Preferential Binding of the Histone (H3-H4)2 Tetramer by NAP1 Is Mediated by the Amino-terminal Histone Tails

Journal of Biological Chemistry

Volumn 278, Issue 45, 2003, Pages 44574-44583

  McBryant, Steven J ^b   Park, Young Jun ^b   Abernathy, Stephanie M ^b   Laybourn, Paul J ^b   Nyborg, Jennifer K ^b   Luger, Karolin ^a  

^a Department of Environmental and Radiological Health Sciences   (United States)

^b NONE

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; CELLS; CHEMICAL ACTIVATION; ELECTROSTATICS; HYDROLYSIS; SYNTHESIS (CHEMICAL); YEAST;

NUCLEOSOME;

PROTEINS;

CHAPERONE; DIMER; HISTONE H2A; HISTONE H2B; HISTONE H3; HISTONE H4; NUCLEOSOME ASSEMBLY PROTEIN 1; PROTEIN; RECOMBINANT PROTEIN; TETRAMER; UNCLASSIFIED DRUG;

ACIDITY; AMINO TERMINAL SEQUENCE; ARTICLE; CARBOXY TERMINAL SEQUENCE; CHROMATIN; CIRCULAR DICHROISM; COMPLEX FORMATION; CONTROLLED STUDY; DNA BINDING; DNA SYNTHESIS; GEL MOBILITY SHIFT ASSAY; IN VITRO STUDY; MOLECULAR INTERACTION; NONHUMAN; NUCLEOSOME; PRIORITY JOURNAL; PROTEIN ASSEMBLY; PROTEIN DOMAIN; PROTEIN FOLDING; PROTEIN FUNCTION; PROTEIN INTERACTION; PROTEIN STRUCTURE; STOICHIOMETRY; TRANSCRIPTION INITIATION;

ANIMALS; BINDING SITES; CELL CYCLE PROTEINS; CHEMISTRY, PHYSICAL; CHROMATOGRAPHY, GEL; DIMERIZATION; DROSOPHILA; ELECTROPHORESIS, POLYACRYLAMIDE GEL; ELECTROSTATICS; GENE DELETION; GLUTATHIONE TRANSFERASE; HISTONES; MODELS, MOLECULAR; MUTAGENESIS; NUCLEAR PROTEINS; PEPTIDE FRAGMENTS; POLYMERASE CHAIN REACTION; PROTEIN FOLDING; PROTEINS; RECOMBINANT FUSION PROTEINS; SACCHAROMYCES CEREVISIAE; STRUCTURE-ACTIVITY RELATIONSHIP; XENOPUS LAEVIS;

EID: 0242497812     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M305636200     Document Type: Article

References (63)

1. Luger, K., Mader, A. W., Richmond, R. K., Sargent, D. F., and Richmond, T. J. (1997) Nature 389, 251-260
2. Eickbush, T. H., and Moudrianakis, E. N. (1978) Biochemistry 17, 4955-4964
3. Arents, G., and Moudrianakis, E. N. (1995) Proc. Natl. Acad. Sci. U. S. A. 92, 11170-11174
4. Luger, K., and Richmond, T. J. (1998) Curr. Opin. Genet. Dev. 8, 140-146
5. Luger, K., and Richmond, T. J. (1998) Curr. Opin. Struct. Biol. 8, 33-40
6. Smith, R. M., and Rill, R. L. (1989) J. Biol. Chem. 264, 10574-10581
7. Arents, G., Burlingame, R. W., Wang, B. C., Love, W. E., and Moudrianakis, E. N. (1991) Proc. Natl. Acad. Sci. U. S. A, 88, 10148-10152
8. Richmond, T. J., Finch, J. T., Rushton, B., Rhodes, D., and Klug, A. (1984) Nature 311, 532-537
9. Davey, C. A., Sargent, D. F., Luger, K., Maeder, A. W., and Richmond, T. J. (2002) J. Mol. Biol. 319, 1097-1113
10. Luger, K., Rechsteiner, T. J., Flaus, A. J., Waye, M. M., and Richmond, T. J. (1997) J. Mol. Biol. 272, 301-311
11. Ausio, J., Dong, F., and van Holde, K. E. (1989) J. Mol. Biol. 206, 451-463
12. Widlund, H. R., Vitolo, J. M., Thiriet, C., and Hayes, J. J. (2000) Biochemistry 39, 3835-3841
13. Zheng, C., and Hayes, J. J. (2003) Biopolymers 68, 539-546
14. Carruthers, L. M., and Hansen, J. C. (2000) J. Biol. Chem. 275, 37285-37290
15. Dorigo, B., Schalch, T., Bystricky, K., and Richmond, T. J. (2003) J. Mol. Biol. 327, 85-96
16. Iizuka, M., and Smith, M. M. (2003) Curr. Opin. Genet. Dev. 13, 154-160
17. Jenuwein, T., and Allis, C. D. (2001) Science 293, 1074-1080
18. Strahl, B. D., and Allis, C. D. (2000) Nature 403, 41-45
19. Ito, T., Tyler, J. K., and Kadonaga, J. T. (1997) Genes Cells 2, 593-600
20. Philpott, A., Krude, T., and Laskey, R. A. (2000) Semin. Cell Dev. Biol. 11, 7-14
21. Verreault, A., Kaufinan, P. D., Kobayashi, R., and Stillman, B. (1996) Cell 87, 95-104
22. Krude, T., and Keller, C. (2001) Cell Mol. Life Sci. 58, 665-672
23. Tyler, J. K. (2002) Eur. J. Biochem. 269, 2268-2274
24. Tyler, J. K., Adams, C. R., Chen, S. R., Kobayashi, R., Kamakaka, R. T., and Kadonaga, J. T. (1999) Nature 402, 555-560
25. Akey, C. W., and Luger, K. (2003) Curr. Opin. Struct. Biol. 13, 6-14
26. Ishimi, Y., Hirosumi, J., Sato, W., Sugasawa, K., Yokota, S., Hanaoka, F., and Yamada, M. (1984) Eur. J. Biochem. 142, 431-439
27. Yoon, H. W., Kim, M. C., Lee, S. Y., Hwang, I., Bahk, J. D., Hong, J. C., Ishimi, Y., and Cho, M. J. (1995) Mol. Gen. Genet. 249, 465-473
28. Ishimi, Y., and Kikuchi, A. (1991) J. Biol. Chem. 266, 7025-7029
29. Nishiyama, N., Sawatsubashi, S., Ishida, M., and Yamauchi, K. (2001) Gene (Amst.) 280, 107-114
30. Ito, T., Bulger, M., Kobayashi, R., and Kadonaga, J. T. (1996) Mol. Cell. Biol. 16, 3112-3124
31. Chang, L., Loranger, S. S., Mizzen, C., Ernst, S. G., Allis, C. D., and Annunziato, A. T. (1997) Biochemistry 36, 469-480
32. Ishimi, Y., Kojima, M., Yamada, M., and Hanaoka, F. (1987) Eur. J. Biochem. 162, 19-24
33. McQuibban, G. A., Commisso-Cappelli, C. N., and Lewis, P. N. (1998) J. Biol. Chem. 273, 6582-6590
34. Nakagawa, T., Bulger, M., Muramatsu, M., and Ito, T. (2001) J. Biol. Chem. 276, 27384-27391
35. Thiriet, C., and Hayes, J. J. (2001) Genes Dev. 15, 2048-2053
36. Ito, T., Ikehara, T., Nakagawa, T., Kraus, W. L., and Muramatsu, M. (2000) Genes Dev. 14, 1899-1907
37. Walter, P. P., Owen-Hughes, T. A., Cote, J., and Workman, J. L. (1995) Mol. Cell. Biol. 15, 6178-6187
38. Shikama, N., Chan, H. M., Krstic-Demonacos, M., Smith, L., Lee, C. W., Cairns, W., and La Thangue, N. B. (2000) Mol. Cell. Biol. 20, 8933-8943
39. Asahara, H., Tartare-Deckert, S., Nakagawa, T., Ikehara, T., Hirose, F., Hunter, T., Ito, T., and Montminy, M. (2002) Mol. Cell. Biol. 22, 2974-2983
40. Rodriguez, P., Pelletier, J., Price, G. B., and Zannis-Hadjopoulos, M. (2000) J. Mol. Biol. 298, 225-238
41. Zimmerman, Z. A., and Kellogg, D. R. (2001) Mol. Biol. Cell 12, 201-219
42. Altman, R., and Kellogg, D. (1997) J. Cell Biol. 138, 119-130
43. Fujii-Nakata, T., Ishimi, Y., Okuda, A., and Kikuchi, A. (1992) J. Biol. Chem. 267, 20980-20986
44. Georges, S. A., Kraus, W. L., Luger, K., Nyborg, J. K., and Laybourn, P. J. (2002) Mol. Cell. Biol. 22, 127-137
45. An, W., Palhan, V. B., Karymov, M. A., Leuba, S. H., and Roeder, R. G. (2002) Mol. Cell 9, 811-821
46. Hecht, A., Laroche, T., Strahl-Bolsinger, S., Gasser, S. M., and Grunstein, M. (1995) Cell 80, 583-592
47. Luger, K., Rechsteiner, T. J., and Richmond, T. J. (1999) Methods Mol. Biol. 119, 1-16
48. White, C. L., Suto, R. K., and Luger, K. (2001) EMBO J. 20, 5207-5218
49. Dyer, P. N., Edayathumangalam, R. S., White, C. L., Bao, Y., Chakravarthy, S., Muthurajan, U. M., and Luger, K. (2003) Methods Enzymol., in press
50. Pilon, J., Terrell, A., and Laybourn, P. J. (1997) Protein Expr. Purif. 10, 132-140
51. Pazin, M. J., Kamakaka, R. T., and Kadonaga, J. T. (1994) Science 266, 2007-2011
52. Bohm, L., and Crane-Robinson, C. (1984) Biosci. Rep. 4, 365-386
53. Croston, G. E., Lira, L. M., and Kadonaga, J. T. (1991) Protein Expression Purif. 2, 162-169
54. Chen, Y. H., Yang, J. T., and Martinez, H. M. (1972) Biochemistry 11, 4120-4131
55. Gavin, A. C., Bosche, M., Krause, R., Grandi, P., Marzioch, M., Bauer, A., Schultz, J., Rick, J. M., Michon, A. M., Cruciat, C. M., Remor, M., Hofert, C., Schelder, M., Brajenovic, M., Ruffner, H., Merino, A., Klein, K., Hudak, M., Dickson, D., Rudi, T., Gnau, V., Bauch, A., Bastuck, S., Huhse, B., Leutwein, C., Heurtier, M. A., Copley, R. R., Edelmann, A., Querfurth, E., Rybin, V., Drewes, G., Raida, M., Bouwmeester, T., Bork, P., Seraphin, B., Kuster, B., Neubauer, G., and Superti-Furga, G. (2002) Nature 415, 141-147
56. Earnshaw, W. C., Honda, B. M., Laskey, R. A., and Thomas, J. O. (1980) Cell 21, 373-383
57. Dutta, S., Akey, I. V., Dingwall, C., Hartman, K. L., Laue, T., Nolte, R. T., Head, J. F., and Akey, C. W. (2001) Mol. Cell 8, 841-853
58. Namboodiri, V. M., Dutta, S., Akey, I. V., Head, J. F., and Akey, C. W. (2003) Structure 11, 175-186
59. Sobel, R. E., Cook, R. G., Perry, C. A., Annunziato, A. T., and Allis, C. D. (1995) Proc. Natl. Acad. Sci. U. S. A. 92, 1237-1241
60. Baer, B. W., and Rhodes, D. (1983) Nature 301, 482-488
61. Terrell, A. R., Wongwisansri, S., Pilon, J. L., and Laybourn, P. J. (2002) J. Biol. Chem. 277, 31038-31047
62. Kimura, H., and Cook, P. R. (2001) J. Cell Biol. 153, 1341-1353
63. Kireeva, M. L., Walter, W., Tchernajenko, V., Bondarenko, V., Kashlev, M., and Studitsky, V. M. (2002) Mol. Cell 9, 541-552