SCOPUS 정보 검색 플랫폼

Genome Research

Volumn 12, Issue 1, 2002, Pages 198-202

The KA/KS ratio test for assessing the protein-coding potential of genomic regions: An empirical and simulation study

(3) Nekrutenko, Anton a Makova, Kateryna D a Li, Wen Hsiung a

a UNIVERSITY OF CHICAGO (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN;

ARTICLE; AUTOMATION; COMPARATIVE STUDY; EMPIRICISM; EXON; GENE IDENTIFICATION; GENE SEQUENCE; GENETIC CODE; GENETIC VARIABILITY; HUMAN; MOUSE; NONHUMAN; NUCLEIC ACID BASE SUBSTITUTION; NUCLEOTIDE SEQUENCE; PREDICTION; PRIORITY JOURNAL; PROTEIN PROCESSING; SIMULATION;

ANIMALS; COMPUTATIONAL BIOLOGY; COMPUTER SIMULATION; EXONS; FALSE POSITIVE REACTIONS; GENES; GENOME; GENOME, HUMAN; HUMANS; MICE; MODELS, GENETIC; PROTEINS; PROTEOME; SEQUENCE HOMOLOGY, NUCLEIC ACID;

EID: 0036144777 PISSN: 10889051 EISSN: None Source Type: Journal
DOI: 10.1101/gr.200901 Document Type: Article

Times cited : (245)

References (13)

1
- 0033861549
- Human and mouse gene structure: Comparative analysis and application to exon prediction
- (2000) Genome Res. , vol.10 , pp. 950-958
- Batzoglou, S.¹ Pachter, L.² Mesirov, J.P.³ Berger, B.⁴ Lander, E.S.⁵

2
- 0033799618
- Active conservation of noncoding sequences revealed by three-way species comparisons
- (2000) Genome Res. , vol.10 , pp. 1304-1306
- Dubchak, I.¹ Brudno, M.² Loots, G.G.³ Pachter, L.⁴ Mayor, C.⁵ Rubin, E.M.⁶ Frazer, K.A.⁷

3
- 0028168856
- A codon-based model of nucleotide substitution for protein-coding DNA sequences
- (1994) Mol. Biol. Evol. , vol.11 , pp. 725-736
- Goldman, N.¹ Yang, Z.²

4
- 2042437650
- Initial sequencing and analysis of the human genome
- International Human Genome Sequencing Consortium
- (2001) Nature , vol.409 , pp. 860-919

5
- 0032884653
- Comparative analysis of noncoding regions of 77 orthologous mouse and human gene pairs
- (1999) Genome Res. , vol.9 , pp. 815-824
- Jareborg, N.¹ Birney, E.² Durbin, R.³

6
- 0033832676
- Conservation, regulation, synteny, and introns in a large-scale C. briggsae-C. elegans genomic alignment
- (2000) Genome Res. , vol.10 , pp. 1115-1125
- Kent, W.J.¹ Zahler, A.M.²

7
- 0000436649
- Rates and patterns of nucleotide substitutions
- (ed. W.-H. Li), Sinauer Associates, Sunderland, MA.
- (1997) Molecular Evolution , pp. 177-214
- Li, W.-H.¹

8
- 0032483028
- Evolutionary parameters of the transcribed mammalian genome: An analysis of 2,820 orthologous rodent and human sequences
- (1998) Proc. Natl. Acad. Sci. , vol.95 , pp. 9407-9412
- Makalowski, W.¹ Boguski, M.S.²

9
- 0035002807
- Evaluation of gene-finding programs on mammalian sequences
- (2001) Genome Res. , vol.11 , pp. 817-832
- Rogic, S.¹ Mackworth, A.K.² Ouellette, F.B.F.³

10
- 0027968068
- CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
- (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
- Thompson, J.D.¹ Higgins, D.G.² Gibson, T.J.³

11
- 0035895505
- The sequence of the human genome
- (2001) Science , vol.291 , pp. 1304-1351
- Venter, J.C.¹ Adams, M.D.² Myers, E.W.³ Li, W.P.⁴ Mural, R.J.⁵ Sutton, G.G.⁶ Smith, H.O.⁷ Yandell, M.⁸ Evans, C.A.⁹ Holt, R.A.¹⁰

12
- 0004139886
- Version 2. University College London, England.
- (1999) Phylogenetic Analysis by Maximum Likelihood (PAML)
- Yang, Z.¹

13
- 0033639150
- Statistical methods for detecting molecular adaptation
- (2000) Trends Ecol. Evol. , vol.15 , pp. 496-503
- Yang, Z.¹ Bielawski, J.P.²

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.