Kinetics of proton transfer in a green fluorescent protein: A laser-induced pH jump study

Proceedings of the Indian Academy of Sciences: Chemical Sciences

Volumn 115, Issue 4, 2003, Pages 307-317

  Mallik, Roop ^a,c   Udgaonkar, Jayant B ^a   Krishnamoorthy, G ^b  

^a TATA INSTITUTE OF FUNDAMENTAL RESEARCH   (India)

^b TATA INSTITUTE OF FUNDAMENTAL RESEARCH   (India)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Caged proton; Green fluorescent protein; PH jump; Protein dynamics; Proton transfer

Indexed keywords

FLUORESCENCE; LASER APPLICATIONS; PH EFFECTS; PHOTONS; PROTONS; REACTION KINETICS; SOLVENTS; TIME DOMAIN ANALYSIS; VISCOSITY OF LIQUIDS; CHARGE TRANSFER;

GREEN FLUORESCENT PROTEIN; NITROBENZALDEHYDE;

CHROMOPHORES; PROTEINS;

CAGED PROTON; GREEN FLUORESCENT PROTEIN; PH-JUMP; PROTEIN DYNAMICS; PROTON TRANSFER;

EID: 0141749216     PISSN: 02534134     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF02704222     Document Type: Article

References (38)

1. Fenimore P W, Fraenfelder H, McMahon B H and Parak F G 2002 Proc. Natl. Acad. Sci. (USA) 99 16047
2. Kay L E 1998 Nature Struct. Biol. (NMR Suppl.) 5 513
3. Stock A 1999 Nature (London) 400 221
4. Feher V A and Cavanagh J 1999 Nature (London) 400 289
5. Nicholson L K, Yamazaki T, Torchia D A, Grzesiek S, Bax A, Stahl S J, Kaufman J D, Wingfield P T, Lam P Y and Jadhav P K 1995 Nature Struct. Biol. 2 274
6. Lee A L, Kinnear S A and Wand A J 2000 Nature Struct. Biol. 7 72
7. Luecke H, Schobert B, Richter H T, Cartailler J P and Lanyi J K 1999 Science 286 255
8. Subramaniam S and Henderson 2000 Nature (London) 406 653
9. Abrahams J P, Leslie A G, Lutte R and Walker J E 1994 Nature (London) 370 621
10. Iwata S, Ostermier C, Ludwig B and Michel H 1995 Nature (London) 376 660
11. Tsukihara T, Aoyama H, Yamashita E, Tomizaki T, Yamaguchi H, Shinzawa-Itoh, Nakashima R, Yaono R and Yoshikawa S 1996 Science 272 1136
12. Cavanagh J and Akke M 2000 Nature Struct. Biol. 7 11
13. Wand J A 2001 Nature Struct. Biol. 8 926
14. Shimomura O, Johnson F H and Saiga Y 1962 J. Cell. Comp. Physiol. 59 223
15. Tsien R Y 1998 Annu. Rev. Biochem. 67 509
16. Ormo M, Cubitt A B, Kallio K, Gross L A, Tsien R Y and Remington S J 1996 Science 273 1392
17. Yang F, Moss L G and Phillips G N Jr 1996 Nature Biotechnol. 14 1246
18. Heim R, Prasher D C and Tsien R Y 1994 Proc. Natl. Acad. Sci. (USA) 91 12501
19. Brejc K, Sixma T K, Kitts P A, Kain S R, Tsien R Y, Ormo M and Remington S J 1997 Proc. Natl. Acad. Sci. (USA) 94 2306
20. Elsliger M, Wachter R M, Hanson G T, Kallio K and Remington S J 1999 Biochemistry 38 5296
21. Haupts U, Maiti S, Schwille P and Webb W W 1998 Proc. Natl. Acad. Sci. (USA) 95 13573
22. Kneen M, Farinas J, Li Y and Verkman A S 1998 Biophys. J. 74 1591
23. Viappiani C, Bonettu G, Caercelli M, Ferrari F and Sternieri A 1998 Rev. Sci. Instrum. 69 270
24. Abbruzzetti S, Crema E, Masino L, Veeli A, Viappiani C, Small J R, Libertini L J and Small E W 2000 Biophys. J. 78 405
25. Barth A and Corriedaggo J E T 2002 Biophys. J. 83 2864
26. Chattoraj M, King B A, Bublitz G U and Boxer S G 1996 Proc. Natl. Acad. Sci. (USA) 93 8362
27. Swaminathan R, Hoang C P and Verkman A S 1997 Biophys. J. 72 1900
28. Gutman M and Nachliel E 1990 Biochim. Biophys. Acta 1015 391
29. George M V and Scaiano J C 1980 J. Phys. Chem. 84 492
30. Chen K, Hirst J, Camba R, Bonagura C A, Stout C D, Burgess B K and Armstrong F A 2000 Nature (London) 405 814
31. Lill M A and Helms V 2002 Proc. Natl. Acad. Sci. (USA) 99 2778
32. Pomes R and Roux B 1996 J. Phys. Chem. 100 2519
33. Brewer M L, Schmitt U W and Voth G A 2001 Biophys. J. 80 1691
34. Gavish B and Yedgar S 1995 Protein-solvent interactions (ed.) R B Gregory (New York: Marcel Dekker) p. 343
35. Gregory R G, Rosenberg A, Knox D and Percy A J 1990 Biopolymers 29 1175
36. Ansari A, Lones C M, Henry E R, Hofrichter J and Eaton W A 1992 Science 256 1796
37. Kramers H A 1940 Physica (Utrecht) 7 284
38. Hanggi P, Talkner P and Borkovec M 1990 Rev. Mod. Phys. 62 251