-
3
-
-
0030007094
-
Large-scale search for genes on which positive selection may operate
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 685-690
-
-
Endo, T.1
-
5
-
-
0019134329
-
Molecular evolution of mRNA: A method for estimating evolutionary rates of synonymous and amino acid substitutions from homologous nucleotide sequences and its applications
-
(1980)
J. Mol. Evol.
, vol.16
, pp. 23-36
-
-
Miyata, T.1
Yasunaga, T.2
-
6
-
-
0028797897
-
Inferring weak selection from patterns of polymorphism and divergence at 'silent' sites in Drosophila DNA
-
(1995)
Genetics
, vol.139
, pp. 1067-1076
-
-
Akashi, H.1
-
10
-
-
0022005270
-
A new method for estimating synonymous and nonsynonymous rates of nucleotide substitutions considering the relative likelihood of nucleotide and codon changes
-
(1985)
Mol. Biol. Evol.
, vol.2
, pp. 150-174
-
-
Li, W.-H.1
-
11
-
-
0027403961
-
Unbiased estimation of the rates of synonymous and nonsynonymous substitution
-
(1993)
J. Mol. Evol.
, vol.36
, pp. 96-99
-
-
Li, W.-H.1
-
13
-
-
0029563023
-
A method for estimating the numbers of synonymous and nonsynonymous substitutions per site
-
(1995)
J. Mol. Evol.
, vol.41
, pp. 1152-1159
-
-
Comeron, J.M.1
-
14
-
-
0028906291
-
New methods for estimating the numbers of synonymous and nonsynonymous substitutions
-
(1995)
J. Mol. Evol.
, vol.40
, pp. 190-226
-
-
Ina, Y.1
-
20
-
-
85031537677
-
Adaptive molecular evolution
-
Handbook of Statistical Genetics (Balding, D. et al., eds), Ch. 12, Wiley
-
(2000)
-
-
Yang, Z.1
-
21
-
-
85031540206
-
Rates of nucleotide substitution and mammalian nuclear gene evolution: Approximate and maximum-likelihood methods lead to different conclusions
-
in press
-
Genetics
-
-
Bielawski, J.1
-
24
-
-
0028820333
-
A new method of inference of ancestral nucleotide and amino acid sequences
-
(1995)
Genetics
, vol.141
, pp. 1641-1650
-
-
Yang, Z.1
-
27
-
-
0031897964
-
Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 568-573
-
-
Yang, Z.1
-
29
-
-
0031729188
-
Preponderance of slightly deleterious polymorphism in mitochondrial DNA: Replacement/synonymous rate ratio is much higher within species than between species
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 1499-1505
-
-
Hasegawa, M.1
-
30
-
-
0015722319
-
Slightly deleterious mutant substitutions in evolution
-
(1973)
Nature
, vol.246
, pp. 96-98
-
-
Ohta, T.1
-
34
-
-
0032736987
-
Positive selection on the H3 hemagglutinin gene of human influenza virus A
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 1457-1465
-
-
Bush, R.M.1
-
36
-
-
0031972161
-
Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene
-
(1998)
Genetics
, vol.148
, pp. 929-936
-
-
Nielsen, R.1
Yang, Z.2
-
37
-
-
0034097381
-
Codon-substitution models for heterogeneous selection pressure at amino acid sites
-
(2000)
Genetics
, vol.155
, pp. 431-449
-
-
Yang, Z.1
-
38
-
-
0032737463
-
Genealogical evidence for positive selection in the nef gene of HIV-1
-
(1999)
Genetics
, vol.153
, pp. 1077-1089
-
-
Zanotto, P.M.1
-
39
-
-
0033800170
-
Maximum likelihood analysis of molecular adaptation in abalone sperm lysin reveals variable selective pressures among lineages and sites
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 1446-1455
-
-
Yang, Z.1
-
40
-
-
0033995286
-
Reevaluation of amino acid variability of the human immunodeficiency virus type 1 gp120 envelope glycoprotein and prediction of new discontinuous epitopes
-
(2000)
J. Virol.
, vol.74
, pp. 4335-4350
-
-
Yamaguchi-Kabata, Y.1
Gojobori, T.2
-
42
-
-
85031554036
-
Evidence for positive selection in foot-and-mouth-disease virus capsid genes from field isolates
-
in press
-
Genetics
-
-
Haydon, D.T.1
-
43
-
-
0031792828
-
Models of amino acid substitution and applications to mitochondrial protein evolution
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 1600-1611
-
-
Yang, Z.1
-
44
-
-
0033921902
-
Rates of conservative and radical nonsynonymous nucleotide substitutions in mammalian nuclear genes
-
(2000)
J. Mol. Evol.
, vol.50
, pp. 56-68
-
-
Zhang, J.1
-
49
-
-
0023764283
-
Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection
-
(1988)
Nature
, vol.335
, pp. 167-170
-
-
Hughes, A.L.1
Nei, M.2
-
50
-
-
0033747356
-
Identification of target amino acids that affect interactions of fungal polygalacturonases and their plant inhibitors
-
(2000)
Mol. Physiol. Plant Path.
, vol.56
, pp. 117-130
-
-
Stotz, H.U.1
-
53
-
-
0033150393
-
Natural selection promotes divergence of transferrin among salmonid species
-
(1999)
Mol. Ecol.
, vol.8
, pp. 1055-1061
-
-
Ford, M.J.1
-
57
-
-
0032755757
-
Recombination of hepatitis D virus RNA sequences and its implications
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 1622-1632
-
-
Wu, J.C.1
-
58
-
-
0026549203
-
Positive selection and interallelic recombination at the merozoite surface antigen-1 (MSA-1) locus of Plasmodium falciparum
-
(1992)
Mol. Biol. Evol.
, vol.9
, pp. 381-393
-
-
Hughes, A.L.1
-
59
-
-
0028906959
-
Sequence evolution of the porB gene of Neisseria gonorrhoeae and Neisseria meningitidis: Evidence for positive darwinian selection
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 363-370
-
-
Smith, N.H.1
-
60
-
-
0031041457
-
Episodic evolution mediates interspecific transfer of a murine coronavirus
-
(1997)
J. Virol.
, vol.71
, pp. 1946-1955
-
-
Baric, R.S.1
-
61
-
-
0031037939
-
Positive darwinian selection on two homologous fertilization proteins: What is the selective pressure driving their divergence
-
(1997)
J. Mol. Evol.
, vol.44
, pp. 15-22
-
-
Vacquier, V.D.1
-
63
-
-
0032819218
-
Reduced nucleotide variability at an androgen-binding protein locus (Abpa) in house mice: Evidence for positive natural selection
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 1192-1197
-
-
Karn, R.C.1
Nachman, M.W.2
-
65
-
-
0032553369
-
A rapidly evolving homeobox at the site of a hybrid sterility gene
-
(1998)
Science
, vol.282
, pp. 1501-1504
-
-
Ting, C.T.1
-
68
-
-
0032437156
-
Identification of regions in which positive selection may operate in S-RNase of Rosaceae: Implications for S-allele-specific recognition sites in S-RNase
-
(1998)
FEBS Lett.
, vol.440
, pp. 337-342
-
-
Ishimizu, T.1
-
70
-
-
0030844231
-
Nucleotide sequence evolution at the k-casein locus: Evidence for positive selection within the family Bovidae
-
(1997)
Genetics
, vol.147
, pp. 1863-1872
-
-
Ward, T.J.1
-
74
-
-
0030915138
-
Molecular evolution of cytochrome c oxidase subunit IV: Evidence for positive selection in simian primates
-
(1997)
J. Mol. Evol.
, vol.44
, pp. 477-491
-
-
Wu, W.1
-
75
-
-
0030060230
-
Evolution of hemopoietic ligands and their receptors: Influence of positive selection on correlated replacements throughout ligand and receptor proteins
-
(1996)
J. Immunol.
, vol.156
, pp. 1062-1070
-
-
Shields, D.C.1
-
76
-
-
0029778890
-
The molecular evolution of vertebrate growth hormones: A pattern of near-stasis interrupted by sustained bursts of rapid changes
-
(1996)
J. Mol. Evol.
, vol.43
, pp. 93-100
-
-
Wallis, M.1
-
78
-
-
0027905006
-
Natural selection and the origin of jingwei, a chimeric processed functional gene in Drosophila
-
(1993)
Science
, vol.260
, pp. 91-95
-
-
Long, M.1
Langley, C.H.2
-
79
-
-
0028024626
-
A likelihood approach for comparing synonymous and nonsynonymous nucleotide substitution rates, with application to the chloroplast genome
-
(1994)
Mol. Biol. Evol.
, vol.11
, pp. 715-724
-
-
Muse, S.V.1
Gaut, B.S.2
|