Energetics and specificity of interactions within Ub·Uev·Ubc13 human ubiquitin conjugation complexes

Biochemistry

Volumn 42, Issue 26, 2003, Pages 7922-7930

  McKenna, Sean ^a   Hu, Jing ^a   Moraes, Trevor ^a   Xiao, Wei ^b   Ellison, Michael J ^a   Spyracopoulos, Leo ^a  

^a UNIVERSITY OF ALBERTA   (Canada)

^b UNIVERSITY OF SASKATCHEWAN   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

CATALYSIS; DISSOCIATION; DNA; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PROTEINS; THERMODYNAMICS;

SIGNAL TRANSDUCTION;

BIOCHEMISTRY;

DNA; IMMUNOGLOBULIN ENHANCER BINDING PROTEIN; LYSINE; POLYUBIQUITIN; THIOESTER; UBIQUITIN; UBIQUITIN CONJUGATING ENZYME;

ARTICLE; CALORIMETRY; CHEMICAL REACTION KINETICS; COMPLEX FORMATION; DISSOCIATION CONSTANT; DNA REPAIR; ENERGY TRANSFER; ENZYME DEGRADATION; HUMAN; PRIORITY JOURNAL; PROTEIN PROTEIN INTERACTION; PROTON NUCLEAR MAGNETIC RESONANCE; SIGNAL TRANSDUCTION; THERMODYNAMICS;

AMINO ACID SEQUENCE; BINDING SITES; CATALYSIS; DIMERIZATION; HUMANS; LIGASES; LYSINE; MAGNETIC RESONANCE SPECTROSCOPY; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PROTEIN BINDING; PROTEIN CONFORMATION; SEQUENCE HOMOLOGY, AMINO ACID; THERMODYNAMICS; TRANS-ACTIVATORS; TRANSCRIPTION FACTORS; UBIQUITIN; UBIQUITIN-CONJUGATING ENZYMES;

EUKARYOTA;

EID: 0038724478     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi034480t     Document Type: Article

References (38)

1. Peters, J.-M., King, R. W., and Deshaies, R. J. (1998) Ubiquitin and the Biology of the Cell, Plenum Press, New York.
2. Chen, Z. J., Parent, L., and Maniatis, T. (1996) Cell 84, 853-862.
3. Deng, L., Wang, C., Spencer, E., Yang, L., Braun, A., You, J., Slaughter, C., Pickart, C., and Chen, Z. J. (2000) Cell 103, 351-361.
4. Jentsch, S., McGrath, J. P., and Varshavsky, A. (1987) Nature 329, 131-134.
5. Hoege, C., Pfander, B., Moldovan, G. L., Pyrowolakis, G., and Jentsch, S. (2002) Nature 419, 135-141.
6. Finley, D., Bartel, B., and Varshavsky, A. (1989) Nature 338, 394-401.
7. Hicke, L., and Riezman, H. (1996) Cell 84, 277-287.
8. Glickman, M. H., and Ciechanover, A. (2002) Physiol. Rev. 82, 373-428.
9. Hochstrasser, M. (1996) Annu. Rev. Genet. 30, 405-439.
10. Hicke, L. (2001) Nat. Rev. Mol. Cell Biol. 2, 195-201.
11. Pickart, C. M. (2000) Trends Biochem. Sci. 25, 544-548.
12. Chau, V., Tobias, J. W., Bachmair, A., Marriott, D., Ecker, D. J., Gonda, D. K., and Varshavsky, A. (1989) Science 243, 1576-1583.
13. Arnason, T., and Ellison, M. J. (1994) Mol. Cell. Biol. 14, 7876-7883.
14. Johnson, E. S., Ma, P. C., Ora, I. M., and Varshavsky, A. (1995) J. Biol. Chem. 270, 17442-17456.
15. Spence, J., Sadis, S., Haas, A. L., and Finley, D. (1995) Mol. Cell. Biol. 15, 1265-1273.
16. Baboshina, O. V., and Haas, A. L. (1996) J. Biol. Chem. 271, 2823-2831.
17. Koegl, M., Hoppe, T., Schlenker, S., Ulrich, H. D., Mayer, T. U., and Jentsch, S. (1999) Cell 96, 635-644.
18. Wang, C., Deng, L., Hong, M., Akkaraju, G. R., Inoue, J., and Chen, Z. J. (2001) Nature 412, 346-351.
19. Broomfield, S., Chow, B. L., and Xiao, W. (1998) Proc. Natl. Acad. Sci. U.S.A. 95, 5678-5683.
20. Hofmann, R. M., and Pickart, C. M. (2001) J. Biol. Chem. 276, 27936-27943.
21. Brusky, J., Zhu, Y., and Xiao, W. (2000) Curr. Genet. 37, 168-174.
22. Ulrich, H. D. (2003) J. Biol. Chem. 278, 7051-7058.
23. Hofmann, R. M., and Pickart, C. M. (1999) Cell 96, 645-653.
24. Moraes, T. F., Edwards, R. A., McKenna, S., Pastushok, L., Xiao, W., Glover, J. N., and Ellison, M. J. (2001) Nat. Struct. Biol. 8, 669-673.
25. VanDemark, A. P., Hofmann, R. M., Tsui, C., Pickart, C. M., and Wolberger, C. (2001) Cell 105, 711-720.
26. McKenna, S., Moraes, T., Pastushok, L., Ptak, C., Xiao, W., Spyracopoulos, L., and Ellison, M. J. (2003) J. Biol. Chem. 278, 13151-13158.
27. McKenna, S., Spyracopoulos, L., Moraes, T., Pastushok, L., Ptak, C., Xiao, W., and Ellison, M. J. (2001) J. Biol. Chem. 276, 40120-40126.
28. Kay, L. E., Keifer, P., and Saarinen, T. (1992) J. Am. Chem. Soc. 114, 10663-10665.
29. Zhang, O., Kay, L. E., Olivier, J. P., and Forman-Kay, J. D. (1994) J. Biomol. NMR 4, 845-858.
30. Delaglio, F., Grzesiek, S., Vuister, G. W., Zhu, G., Pfeifer, J., and Bax, A. (1995) J. Biomol. NMR 6, 277-293.
31. Johnson, B. A., and Blevins, R. A. (1994) J. Chem. Phys. 29, 1012-1014.
32. McKay, R. T., Tripet, B. P., Hodges, R. S., and Sykes, B. D. (1997) J. Biol. Chem. 272, 28494-28500.
33. Williams, T. C., Shelling, J. G., and Sykes, B. D. (1985) in NMR in the Life Science (Bradbury, A. M., and Nicolini, C., Eds.) pp 93-104, Plenum Press, New York.
34. Wolfram, S. (1996) The Mathematica Book, 3rd ed., Wolfram Media/Cambridge University Press, Cambridge, U.K.
35. Sutherland, I. O. (1971) Annual Reports on NMR Spectroscopy, Vol. 4, Academic Press, New York.
36. Zuiderweg, E. R. (2002) Biochemistry 41, 1-7.
37. Mercier, P., Li, M. X., and Sykes, B. D. (2000) Biochemistry 39, 2902-2911.
38. Pomillos, O., Alam, S. L., Rich, R. L., Myszka, D. G., Davis, D. R., and Sundquist, W. I. (2002) EMBO J. 21, 2397-2406.