355.
46. Teigelkamp, S., Mundt, C., Achsel, T., Will, C. and Luhrmann, R. (1997) RNA, 3, 1313-1326.
47. Horowitz, D., Kobayashi, R. and Krainer, A. (1997) RNA, 3, 1374-1387.
48. Sikorski, R. and Hieter, P. (1989) Genetics, 122, 19-27.
49. Seraphin, B. and Kandels-Lewis, S. (1996) Nucleic Acids Res., 24, 3276-3277.
50. Puig, O., Rutz, B., Luukkonen, B.G.M., Kandels-Lewis, S., Bragado-Nilsson, E. and Séraphin, B. (1998) Yeast, 14, 1139-1146.
51. Ito, H., Fukada, Y., Murata, K. and Kimura, A. (1983) J. Bacteriol., 153, 163-168.
52. Pikielny, C.W. and Rosbash, M. (1985) Cell, 41, 119-126.
53. Luukkonen, B.G.M. and Séraphin, B. (1997) EMBO J., 16, 779-792.
54. Séraphin, B. and Kandels-Lewis, S. (1993) Cell, 73, 803-812.
55. Puig, O.M., Gottschalk, A., Fabrizio, P. and Séraphin, B. (1999) Genes Dev., 13, 569-580.
56. Luukkonen, B.G.M. and Séraphin, B. (1998) RNA, 4, 231-238.
57. Newman, A. (1997) EMBO J., 16, 5797-5800.
58. Stutz, F., Liao, X. and Rosbash, M. (1993) Mol. Cell. Biol., 13, 2126-2133.
59. O'Keefe, R., Norman, C. and Newman, A. (1996) Cell, 86, 679-689.
60. Galisson, F. and Legrain, P. (1993) Nucleic Acids Res., 24, 1037-1044.
61. Legrain, P. and Rosbash, M. (1989) Cell, 57, 573-583.
62. Sutton, A, Immanuel, D. and Arndt, K. (1991) Mol. Cell. Biol., 11, 2133-2148.
63. Frank, D., Patterson, B. and Guthrie, C. (1992) Mol. Cell. Biol., 12, 5197-5205.
64. Vijayraghavan, U. and Abelson, J. (1990) Mol. Cell. Biol., 10, 324-332.
65. Abovich, N., Legrain, P. and Rosbash, M. (1990) Mol. Cell. Biol., 10, 6417-6425.
66. Wells, S.E. and Ares, M., Jr (1994) Mol. Cell. Biol., 14, 6337-6349.
67. Ruby, S.W., Chang, T.H. and Abelson, J. (1993) Genes Dev., 7, 1909-1925.
68. Rain, J., Tartakoff, A., Kramer, A. and Legrain, P. (1996) RNA, 2, 535-550.
69. Rain, J. and Legrain, P. (1997) EMBO J., 16, 1759-1771.
70. Wilson, R., Brenner, A., White, T., Engler, M., Gaughran, J. and Tatchell, K. (1991) Mol. Cell. Biol., 11, 3369-3373.
71. Cvrckova, F. and Nasmyth, K. (1993) EMBO J., 12, 5277-5286.
72. Nasmyth, K. and Dirick, L. (1991) Cell, 66, 995-1013.
73. Costigan, C., Gehrung, S. and Snyder, M. (1992) Mol. Cell. Biol., 12, 1162-1178.
74. Lee, K., Irie, K., Gotoh, Y., Watanabe, Y., Araki, H., Nishida, E., Matsumoto, K. and Levin, D. (1993) Mol. Cell. Biol., 13, 3067-3075.
75. Uesono, Y., Toh-e, A. and Kikuchi, Y. (1997) J. Biol. Chem., 272, 16103-16109.
76. Ast, G. and Weiner, A. (1996) Science, 272, 881-884.
77. Colot, H., Stutz, F. and Rosbash, M. (1996) Genes Dev., 10, 1699-1708.
78. Lewis, J., Gorlich, D. and Mattaj, I. (1996) Nucleic Acids Res., 24, 3332-3336.
79. Lewis, J., Izaurralde, E., Jarmolowski, A., McGuigan, C. and Mattaj, I. (1996) Genes Dev., 10, 1683-1698.
80. Mermoud, J.E., Cohen, P. and Lamond, A.I. (1992) Nucleic Acids Res., 20, 5263-5269.
81. Johnston, L. and Thomas, A. (1982) Mol. Gen. Genet., 186, 445-448.
82. Johnston, L. and Thomas, A. (1982) Mol. Gen. Genet., 186, 439-444.
83. Shea, J., Toyn, J. and Johnston, L. (1994) Nucleic Acids Res., 22, 5555-5564.
84. Vijayraghavan, U., Company, M. and Abelson, J. (1989) Genes Dev., 3, 1206-1216.
85. Ben Yehuda, S., Dix, I., Russell, C., Levy, S., Beggs, J. and Kupiec, M. (1998) RNA, 4, 1304-1312.
86. Vaisman, N., Tzoulade, A., Robzyk, K., Ben-Yehuda, S., Kupiec, M. and Kassir, Y. (1995) Mol. Gen. Genet., 247, 123-136.
87. Seghezzi, W., Chua, K., Shanahan, F., Gozani, O., Reed, R. and Lees, E. (1998) Mol. Cell. Biol., 18, 4526-4536.
88. Wang, C., Chua, K., Seghezzi, W., Lees, E., Gorzani, O. and Reed, R. (1998) Genes Dev., 12, 1409-1414.
89. Frank, D.N., Roiha, H. and Guthrie, C. (1994) Mol. Cell. Biol., 14, 2180-2190.