-
1
-
-
0028044574
-
Evolutionary relationships among pyridoxal-5′-phosphate dependent enzymes
-
Alexander W., Sandmeyer E., Metha P., Christen P. Evolutionary relationships among pyridoxal-5′-phosphate dependent enzymes. Eur. J. Biochem. 219:1994;953-960.
-
(1994)
Eur. J. Biochem.
, vol.219
, pp. 953-960
-
-
Alexander, W.1
Sandmeyer, E.2
Metha, P.3
Christen, P.4
-
2
-
-
0030801002
-
Gapped blast and psi-blast: A new generation of protein database search programs
-
Altschul S.F., Madden T.L., Schaffer A.A., Zhang Z., Miller W., Lipman D.J. Gapped blast and psi-blast: a new generation of protein database search programs. Nucleic Acids Res. 25:1997;3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, Z.4
Miller, W.5
Lipman, D.J.6
-
3
-
-
85031075214
-
-
Japanese Patent JP 1998215883-A
-
Araki, M., Sugimoto, M., Yoshihara, Y., Nakamatsu, W., 1998. gDNA encoding aspartate transferase (AAT). Japanese Patent JP 1998215883-A, 21.
-
(1998)
gDNA encoding aspartate transferase (AAT)
, pp. 21
-
-
Araki, M.1
Sugimoto, M.2
Yoshihara, Y.3
Nakamatsu, W.4
-
4
-
-
0011542799
-
The Pfam protein families database
-
Bateman A., Birney E., Cerruti L., Durbin R., Etwiller L., Eddy S., Griffiths-Jones S., Howe K., Marshall M., Sonnhammer E. The Pfam protein families database. Nucleic Acids Res. 30:2002;276-280.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 276-280
-
-
Bateman, A.1
Birney, E.2
Cerruti, L.3
Durbin, R.4
Etwiller, L.5
Eddy, S.6
Griffiths-Jones, S.7
Howe, K.8
Marshall, M.9
Sonnhammer, E.10
-
5
-
-
0036062693
-
GabR, a member of a novel protein family, regulates the utilization of γ-aminobutyrate in Bacillus subtilis
-
Belitsky B., Sonenshein A. GabR, a member of a novel protein family, regulates the utilization of γ-aminobutyrate in Bacillus subtilis. Mol. Microbiol. 45:2002;569-583.
-
(2002)
Mol. Microbiol.
, vol.45
, pp. 569-583
-
-
Belitsky, B.1
Sonenshein, A.2
-
6
-
-
0033485517
-
Improved microbial gene identification with GLIMMER
-
Delcher A., Harmon D., Kasif S., White O., Salzberg S. Improved microbial gene identification with GLIMMER. Nucleic Acids Res. 27:1999;4636-4641.
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 4636-4641
-
-
Delcher, A.1
Harmon, D.2
Kasif, S.3
White, O.4
Salzberg, S.5
-
9
-
-
0031743421
-
Profile hidden Markov models
-
Eddy S. Profile hidden Markov models. Bioinformatics. 14:1998;755-763.
-
(1998)
Bioinformatics
, vol.14
, pp. 755-763
-
-
Eddy, S.1
-
10
-
-
0035025630
-
Isolation of pdx2, a novel gene in the pyridoxine biosynthesis pathway of eukaryotes, archaebacteria, and a subset of eubacteria
-
Ehrenshaft M., Daub M. Isolation of pdx2, a novel gene in the pyridoxine biosynthesis pathway of eukaryotes, archaebacteria, and a subset of eubacteria. J. Bacteriol. 183:2002;3383-3390.
-
(2002)
J. Bacteriol.
, vol.183
, pp. 3383-3390
-
-
Ehrenshaft, M.1
Daub, M.2
-
11
-
-
0014800108
-
Distinguishing homologous from analogous proteins
-
Fitch W. Distinguishing homologous from analogous proteins. Syst. Zool. 19:1970;99-113.
-
(1970)
Syst. Zool.
, vol.19
, pp. 99-113
-
-
Fitch, W.1
-
12
-
-
0027134262
-
Genomic organization of the biotin biosynthetic genes in coryneform bacteria: Cloning and sequencing of bioA and bioD from Brevibacterium flavum
-
Hatakeyama K., Hohama K., Vertes A., Kobayashi M., Kurusu Y., Yukawa H. Genomic organization of the biotin biosynthetic genes in coryneform bacteria: cloning and sequencing of bioA and bioD from Brevibacterium flavum. DNA Sequence. 4:1993;177-184.
-
(1993)
DNA Sequence
, vol.4
, pp. 177-184
-
-
Hatakeyama, K.1
Hohama, K.2
Vertes, A.3
Kobayashi, M.4
Kurusu, Y.5
Yukawa, H.6
-
13
-
-
0042431971
-
Identification and characterization of the last two unknown genes, dapC and dapF, in the succinylase branch of the L-lysine biosynthesis of Corynebacterium glutamicum
-
Hartmann M., Tauch A., Eggeling L., Bathe B., Möckel B., Pühler A., Kalinowski J. Identification and characterization of the last two unknown genes, dapC and dapF, in the succinylase branch of the L-lysine biosynthesis of Corynebacterium glutamicum. J. Biotechnol. 104:2003;199-211.
-
(2003)
J. Biotechnol.
, vol.104
, pp. 199-211
-
-
Hartmann, M.1
Tauch, A.2
Eggeling, L.3
Bathe, B.4
Möckel, B.5
Pühler, A.6
Kalinowski, J.7
-
15
-
-
0017272554
-
Enzyme recruitment in evolution of new function
-
Jensen R. Enzyme recruitment in evolution of new function. Annu. Rev. Microbiol. 30:1976;409-425.
-
(1976)
Annu. Rev. Microbiol.
, vol.30
, pp. 409-425
-
-
Jensen, R.1
-
16
-
-
0034893812
-
Orthologs and paralogs - we need to get it right
-
Comment 1005
-
Jensen, R., 2001. Orthologs and paralogs - we need to get it right. Genome Biology 2, Comment 1005.
-
(2001)
Genome Biology 2
-
-
Jensen, R.1
-
17
-
-
0019399939
-
Intracellular roles of microbial aminotransferases: Overlap enzymes across different biochemical pathways
-
Jensen R., Calhoun D. Intracellular roles of microbial aminotransferases: overlap enzymes across different biochemical pathways. Crit. Rev. Microbiol. 8:1981;229-266.
-
(1981)
Crit. Rev. Microbiol.
, vol.8
, pp. 229-266
-
-
Jensen, R.1
Calhoun, D.2
-
18
-
-
0029919942
-
Evolutionary recruitment of biochemically specialized subdivisions of family 1 within the protein superfamily of aminotransferases
-
Jensen R., Gu W. Evolutionary recruitment of biochemically specialized subdivisions of family 1 within the protein superfamily of aminotransferases. J. Bacteriol. 178:1996;2161-2172.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 2161-2172
-
-
Jensen, R.1
Gu, W.2
-
19
-
-
0021278824
-
Protoplast transformation of glutamate-producing bacteria with plasmid DNA
-
Katsumata R., Ozaki A., Oka T., Furuya A. Protoplast transformation of glutamate-producing bacteria with plasmid DNA. J. Bacteriol. 159:1984;306-311.
-
(1984)
J. Bacteriol.
, vol.159
, pp. 306-311
-
-
Katsumata, R.1
Ozaki, A.2
Oka, T.3
Furuya, A.4
-
20
-
-
0027535572
-
Homology of pyridoxal-5′-phosphate-dependent aminotransferases with the cobC (cobalamin synthesis), nifS (nitrogen fixation), pabC (p-aminobenzoate synthesis) and malY (abolishing endogenous induction of the maltose system) gene products
-
Mehta P., Christen P. Homology of pyridoxal-5′-phosphate-dependent aminotransferases with the cobC (cobalamin synthesis), nifS (nitrogen fixation), pabC (p-aminobenzoate synthesis) and malY (abolishing endogenous induction of the maltose system) gene products. Eur. J. Biochem. 211:1993;373-376.
-
(1993)
Eur. J. Biochem.
, vol.211
, pp. 373-376
-
-
Mehta, P.1
Christen, P.2
-
21
-
-
0028358526
-
Homology of 1-aminocyclopropane-1-carboxylate synthase, 8-amino-7-oxononanoate synthase, 2-amino-6-caprolactam racemase, 2,2-dialkylglycine decarboxylase, glutamate-1-semialdehyde 2,1-aminomutase and isopenicillin-n-epimerase with aminotransferases
-
Mehta P., Christen P. Homology of 1-aminocyclopropane-1-carboxylate synthase, 8-amino-7-oxononanoate synthase, 2-amino-6-caprolactam racemase, 2,2-dialkylglycine decarboxylase, glutamate-1-semialdehyde 2,1-aminomutase and isopenicillin-n-epimerase with aminotransferases. Biochem. Biophys. Res. Commun. 198:1994;138-143.
-
(1994)
Biochem. Biophys. Res. Commun.
, vol.198
, pp. 138-143
-
-
Mehta, P.1
Christen, P.2
-
22
-
-
0027297771
-
Aminotransferases: Demonstration of homology and division into evolutionary subgroups
-
Mehta P., Hale T., Christen P. Aminotransferases: demonstration of homology and division into evolutionary subgroups. Eur. J. Biochem. 214:1993;549-561.
-
(1993)
Eur. J. Biochem.
, vol.214
, pp. 549-561
-
-
Mehta, P.1
Hale, T.2
Christen, P.3
-
23
-
-
0037561991
-
GenDB - An open source genome annotation system for prokaryote genomes
-
Meyer F., Goesmann A., McHardy A.C., Bartels D., Bekel T., Clausen J., Kalinowski J., Linke B., Rupp O., Giegerich R., Pühler A. GenDB - an open source genome annotation system for prokaryote genomes. Nucleic Acids Res. 31:2003;2187-2195.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 2187-2195
-
-
Meyer, F.1
Goesmann, A.2
McHardy, A.C.3
Bartels, D.4
Bekel, T.5
Clausen, J.6
Kalinowski, J.7
Linke, B.8
Rupp, O.9
Giegerich, R.10
Pühler, A.11
-
24
-
-
0023984847
-
Optimal alignments in linear space
-
Myers E., Miller W. Optimal alignments in linear space. CABIOS. 4:1989;11-17.
-
(1989)
CABIOS
, vol.4
, pp. 11-17
-
-
Myers, E.1
Miller, W.2
-
25
-
-
0033551830
-
The extremely conserved pyroA gene of Aspergillus nidulans is required for pyridoxine synthesis and is required indirectly for resistance to photosensitizer
-
Osmani A., May G., Osmani S. The extremely conserved pyroA gene of Aspergillus nidulans is required for pyridoxine synthesis and is required indirectly for resistance to photosensitizer. J. Biol. Chem. 274:1999;23565-23569.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 23565-23569
-
-
Osmani, A.1
May, G.2
Osmani, S.3
-
26
-
-
0036244782
-
Linking central metabolism with increased pathway flux: L-valine accumulation by Corynebacterium glutamicum
-
Radmacher E., Vaitsikova A., Burger U., Krumbach K., Sahm H., Eggeling L. Linking central metabolism with increased pathway flux: L-valine accumulation by Corynebacterium glutamicum. Appl. Environ. Microbiol. 68:2002;2246-2250.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 2246-2250
-
-
Radmacher, E.1
Vaitsikova, A.2
Burger, U.3
Krumbach, K.4
Sahm, H.5
Eggeling, L.6
-
27
-
-
0037066712
-
Subdivision of the helix-turn-helix GntR family of bacterial regulators in the FadR, HutC, MocR, and YtrA subfamilies
-
Rigali S., Derouaux A., Giannotta F., Dusart J. Subdivision of the helix-turn-helix GntR family of bacterial regulators in the FadR, HutC, MocR, and YtrA subfamilies. J. Biol. Chem. 277:2002;12507-12515.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 12507-12515
-
-
Rigali, S.1
Derouaux, A.2
Giannotta, F.3
Dusart, J.4
-
28
-
-
0026750938
-
The Corynebacterium glutamicum aecD gene encodes a C-S lyase with α, β-elimination activity that degrades aminoethylcysteine
-
Rossol L., Pühler A. The Corynebacterium glutamicum aecD gene encodes a C-S lyase with α, β-elimination activity that degrades aminoethylcysteine. J. Bacteriol. 174:1992;2968-2977.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 2968-2977
-
-
Rossol, L.1
Pühler, A.2
-
29
-
-
0030049883
-
Genes and enzymes of the acetyl cycle of arginine biosynthesis in Corynebacterium glutamicum: Enzyme evolution in the early steps of the arginine pathway
-
Sakanyan V., Petrosyan P., Lecocq M., Boyen A., Legrain C., Demarez M., Hallet J., Glansdorff N. Genes and enzymes of the acetyl cycle of arginine biosynthesis in Corynebacterium glutamicum: enzyme evolution in the early steps of the arginine pathway. Microbiology. 142:1996;99-108.
-
(1996)
Microbiology
, vol.142
, pp. 99-108
-
-
Sakanyan, V.1
Petrosyan, P.2
Lecocq, M.3
Boyen, A.4
Legrain, C.5
Demarez, M.6
Hallet, J.7
Glansdorff, N.8
-
31
-
-
0028289983
-
Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: Selection of defined deletions in the chromosome of Corynebacterium glutamicum
-
Schäfer A., Tauch A., Jäger W., Kalinowski J., Thierbach G., Pühler A. Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum. Gene. 145:1994;69-73.
-
(1994)
Gene
, vol.145
, pp. 69-73
-
-
Schäfer, A.1
Tauch, A.2
Jäger, W.3
Kalinowski, J.4
Thierbach, G.5
Pühler, A.6
-
32
-
-
14744281449
-
Manipulation of Corynebacterium glutamicum by gene disruption and replacement
-
Schwarzer A., Pühler A. Manipulation of Corynebacterium glutamicum by gene disruption and replacement. Bio/Technology. 9:1991;84-87.
-
(1991)
Bio/Technology
, vol.9
, pp. 84-87
-
-
Schwarzer, A.1
Pühler, A.2
-
33
-
-
0345676554
-
Multiple sequence alignment with the divide-and-conquer method
-
Stoye J. Multiple sequence alignment with the divide-and-conquer method. Gene. 211:1998;45-56.
-
(1998)
Gene
, vol.211
, pp. 45-56
-
-
Stoye, J.1
-
34
-
-
0029144437
-
Crystal structure of a D-amino acid aminotransferase: How the protein controls stereoselectivity
-
Sugio S., Petsko G., Manning J., Soda K., Ringe D. Crystal structure of a D-amino acid aminotransferase: how the protein controls stereoselectivity. Biochemistry. 34:1995;9661-9669.
-
(1995)
Biochemistry
, vol.34
, pp. 9661-9669
-
-
Sugio, S.1
Petsko, G.2
Manning, J.3
Soda, K.4
Ringe, D.5
-
35
-
-
0029133105
-
The Corynebacterium xerosis composite transposon Tn5432 consists of two identical insertion sequences, designated IS1249 flanking the erythromycin resistance gene ermCX
-
Tauch A., Kassing F., Kalinowski J., Pühler A. The Corynebacterium xerosis composite transposon Tn5432 consists of two identical insertion sequences, designated IS1249 flanking the erythromycin resistance gene ermCX. Plasmid. 34:1995;119-131.
-
(1995)
Plasmid
, vol.34
, pp. 119-131
-
-
Tauch, A.1
Kassing, F.2
Kalinowski, J.3
Pühler, A.4
-
36
-
-
0037171594
-
Strategy to sequence the genome of Corynebacterium glutamicum ATCC 13032: Use of a cosmid and a bacterial artificial chromosome library
-
Tauch A., Homann L., Mormann S., Rüberg S., Billault A., Bathe B., Brand S., Brockmann-Gretza O., Rückert C., Schischka W., Wrenger C., Hoheisel J., Möckel B., Huthmacher K., Pfefferle W., Pühler A., Kalinowski J. Strategy to sequence the genome of Corynebacterium glutamicum ATCC 13032: use of a cosmid and a bacterial artificial chromosome library. J. Biotechnol. 95:2002;25-38.
-
(2002)
J. Biotechnol.
, vol.95
, pp. 25-38
-
-
Tauch, A.1
Homann, L.2
Mormann, S.3
Rüberg, S.4
Billault, A.5
Bathe, B.6
Brand, S.7
Brockmann-Gretza, O.8
Rückert, C.9
Schischka, W.10
Wrenger, C.11
Hoheisel, J.12
Möckel, B.13
Huthmacher, K.14
Pfefferle, W.15
Pühler, A.16
Kalinowski, J.17
-
37
-
-
0036835575
-
Efficient electrotransformation of Corynebacterium diphtheriae with a mini-replicon derived from the Corynebacterium glutamicum plasmid pGA1
-
Tauch A., Kirchner O., Löffler B., Götker S., Pühler A., Kalinowski J. Efficient electrotransformation of Corynebacterium diphtheriae with a mini-replicon derived from the Corynebacterium glutamicum plasmid pGA1. Curr. Microbiol. 45:2002;362-367.
-
(2002)
Curr. Microbiol.
, vol.45
, pp. 362-367
-
-
Tauch, A.1
Kirchner, O.2
Löffler, B.3
Götker, S.4
Pühler, A.5
Kalinowski, J.6
-
38
-
-
0001348712
-
Biosynthesis of branched-chain amino acids
-
F. Neidhardt, R. III Curtis, J. Ingraham, E. Lin, K. Low, B. Magasanik, W. Reznikoff, M. Riley, M. Schaechter, Umbarger H.E. second ed Washington, DC: ASM Press
-
Umbarger H. Biosynthesis of branched-chain amino acids. Neidhardt F., Curtis R. III, Ingraham J., Lin E., Low K., Magasanik B., Reznikoff W., Riley M., Schaechter M., Umbarger H.E. second ed Escherichia coli and Salmonella: Cellular and Molecular Biology. 1:1996;442-457 ASM Press, Washington, DC.
-
(1996)
Escherichia coli and Salmonella: Cellular and Molecular Biology
, vol.1
, pp. 442-457
-
-
Umbarger, H.1
-
40
-
-
0037137210
-
Purification, characterization and identification of cysteine desulfhydrase of Corynebacterium glutamicum, and its relationship to cysteine production
-
Wada M., Awano N., Haisa K., Takagi H., Nakamori S. Purification, characterization and identification of cysteine desulfhydrase of Corynebacterium glutamicum, and its relationship to cysteine production. FEMS Microbiol. Lett. 217:2002;103-107.
-
(2002)
FEMS Microbiol. Lett.
, vol.217
, pp. 103-107
-
-
Wada, M.1
Awano, N.2
Haisa, K.3
Takagi, H.4
Nakamori, S.5
-
41
-
-
0000232594
-
Biosynthesis of histidine
-
F. Neidhardt, R. III Curtis, J. Ingraham, E. Lin, K. Low, B. Magasanik, W. Reznikoff, M. Riley, M. Schaechter, Umbarger H.E. second ed Washington, DC: ASM Press
-
Winkler M. Biosynthesis of histidine. Neidhardt F., Curtis R. III, Ingraham J., Lin E., Low K., Magasanik B., Reznikoff W., Riley M., Schaechter M., Umbarger H.E. second ed Escherichia coli and Salmonella: Cellular and Molecular Biology. 1:1996;485-505 ASM Press, Washington, DC.
-
(1996)
Escherichia coli and Salmonella: Cellular and Molecular Biology
, vol.1
, pp. 485-505
-
-
Winkler, M.1
|