-
1
-
-
0033609566
-
Nucleosome dynamics IV. Protein and DNA contributions in the chiral transition of the tetrasome, the histone (H3-H4)2 tetramer-DNA particle
-
Alilat M., Sivolob A., Revet B., Prunell A. Nucleosome dynamics IV. Protein and DNA contributions in the chiral transition of the tetrasome, the histone (H3-H4)2 tetramer-DNA particle. J. Mol. Biol. 291:1999;815-841.
-
(1999)
J. Mol. Biol.
, vol.291
, pp. 815-841
-
-
Alilat, M.1
Sivolob, A.2
Revet, B.3
Prunell, A.4
-
2
-
-
0032726352
-
Chromatin condensation is confined to the loop and involves an all-or-none structural change
-
Balbi C., Sanna P., Barboro P., Alberti I., Barbesino M., Patrone E. Chromatin condensation is confined to the loop and involves an all-or-none structural change. Biophys. J. 77:1999;2725-2735.
-
(1999)
Biophys. J.
, vol.77
, pp. 2725-2735
-
-
Balbi, C.1
Sanna, P.2
Barboro, P.3
Alberti, I.4
Barbesino, M.5
Patrone, E.6
-
3
-
-
0028019457
-
Three-dimensional visualization of G1 chromosomes: A folded, twisted, supercoiled chromonema model of interphase chromatid structure
-
Belmont A.S., Bruce K., Li G. Three-dimensional visualization of G1 chromosomes: a folded, twisted, supercoiled chromonema model of interphase chromatid structure. J. Cell Biol. 127:1994;287-302.
-
(1994)
J. Cell Biol.
, vol.127
, pp. 287-302
-
-
Belmont, A.S.1
Bruce, K.2
Li, G.3
-
4
-
-
0036184236
-
Opening of compacted chromatin by early developmental transcription factors HNF3 (FoxA) and GATA-4
-
Cirillo A.L., Lin F.R., Cuesta I., Jarnik M., Zaret K.S. Opening of compacted chromatin by early developmental transcription factors HNF3 (FoxA) and GATA-4. Mol. Cell. 9:2002;279-289.
-
(2002)
Mol. Cell
, vol.9
, pp. 279-289
-
-
Cirillo, A.L.1
Lin, F.R.2
Cuesta, I.3
Jarnik, M.4
Zaret, K.S.5
-
5
-
-
0039591501
-
Physical constraints in the condensation of eukaryotic chromosomes. Local concentration of DNA versus linear packing ratio in higher order chromatin structures
-
Daban J.R. Physical constraints in the condensation of eukaryotic chromosomes. Local concentration of DNA versus linear packing ratio in higher order chromatin structures. Biochemistry. 39:2000;3861-3866.
-
(2000)
Biochemistry
, vol.39
, pp. 3861-3866
-
-
Daban, J.R.1
-
6
-
-
0345698703
-
Interdigitated solenoid model for compact chromatin fibers
-
Daban J.R., Bermudes A. Interdigitated solenoid model for compact chromatin fibers. Biochemistry. 37:1998;4299-4304.
-
(1998)
Biochemistry
, vol.37
, pp. 4299-4304
-
-
Daban, J.R.1
Bermudes, A.2
-
7
-
-
0036307707
-
Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 Å resolution
-
Davey C.A., Sargent D.F., Luger K., Maeder A.W., Richmond T.J. Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 Å resolution. J. Mol. Biol. 319:2002;1097-1113.
-
(2002)
J. Mol. Biol.
, vol.319
, pp. 1097-1113
-
-
Davey, C.A.1
Sargent, D.F.2
Luger, K.3
Maeder, A.W.4
Richmond, T.J.5
-
9
-
-
0029821228
-
Interaction of the histone (H3-H4)2 tetramer of the nucleosome with positively supercoiled DNA minicircles: Potential flipping of the protein from a left- to a right-handed superhelical form
-
Hamiche A., Carot V., Alilat M., De Lucia F., O'Donohue M.-F., Revet B., Prunell A. Interaction of the histone (H3-H4)2 tetramer of the nucleosome with positively supercoiled DNA minicircles: potential flipping of the protein from a left- to a right-handed superhelical form. P.N.A.S. 93:1996;7588-7593.
-
(1996)
P.N.A.S.
, vol.93
, pp. 7588-7593
-
-
Hamiche, A.1
Carot, V.2
Alilat, M.3
De Lucia, F.4
O'Donohue, M.-F.5
Revet, B.6
Prunell, A.7
-
12
-
-
0042415783
-
NAMD2: Greater scalability for parallel molecular dynamics
-
Kale L., Skeel R., Bhandarkar M., Brunner R., Gursoy A., Krawetz N., Phillips J., Shinozaki A., Varadarajan K., Schulten K. NAMD2: greater scalability for parallel molecular dynamics. J. Computat. Phys. 151:1999;283-312.
-
(1999)
J. Computat. Phys.
, vol.151
, pp. 283-312
-
-
Kale, L.1
Skeel, R.2
Bhandarkar, M.3
Brunner, R.4
Gursoy, A.5
Krawetz, N.6
Phillips, J.7
Shinozaki, A.8
Varadarajan, K.9
Schulten, K.10
-
14
-
-
0037178777
-
Modifying gene expression programs by altering core promoter chromatin architecture
-
Lomvardas S., Thanos D. Modifying gene expression programs by altering core promoter chromatin architecture. Cell. 110:2002;261-271.
-
(2002)
Cell
, vol.110
, pp. 261-271
-
-
Lomvardas, S.1
Thanos, D.2
-
15
-
-
1842411320
-
X-ray structure of the nucleosome core particle at 2.8 Å resolution
-
Luger K., Maeder A.W., Richmond R.K., Sargent D.F., Richmond T.J. X-ray structure of the nucleosome core particle at 2.8 Å resolution. Nature. 389:1997;251-259.
-
(1997)
Nature
, vol.389
, pp. 251-259
-
-
Luger, K.1
Maeder, A.W.2
Richmond, R.K.3
Sargent, D.F.4
Richmond, T.J.5
-
17
-
-
0242593434
-
Development and current status of the CHARMM force field for nucleic acids
-
MacKerell A.D. Jr., Banavali N., Foloppe N. Development and current status of the CHARMM force field for nucleic acids. Biopolymers. 56:2000-2001;257-265.
-
(2000)
Biopolymers
, vol.56
, pp. 257-265
-
-
MacKerell A.D., Jr.1
Banavali, N.2
Foloppe, N.3
-
18
-
-
0032553448
-
Chromatin conformation in living cells: Support for a zig-zag model of the 30 nm chromatin fiber
-
Rydberg B., Holley W.R., Mian S., Chatterjee A. Chromatin conformation in living cells: support for a zig-zag model of the 30. nm chromatin fiber J. Mol. Biol. 284:1998;71-84.
-
(1998)
J. Mol. Biol.
, vol.284
, pp. 71-84
-
-
Rydberg, B.1
Holley, W.R.2
Mian, S.3
Chatterjee, A.4
-
19
-
-
2142762197
-
-
Special issue on Epigenetics, 2001. Science 293, 1063-1105.
-
(2001)
Science
, vol.293
, pp. 1063-1105
-
-
-
20
-
-
0033612538
-
Large-scale chromatin unfolding and remodeling induced by VP16 acidic activation domain
-
Tumbar T., Sudlow G., Belmont A.S. Large-scale chromatin unfolding and remodeling induced by VP16 acidic activation domain. J. Cell Biol. 145:1999;1341-1354.
-
(1999)
J. Cell Biol.
, vol.145
, pp. 1341-1354
-
-
Tumbar, T.1
Sudlow, G.2
Belmont, A.S.3
-
22
-
-
35148834614
-
Intercalation and buckling instability of DNA linker within locked chromatin fiber
-
Victor, J.M., Ben-Haïm, E., Lesne, A., 2002. Intercalation and buckling instability of DNA linker within locked chromatin fiber. Phys. Rev. E. Rap. Com. 66, 060901.
-
(2002)
Phys. Rev. E. Rap. Com.
, vol.66
, pp. 060901
-
-
Victor, J.M.1
Ben-Haïm, E.2
Lesne, A.3
-
23
-
-
0036099317
-
Computer simulation of the 30-nanometer fiber
-
Wedemann G., Langowski J. Computer simulation of the 30-nanometer fiber. Biophys. J. 82:2002;2847-2859.
-
(2002)
Biophys. J.
, vol.82
, pp. 2847-2859
-
-
Wedemann, G.1
Langowski, J.2
-
24
-
-
0035903534
-
Structure of the yeast nucleosome core particle reveals fundamental changes in internucleosome interactions
-
White C.L., Suto R.K., Luger K. Structure of the yeast nucleosome core particle reveals fundamental changes in internucleosome interactions. EMBO J. 20(18):2001;5207-5218.
-
(2001)
EMBO J.
, vol.20
, Issue.18
, pp. 5207-5218
-
-
White, C.L.1
Suto, R.K.2
Luger, K.3
-
25
-
-
0035313770
-
Higher-order structure of chromatin and chromosomes
-
Woodcock L.C., Dimitrov S. Higher-order structure of chromatin and chromosomes. Curr. Opin. Genet. Dev. 11:2001;130-135.
-
(2001)
Curr. Opin. Genet. Dev.
, vol.11
, pp. 130-135
-
-
Woodcock, L.C.1
Dimitrov, S.2
-
26
-
-
0027517831
-
Chromatin folding model that incorporates linker variability generates fibers resembling the native structures
-
Woodcock C.L., Grigoryev S.A., Horowitz R.A., Whitaker N.A. Chromatin folding model that incorporates linker variability generates fibers resembling the native structures. Proc. Natl. Acad. Sci. USA. 90(19):1993;9021-9025.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, Issue.19
, pp. 9021-9025
-
-
Woodcock, C.L.1
Grigoryev, S.A.2
Horowitz, R.A.3
Whitaker, N.A.4
|