-
1
-
-
0036733640
-
Computational prediction of eukaryotic protein-coding genes
-
Zhang,M.Q. (2002) Computational prediction of eukaryotic protein-coding genes. Nature Rev. Genet., 3, 698-710.
-
(2002)
Nature Rev. Genet.
, vol.3
, pp. 698-710
-
-
Zhang, M.Q.1
-
2
-
-
0031586003
-
Prediction of complete gene structures in human genomic DNA
-
Burge,C. and Karlin,S. (1997) Prediction of complete gene structures in human genomic DNA. J. Mol. Biol., 268, 78-94.
-
(1997)
J. Mol. Biol.
, vol.268
, pp. 78-94
-
-
Burge, C.1
Karlin, S.2
-
3
-
-
0035002807
-
Evaluation of gene-finding programs on mammalian sequences
-
Rogic,S., Macworth,A.K. and Ouellette,F.B. (2001) Evaluation of gene-finding programs on mammalian sequences. Genome Res., 11, 817-832.
-
(2001)
Genome Res.
, vol.11
, pp. 817-832
-
-
Rogic, S.1
Macworth, A.K.2
Ouellette, F.B.3
-
4
-
-
0037417884
-
Comparison of mouse and human genomes followed by experimental verification yields an estimated 1019 additional genes
-
Guigo,R., Dermitzakis,E.T., Agarwal,P., Ponting,C.P., Parra,G., Reymond,A., Abril,J.F., Keibler,E., Lyle,R., Ucla,C. et al. (2003) Comparison of mouse and human genomes followed by experimental verification yields an estimated 1019 additional genes. Proc. Natl Acad. Sci. USA, 100, 1140-1145.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 1140-1145
-
-
Guigo, R.1
Dermitzakis, E.T.2
Agarwal, P.3
Ponting, C.P.4
Parra, G.5
Reymond, A.6
Abril, J.F.7
Keibler, E.8
Lyle, R.9
Ucla, C.10
-
5
-
-
0033979433
-
Estimating synonymous and non-synonymous substitution rates under realistic evolutionary models
-
Yang,Z. and Nielsen,R. (2000) Estimating synonymous and non-synonymous substitution rates under realistic evolutionary models. Mol. Biol. Evol., 17, 32-43.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 32-43
-
-
Yang, Z.1
Nielsen, R.2
-
7
-
-
0036144777
-
The K(A)/K(S) ratio test for assessing the protein-coding potential of genomic regions: An empirical and simulation study
-
Nekrutenko,A., Makova,K.D. and Li,W.-H. (2002) The K(A)/K(S) ratio test for assessing the protein-coding potential of genomic regions: an empirical and simulation study. Genome Res., 12, 198-202.
-
(2002)
Genome Res.
, vol.12
, pp. 198-202
-
-
Nekrutenko, A.1
Makova, K.D.2
Li, W.-H.3
-
8
-
-
0025183708
-
Basic local alignment search tool
-
Altschul,S.F., Gish,W., Miller,W., Myers,E.W. and Lipman,D.J. (1990) Basic local alignment search tool. J. Mol. Biol., 215, 403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
9
-
-
0027968068
-
ClustalW: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting position-specific gap penalties and weight matrix choice
-
Thompson,J.D., Higgins,D.G. and Gibbson,T.J. (1994) ClustalW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting position-specific gap penalties and weight matrix choice. Nucleic Acids Res., 22, 4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibbson, T.J.3
-
10
-
-
0030683599
-
PAML: A program package for phylogenetic analysis by maximum likelihood
-
Yang,Z. (1997) PAML: a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci., 13, 555-556.
-
(1997)
Comput. Appl. Biosci.
, vol.13
, pp. 555-556
-
-
Yang, Z.1
-
11
-
-
0034053725
-
A greedy algorithm for aligning DNA sequences
-
Zhang,Z., Schwartz,S., Wagner,L. and Miller,W. (2000) A greedy algorithm for aligning DNA sequences. J. Comput. Biol., 7, 203-214.
-
(2000)
J. Comput. Biol.
, vol.7
, pp. 203-214
-
-
Zhang, Z.1
Schwartz, S.2
Wagner, L.3
Miller, W.4
-
12
-
-
0036202921
-
PatternHunter: Faster and more sensitive homology search
-
Ma,B., Tromp,J. and Li,M. (2002) PatternHunter: faster and more sensitive homology search. Bioinformatics, 18, 440-445.
-
(2002)
Bioinformatics
, vol.18
, pp. 440-445
-
-
Ma, B.1
Tromp, J.2
Li, M.3
-
13
-
-
0004249246
-
-
W.H. Freeman and Co., New York, NY
-
Sokal,R.R. and Rohlf,F.J. (2000) Biometry. W.H. Freeman and Co., New York, NY.
-
(2000)
Biometry
-
-
Sokal, R.R.1
Rohlf, F.J.2
-
14
-
-
0036079158
-
The human genome browser at UCSC
-
Kent,J., Sugnet,C.W., Furey,T.S., Roskin,K.M., Pringle,T.H., Zahler,A.M. and Haussler,D. (2002) The human genome browser at UCSC. Genome Res., 12, 996-1006.
-
(2002)
Genome Res.
, vol.12
, pp. 996-1006
-
-
Kent, J.1
Sugnet, C.W.2
Furey, T.S.3
Roskin, K.M.4
Pringle, T.H.5
Zahler, A.M.6
Haussler, D.7
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