Interdigitated solenoid model for compact chromatin fibers

Biochemistry

Volumn 37, Issue 13, 1998, Pages 4299-4304

  Daban, Joan Ramon ^a   Bermúdez, Antonio ^a  

^a UNIVERSITAT AUTÒNOMA DE BARCELONA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL CELL; CHICKEN; CHROMATIN STRUCTURE; CONTROLLED STUDY; DNA HELIX; ERYTHROCYTE; GEOMETRY; MOLECULAR MODEL; NONHUMAN; NUCLEOSOME; PRIORITY JOURNAL; REVIEW; STRUCTURE ANALYSIS; X RAY CRYSTALLOGRAPHY;

CHROMATIN; DNA; MODELS, MOLECULAR; NUCLEIC ACID CONFORMATION; NUCLEOSOMES;

ANIMALIA; GALLUS GALLUS; SOLENOIDEA;

EID: 0345698703     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi973117h     Document Type: Review

References (55)

1. Bartolomé, S., Bermúdez, A., and Daban, J.-R. (1994) J. Cell Sci. 107, 2983.
2. Bartolomé, S., Bermúdez, A., and Daban, J.-R. (1995) J. Biol. Chem. 270, 22514.
3. Finch, J. T., and Klug, A. (1976) Proc. Natl. Acad. Sci. U.S.A. 73, 1897.
4. McGhee, J. D., Nickol, J. M., Felsenfeld, G., and Rau, D. C. (1983) Cell 33, 831.
5. Butler, P. J. G. (1984) EMBO J. 3, 2599.
6. Widom, J., and Klug, A. (1985) Cell 43, 207.
7. Widom, J. (1989) Annu. Rev. Biophys. Biophys. Chem. 18, 365.
8. Williams, S. P., Athey, B. D., Muglia, L. J., Schappe, R. S., Gough, A. H., and Langmore, J. P. (1986) Biophys. J. 49, 233.
9. Bordas, J., Perez-Grau, L., Koch, M. H. J., Vega, M. C., and Nave, C. (1986) Eur. Biophys. J. 13, 175.
10. Koch, M. H. J. (1989) in Protein-Nucleic Acid Interaction (Saenger, W., and Heinemann, U., Eds.) pp 163-204, Macmillan Press, London.
11. Staynov, D. Z. (1983) Int. J. Biol. Macromol. 5, 3.
12. Subirana, J. A., Muñoz-Guerra, S., Aymamí, J., Radermacher, M., and Frank, J. (1985) Chromosoma 91, 377.
13. Woodcock, C. L., Grigoryev, S. A., Horowitz, R. A., and Whitaker, N. (1993) Proc. Natl Acad. Sci. U.S.A. 90, 9021.
14. Leuba, S. H., Yang, G., Robert, C., Samori, B., van Holde, K., Zlatanova, J., and Bustamante, C. (1994) Proc. Natl. Acad. Sci. U.S.A. 91, 11621.
15. Richmond, T. J., Finch, J. T., Rushton, B., Rhodes, D., and Klug, A. (1984) Nature 311, 532.
16. Uberbacher, E. C., and Bunick, G. J. (1989) J. Biomol. Struct. Dyn. 7, 1.
17. Struck, M.-M., Klug, A., and Richmond, T. J. (1992) J. Mol. Biol. 224, 253.
18. Luger, K., Mäder, A. W., Richmond, R. K., Sargent, D. F., and Richmond, T. J. (1997) Nature 389, 251.
19. Klug, A., Rhodes, D., Smith, J., Finch, J. T., and Thomas, J. O. (1980) Nature 287, 509.
20. Arents, G., Burlingame, R. W., Wang, B.-C., Love, W. E., and Moudrianakis, E. N. (1991) Proc. Natl. Acad. Sci. U.S.A. 88, 10148.
21. Arents, G., and Moudrianakis, E. N. (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 10489.
22. van Holde, K., and Zlatanova, J. (1995) J. Biol. Chem. 270, 8373.
23. van Holde, K., and Zlatanova, J. (1996) Proc. Natl. Acad. Sci. U.S.A. 93, 10548.
24. Williams, S. P., and Langmore, J. P. (1991) Biophys. J. 59, 606.
25. Graziano, V., Gerchman, S. E., Schneider, D. K., and Ramakrishnan, V. (1994) Nature 368, 351.
26. Serdyuk, I. N. (1979) Methods Enzymol. 59, 750.
27. Bradbury, E. M., and Baldwin, J. P. (1986) Cell Biophys. 9, 35.
28. Uberbacher, E. C., Harp, J. M., Wilkinson-Singley, E., and Bunick, G. J. (1986) Science 232, 1247.
29. von Holt, C., Brandt, W. F., Greyling, H. J., Lindsey, G. G., Retief, J. D., Rodrigues, J. de A., Schwager, S., and Sewell, B. T. (1989) Methods Enzymol. 170, 431.
30. Graziano, V., Gerchman, S. E., and Ramakrishnan, V. (1988) J. Mol. Biol. 203, 997.
31. Koch, M. H. J., Vega, M. C., Sayers, Z., and Michon, A. M. (1987) Eur. Biophys. J. 14, 307.
32. Greulich, K. O., Wachtel, E., Ausio, J., Seger, D., and Eisenberg, H. (1987) J. Mol. Biol. 193, 709.
33. Makarov, V., Dimitrov, S., Smirnov, V., and Pashev, I. (1985) FEBS Lett. 181, 357.
34. Woodcock, C. L. F., Frado, L.-L. Y., and Rattner, J. B. (1984) J. Cell Biol. 99, 42.
35. Thomas, J. O., and Butler, P. J. G. (1980) J. Mol. Biol. 144, 89.
36. Timsit, Y., and Moras, D. (1994) EMBO J. 13, 2737.
37. Tatchell, K., and van Holde, K. E. (1978) Proc. Natl. Acad. Sci. U.S.A. 75, 3583.
38. Finch, J. T., Lutter, L. C., Rhodes, D., Brown, R. S., Rushton, B., Levitt, M., and Klug, A. (1977) Nature 269, 29.
39. Dubochet, J., and Noll, M. (1978) Science 202, 280.
40. Yao, J., Lowary, P. T., and Widom, J. (1991) Biochemistry 30, 8408.
41. Thomas, J. O., and Kornberg, R. D. (1975) Proc. Natl. Acad. Sci. U.S.A. 72, 2626.
42. Sperling, R., and Wachtel, E. J. (1981) Adv. Protein Chem. 34, 1.
43. Greyling, H. J., Schwager, S., Sewell, T., and von Holt, C. (1983) Eur. J. Biochem. 137, 221.
44. Yabuki, H., Dattagupta, N., and Crothers, D. M. (1982) Biochemistry 21, 5015.
45. Mitra, S., Sen, D., and Crothers, D. M. (1984) Nature 308, 247.
46. Zlatanova, J., Leuba, S. H., Yang G., Bustamante, C., and van Holde, K. (1994) Proc. Natl. Acad. Sci. U.SA. 91, 5277.
47. Gerchman, S. E., and Ramakrishnan, V. (1987) Proc. Natl. Acad. Sci. U.S.A. 84, 7802.
48. Bednar, J., Horowitz, R. A., Dubochet, J., and Woodcock, C. L. (1995) J. Cell Biol. 131, 1365.
49. Pehrson, J. R. (1995) J. Biol. Chem. 270, 22440.
50. Goytisolo, F. A., Gerchman, S. E., Yu, X., Rees, C., Graziano, V., Ramakrishnan, V., and Thomas, J. O. (1996) EMBO J. 15, 3421.
51. Pruss, D., Bartholomew, B., Persinger, J., Hayes J., Arents, G., Moudrianakis, E. N., and Wolffe, A. P. (1996) Science 274, 614.
52. Crane-Robinson, C. (1997) Trends Biochem. Sci. 22, 75.
53. Kellenberger, E., Carlemalm, E., Sechaud, J., Ryter, A., and de Haller, G. (1986) in Bacterial Chromatin (Gualerzi, C. O., and Pon, C. L., Eds.) pp 11-25, Springer-Verlag, Berlin.
54. Kellenberger, E. (1987) Trends Biochem. Sci. 12, 105.
55. Suzuki, M., and Wakabayashi, T. (1988) J. Mol. Biol. 204, 653.