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Volumn 4, Issue , 2003, Pages

Fragile X (CGG)n repeats induce a transcriptional repression in cis upon a linked promoter: Evidence for a chromatin mediated effect

Author keywords

[No Author keywords available]

Indexed keywords

FRAGILE X MENTAL RETARDATION PROTEIN; HISTONE DEACETYLASE; MESSENGER RNA; THYMIDINE KINASE; TRICHOSTATIN A; CYTOSINE; ENZYME INHIBITOR; FXR1 PROTEIN, HUMAN; GUANINE; HYDROXAMIC ACID; RNA BINDING PROTEIN; VIRUS PROTEIN;

EID: 0038150132     PISSN: 14712199     EISSN: None     Source Type: Journal    
DOI: 10.1186/1471-2199-4-3     Document Type: Article
Times cited : (13)

References (65)
  • 1
    • 0034639857 scopus 로고    scopus 로고
    • Understanding the molecular basis of fragile X syndrome
    • Jin P and Warren ST Understanding the molecular basis of fragile X syndrome Hum Mol Genet 2000, 9:901-908
    • (2000) Hum. Mol. Genet. , vol.9 , pp. 901-908
    • Jin, P.1    Warren, S.T.2
  • 3
    • 0029156798 scopus 로고
    • FMR1 triplet arrays: Paying the price for perfection
    • Hirst MC FMR1 triplet arrays: paying the price for perfection J Med Genet 1995, 32:761-763
    • (1995) J. Med. Genet. , vol.32 , pp. 761-763
    • Hirst, M.C.1
  • 6
    • 0025968567 scopus 로고
    • Abnormal pattern detected in fragile-X patients by pulsed-field gel electrophoresis
    • Vincent A, Heitz D, Petit C, Kretz C, Oberle I and Mandel JL Abnormal pattern detected in fragile-X patients by pulsed-field gel electrophoresis Nature 1991, 349:624-626
    • (1991) Nature , vol.349 , pp. 624-626
    • Vincent, A.1    Heitz, D.2    Petit, C.3    Kretz, C.4    Oberle, I.5    Mandel, J.L.6
  • 8
    • 0027176828 scopus 로고
    • Association of fragile X syndrome with delayed replication of the FMR1 gene
    • Hansen RS, Canfield TK, Lamb MM, Gartler SM and Laird CD Association of fragile X syndrome with delayed replication of the FMR1 gene Cell 1993, 73:1403-1409
    • (1993) Cell , vol.73 , pp. 1403-1409
    • Hansen, R.S.1    Canfield, T.K.2    Lamb, M.M.3    Gartler, S.M.4    Laird, C.D.5
  • 13
    • 0342424768 scopus 로고    scopus 로고
    • Co-localisation of CCG repeats and chromosome deletion breakpoints in Jacobsen syndrome: Evidence for a common mechanism of chromosome breakage
    • Jones C, Mullenbach R, Grossfeld P, Auer R, Favier R, Chien K, James M, Tunnacliffe A and Cotter F Co-localisation of CCG repeats and chromosome deletion breakpoints in Jacobsen syndrome: evidence for a common mechanism of chromosome breakage Hum Mol Genet 2000, 9:1201-1208
    • (2000) Hum. Mol. Genet. , vol.9 , pp. 1201-1208
    • Jones, C.1    Mullenbach, R.2    Grossfeld, P.3    Auer, R.4    Favier, R.5    Chien, K.6    James, M.7    Tunnacliffe, A.8    Cotter, F.9
  • 15
    • 0035542555 scopus 로고    scopus 로고
    • Transcriptional regulation in the context of chromatin structure
    • Wolffe AP Transcriptional regulation in the context of chromatin structure Essays Biochem 2001, 37:45-57
    • (2001) Essays Biochem. , vol.37 , pp. 45-57
    • Wolffe, A.P.1
  • 17
    • 0033571273 scopus 로고    scopus 로고
    • Chromatin remodelling at the PHO8 promoter requires SWI-SNF and SAGA at a step subsequent to activator binding
    • Gregory PD, Schmid A, Zavari M, Munsterkotter M and Horz W Chromatin remodelling at the PHO8 promoter requires SWI-SNF and SAGA at a step subsequent to activator binding Embo J 1999, 18:6407-6414
    • (1999) Embo J. , vol.18 , pp. 6407-6414
    • Gregory, P.D.1    Schmid, A.2    Zavari, M.3    Munsterkotter, M.4    Horz, W.5
  • 18
    • 0028236523 scopus 로고
    • Transcription: In tune with the histones
    • Wolffe AP Transcription: in tune with the histones Cell 1994, 77:13-16
    • (1994) Cell , vol.77 , pp. 13-16
    • Wolffe, A.P.1
  • 19
    • 0032516090 scopus 로고    scopus 로고
    • Architectural specificity in chromatin structure at the TATA box in vivo: Nucleosome displacement upon beta-phaseolin gene activation
    • Li G, Chandler SP, Wolffe AP and Hall TC Architectural specificity in chromatin structure at the TATA box in vivo: nucleosome displacement upon beta-phaseolin gene activation Proc Natl Acad Sci U S A 1998, 95:4772-4777
    • (1998) Proc. Natl. Acad. Sci. U. S. A. , vol.95 , pp. 4772-4777
    • Li, G.1    Chandler, S.P.2    Wolffe, A.P.3    Hall, T.C.4
  • 21
    • 0027176828 scopus 로고
    • Association of fragile X syndrome with delayed replication of the FMR1 gene
    • Hansen RS, Canfield TK, Lamb MM, Gartler SM and Laird CD Association of fragile X syndrome with delayed replication of the FMR1 gene Cell 1993, 73:1403-1409
    • (1993) Cell , vol.73 , pp. 1403-1409
    • Hansen, R.S.1    Canfield, T.K.2    Lamb, M.M.3    Gartler, S.M.4    Laird, C.D.5
  • 23
    • 0030748045 scopus 로고    scopus 로고
    • Effect of in vitro promoter methylation and CGG repeat expansion on FMR-1 expression
    • Sandberg G and Schalling M Effect of in vitro promoter methylation and CGG repeat expansion on FMR-1 expression Nucleic Acids Res 1997, 25:2883-2887
    • (1997) Nucleic Acids Res. , vol.25 , pp. 2883-2887
    • Sandberg, G.1    Schalling, M.2
  • 24
    • 0029744342 scopus 로고    scopus 로고
    • Nucleosome assembly on methylated CGG triplet repeats in the fragile X mental retardation gene 1 promoter
    • Godde JS, Kass SU, Hirst MC and Wolffe AP Nucleosome assembly on methylated CGG triplet repeats in the fragile X mental retardation gene 1 promoter J Biol Chem 1996, 271:24325-24328
    • (1996) J. Biol. Chem. , vol.271 , pp. 24325-24328
    • Godde, J.S.1    Kass, S.U.2    Hirst, M.C.3    Wolffe, A.P.4
  • 25
    • 0032741429 scopus 로고    scopus 로고
    • Synergistic effect of histone hyperacetylation and DNA demethylation in the reactivation of the FMR1 gene
    • Chiurazzi P, Pomponi MG, Pietrobono R, Bakker CE, Neri G and Oostra BA Synergistic effect of histone hyperacetylation and DNA demethylation in the reactivation of the FMR1 gene Hum Mol Genet 1999, 8:2317-2323
    • (1999) Hum. Mol. Genet. , vol.8 , pp. 2317-2323
    • Chiurazzi, P.1    Pomponi, M.G.2    Pietrobono, R.3    Bakker, C.E.4    Neri, G.5    Oostra, B.A.6
  • 27
    • 0036208153 scopus 로고    scopus 로고
    • Modulation of ISWI function by site-specific histone acetylation
    • Corona DF, Clapier CR, Becker PB and Tamkun JW Modulation of ISWI function by site-specific histone acetylation EMBO Rep 2002, 3:242-247
    • (2002) EMBO Rep. , vol.3 , pp. 242-247
    • Corona, D.F.1    Clapier, C.R.2    Becker, P.B.3    Tamkun, J.W.4
  • 28
    • 0033152745 scopus 로고    scopus 로고
    • The methyl-CpG binding transcriptional repressor MeCP2 stably associates with nucleosomal DNA
    • Chandler SP, Guschin D, Landsberger N and Wolffe AP The methyl-CpG binding transcriptional repressor MeCP2 stably associates with nucleosomal DNA Biochemistry 1999, 38:7008-7018
    • (1999) Biochemistry , vol.38 , pp. 7008-7018
    • Chandler, S.P.1    Guschin, D.2    Landsberger, N.3    Wolffe, A.P.4
  • 29
    • 0032574977 scopus 로고    scopus 로고
    • Transcriptional repression by the methyl-CpGbinding protein MeCP2 involves a histone deacetylase complex
    • Nan X, Ng HH, Johnson CA, Laherty CD, Turner BM, Eisenman RN and Bird A Transcriptional repression by the methyl-CpGbinding protein MeCP2 involves a histone deacetylase complex Nature 1998, 393:386-389
    • (1998) Nature , vol.393 , pp. 386-389
    • Nan, X.1    Ng, H.H.2    Johnson, C.A.3    Laherty, C.D.4    Turner, B.M.5    Eisenman, R.N.6    Bird, A.7
  • 31
    • 0019295352 scopus 로고
    • The nucleotide sequence and transcript map of the herpes simplex virus thymidine kinase gene
    • McKnight SL The nucleotide sequence and transcript map of the herpes simplex virus thymidine kinase gene Nucleic Acids Res 1980, 8:5949-5964
    • (1980) Nucleic Acids Res. , vol.8 , pp. 5949-5964
    • McKnight, S.L.1
  • 32
    • 0032524466 scopus 로고    scopus 로고
    • Cloned human FMR1 trinucleotide repeats exhibit a length- and orientation-dependent instability suggestive of in vivo lagging strand secondary structure
    • Hirst MC and White PJ Cloned human FMR1 trinucleotide repeats exhibit a length- and orientation-dependent instability suggestive of in vivo lagging strand secondary structure Nucleic Acids Res 1998, 26:2353-2358
    • (1998) Nucleic Acids Res. , vol.26 , pp. 2353-2358
    • Hirst, M.C.1    White, P.J.2
  • 33
    • 0032771002 scopus 로고    scopus 로고
    • Stability of the human fragile X (CGG)(n) triplet repeat array in Saccharomyces cerevisiae deficient in aspects of DNA metabolism
    • White PJ, Borts RH and Hirst MC Stability of the human fragile X (CGG)(n) triplet repeat array in Saccharomyces cerevisiae deficient in aspects of DNA metabolism Mol Cell Biol 1999, 19:5675-5684
    • (1999) Mol. Cell Biol. , vol.19 , pp. 5675-5684
    • White, P.J.1    Borts, R.H.2    Hirst, M.C.3
  • 34
    • 0032524466 scopus 로고    scopus 로고
    • Cloned human FMR1 trinucleotide repeats exhibit a length- and orientation-dependent instability suggestive of in vivo lagging strand secondary structure
    • Hirst MC and White PJ Cloned human FMR1 trinucleotide repeats exhibit a length- and orientation-dependent instability suggestive of in vivo lagging strand secondary structure Nucleic Acids Res 1998, 26:2353-2358
    • (1998) Nucleic Acids Res. , vol.26 , pp. 2353-2358
    • Hirst, M.C.1    White, P.J.2
  • 35
    • 0027258499 scopus 로고
    • Nuclear assembly, structure, function: The use of Xenopus in vitro systems
    • Almouzni G and Wolffe AP Nuclear assembly, structure, function: the use of Xenopus in vitro systems Exp Cell Res 1993, 205:1-15
    • (1993) Exp. Cell Res. , vol.205 , pp. 1-15
    • Almouzni, G.1    Wolffe, A.P.2
  • 36
    • 0014351957 scopus 로고
    • Changes in somatic cell nuclei inserted into growing and maturing amphibian oocytes
    • Gurdon JB Changes in somatic cell nuclei inserted into growing and maturing amphibian oocytes J Embryol Exp Morphol 1968, 20:401-414
    • (1968) J. Embryol. Exp. Morphol. , vol.20 , pp. 401-414
    • Gurdon, J.B.1
  • 37
    • 0028860925 scopus 로고
    • A role for nucleosome assembly in both silencing and activation of the Xenopus TR beta A gene by the thyroid hormone receptor
    • Wong J, Shi YB and Wolffe AP A role for nucleosome assembly in both silencing and activation of the Xenopus TR beta A gene by the thyroid hormone receptor Genes Dev 1995, 9:2696-2711
    • (1995) Genes Dev. , vol.9 , pp. 2696-2711
    • Wong, J.1    Shi, Y.B.2    Wolffe, A.P.3
  • 38
    • 0034254668 scopus 로고    scopus 로고
    • Targeting of N-CoR and histone deacetylase 3 by the oncoprotein v-erbA yields a chromatin infrastructure-dependent transcriptional repression pathway
    • Urnov FD, Yee J, Sachs L, Collingwood TN, Bauer A, Beug H, Shi YB and Wolffe AP Targeting of N-CoR and histone deacetylase 3 by the oncoprotein v-erbA yields a chromatin infrastructure-dependent transcriptional repression pathway Embo J 2000, 19:4074-4090
    • (2000) Embo J. , vol.19 , pp. 4074-4090
    • Urnov, F.D.1    Yee, J.2    Sachs, L.3    Collingwood, T.N.4    Bauer, A.5    Beug, H.6    Shi, Y.B.7    Wolffe, A.P.8
  • 39
    • 0025938598 scopus 로고
    • Superhelical stress and nucleosome-mediated repression of 5S RNA gene transcription in vitro
    • Clark DJ and Wolffe AP Superhelical stress and nucleosome-mediated repression of 5S RNA gene transcription in vitro Embo J 1991, 10:3419-3428
    • (1991) Embo J. , vol.10 , pp. 3419-3428
    • Clark, D.J.1    Wolffe, A.P.2
  • 40
    • 0027495603 scopus 로고
    • Effect of positive supercoiling on DNA compaction by nucleosome cores
    • Clark DJ, Ghirlando R, Felsenfeld G and Eisenberg H Effect of positive supercoiling on DNA compaction by nucleosome cores J Mol Biol 1993, 234:297-301
    • (1993) J. Mol. Biol. , vol.234 , pp. 297-301
    • Clark, D.J.1    Ghirlando, R.2    Felsenfeld, G.3    Eisenberg, H.4
  • 41
    • 0035827629 scopus 로고    scopus 로고
    • An array of positioned nucleosomes potentiates thyroid hormone receptor action in vivo
    • Urnov FD and Wolffe AP An array of positioned nucleosomes potentiates thyroid hormone receptor action in vivo J Biol Chem 2001, 276:19753-19761
    • (2001) J. Biol. Chem. , vol.276 , pp. 19753-19761
    • Urnov, F.D.1    Wolffe, A.P.2
  • 42
    • 0030668366 scopus 로고    scopus 로고
    • Structural and functional characterization of the human FMR1 prooter reveals similarities with the hnRNP-A2 promoter region
    • Drouin R, Angers M, Dallaire N, Rose TM, Khandjian W and Rousseau F Structural and functional characterization of the human FMR1 prooter reveals similarities with the hnRNP-A2 promoter region Hum Mol Genet 1997, 6:2051-2060
    • (1997) Hum. Mol. Genet. , vol.6 , pp. 2051-2060
    • Drouin, R.1    Angers, M.2    Dallaire, N.3    Rose, T.M.4    Khandjian, W.5    Rousseau, F.6
  • 44
    • 0034684031 scopus 로고    scopus 로고
    • Fragile X males with unmethylated, full mutation trinucleotide repeat expansions have elevated levels of FMR1 messenger RNA
    • Tassone F, Hagerman RJ, Loesch DZ, Lachiewicz A, Taylor AK and Hagerman PJ Fragile X males with unmethylated, full mutation trinucleotide repeat expansions have elevated levels of FMR1 messenger RNA Am J Med Genet 2000, 94:232-236
    • (2000) Am. J. Med. Genet. , vol.94 , pp. 232-236
    • Tassone, F.1    Hagerman, R.J.2    Loesch, D.Z.3    Lachiewicz, A.4    Taylor, A.K.5    Hagerman, P.J.6
  • 45
    • 0031104930 scopus 로고    scopus 로고
    • DNA methylation directs a time-dependent repression of transcription initiation
    • Kass SU, Landsberger N and Wolffe AP DNA methylation directs a time-dependent repression of transcription initiation Curr Biol 1997, 7:157-165
    • (1997) Curr. Biol. , vol.7 , pp. 157-165
    • Kass, S.U.1    Landsberger, N.2    Wolffe, A.P.3
  • 46
    • 0035830879 scopus 로고    scopus 로고
    • Interaction of the transcription factors USF1, USF2, alpha -Pal/Nrf-1 with the FMR1 promoter. Implications for Fragile X mental retardation syndrome
    • Kumari D and Usdin K Interaction of the transcription factors USF1, USF2, alpha -Pal/Nrf-1 with the FMR1 promoter. Implications for Fragile X mental retardation syndrome J Biol Chem 2001, 276:4357-4364
    • (2001) J. Biol. Chem. , vol.276 , pp. 4357-4364
    • Kumari, D.1    Usdin, K.2
  • 47
    • 0030824177 scopus 로고    scopus 로고
    • Deletion of all CGG repeats plus flanking sequences in FMR1 does not abolish gene expression
    • Gronskov K, Hjalgrim H, Bjerager MO and Brondum-Nielsen K Deletion of all CGG repeats plus flanking sequences in FMR1 does not abolish gene expression Am J Hum Genet 1997, 61:961-967
    • (1997) Am. J. Hum. Genet. , vol.61 , pp. 961-967
    • Gronskov, K.1    Hjalgrim, H.2    Bjerager, M.O.3    Brondum-Nielsen, K.4
  • 50
    • 0025294471 scopus 로고
    • CpG methylation inhibits proenkephalin gene expression and binding of the transcription factor AP-2
    • Comb M and Goodman HM CpG methylation inhibits proenkephalin gene expression and binding of the transcription factor AP-2 Nucleic Acids Res 1990, 18:3975-3982
    • (1990) Nucleic Acids Res. , vol.18 , pp. 3975-3982
    • Comb, M.1    Goodman, H.M.2
  • 51
    • 0025981492 scopus 로고
    • Interference with protein binding at AP2 sites by sequence-specific methylation in the late E2A promoter of adenovirus type 2 DNA
    • Hermann R and Doerfler W Interference with protein binding at AP2 sites by sequence-specific methylation in the late E2A promoter of adenovirus type 2 DNA FEBS Lett 1991, 281:191-195
    • (1991) FEBS Lett. , vol.281 , pp. 191-195
    • Hermann, R.1    Doerfler, W.2
  • 53
    • 0030785355 scopus 로고    scopus 로고
    • Epigenetic variation illustrated by DNA methylation patterns of the fragile-X gene FMR1
    • Stoger R, Kajimura TM, Brown WT and Laird CD Epigenetic variation illustrated by DNA methylation patterns of the fragile-X gene FMR1 Hum Mol Genet 1997, 6:1791-1801
    • (1997) Hum. Mol. Genet. , vol.6 , pp. 1791-1801
    • Stoger, R.1    Kajimura, T.M.2    Brown, W.T.3    Laird, C.D.4
  • 55
    • 0030923656 scopus 로고    scopus 로고
    • FMR1 fully expanded mutation with minimal methylation in a high functioning fragile X male
    • Loesch DZ FMR1 fully expanded mutation with minimal methylation in a high functioning fragile X male J Med Genet 1997, 34:350
    • (1997) J. Med. Genet. , vol.34 , pp. 350
    • Loesch, D.Z.1
  • 56
    • 0030049441 scopus 로고    scopus 로고
    • Purification of nuclear proteins from human HeLa cells that bind specifically to the unstable tandem repeat (CGG)n in the human FMR1 gene
    • Deissler H, Behn-Krappa A and Doerfler W Purification of nuclear proteins from human HeLa cells that bind specifically to the unstable tandem repeat (CGG)n in the human FMR1 gene J Biol Chem 1996, 271:4327-4334
    • (1996) J. Biol. Chem. , vol.271 , pp. 4327-4334
    • Deissler, H.1    Behn-Krappa, A.2    Doerfler, W.3
  • 57
    • 0030836588 scopus 로고    scopus 로고
    • Rapid protein sequencing by tandem mass spectrometry and cDNA cloning of p20-CGGBP. A novel protein that binds to the unstable triplet repeat 5′-d(CGG)n-3′ in the human FMR1 gene
    • Deissler H, Wilm M, Genc B, Schmitz B, Ternes T, Naumann F, Mann M and Doerfler W Rapid protein sequencing by tandem mass spectrometry and cDNA cloning of p20-CGGBP. A novel protein that binds to the unstable triplet repeat 5′-d(CGG)n-3′ in the human FMR1 gene J Biol Chem 1997, 272:16761-16768
    • (1997) J. Biol. Chem. , vol.272 , pp. 16761-16768
    • Deissler, H.1    Wilm, M.2    Genc, B.3    Schmitz, B.4    Ternes, T.5    Naumann, F.6    Mann, M.7    Doerfler, W.8
  • 58
    • 0343415658 scopus 로고    scopus 로고
    • The human 20-kDa 5′-(CGG)(n)-3′-binding protein is targeted to the nucleus and affects the activity of the FMR1 promoter
    • Muller-Hartmann H, Deissler H, Naumann F, Schmitz B, Schroer J and Doerfler W The human 20-kDa 5′-(CGG)(n)-3′-binding protein is targeted to the nucleus and affects the activity of the FMR1 promoter J Biol Chem 2000, 275:6447-6452
    • (2000) J. Biol. Chem. , vol.275 , pp. 6447-6452
    • Muller-Hartmann, H.1    Deissler, H.2    Naumann, F.3    Schmitz, B.4    Schroer, J.5    Doerfler, W.6
  • 59
    • 0028148342 scopus 로고
    • Hyper-methylation of telomere-like foldbacks at codon 12 of the human c-Ha-ras gene and the trinucleotide repeat of the FMR-1 gene of fragile X
    • Smith SS, Laayoun A, Lingeman RG, Baker DJ and Riley J Hyper-methylation of telomere-like foldbacks at codon 12 of the human c-Ha-ras gene and the trinucleotide repeat of the FMR-1 gene of fragile X J Mol Biol 1994, 243:143-151
    • (1994) J. Mol. Biol. , vol.243 , pp. 143-151
    • Smith, S.S.1    Laayoun, A.2    Lingeman, R.G.3    Baker, D.J.4    Riley, J.5
  • 63
    • 0032905253 scopus 로고    scopus 로고
    • Acetylated histones are associated with FMR1 in normal but not fragile X-syndrome cells
    • Coffee B, Zhang F, Warren ST and Reines D Acetylated histones are associated with FMR1 in normal but not fragile X-syndrome cells Nat Genet 1999, 22:98-101
    • (1999) Nat. Genet. , vol.22 , pp. 98-101
    • Coffee, B.1    Zhang, F.2    Warren, S.T.3    Reines, D.4
  • 64
    • 0029785841 scopus 로고    scopus 로고
    • Moderate increase in histone acetylation activates the mouse mammary tumor virus promoter and remodels its nucleosome structure
    • Bartsch J, Truss M, Bode J and Beato M Moderate increase in histone acetylation activates the mouse mammary tumor virus promoter and remodels its nucleosome structure Proc Natl Acad Sci USA 1996, 93(20):10741-10746
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , Issue.20 , pp. 10741-10746
    • Bartsch, J.1    Truss, M.2    Bode, J.3    Beato, M.4
  • 65
    • 0037333573 scopus 로고    scopus 로고
    • Glial Cell-Specific Regulation of the JC Virus Early Promoter by Histone Deacetylase Inhibitors
    • Kim SY, Woo MS, Kim WK, Choi EC, Henson JW and Kim HS Glial Cell-Specific Regulation of the JC Virus Early Promoter by Histone Deacetylase Inhibitors J Virol 2003, 77(6):3394-3401
    • (2003) J. Virol. , vol.77 , Issue.6 , pp. 3394-3401
    • Kim, S.Y.1    Woo, M.S.2    Kim, W.K.3    Choi, E.C.4    Henson, J.W.5    Kim, H.S.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.