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Volumn 37, Issue 3, 2003, Pages 325-333

Alu Repeats in the Human Genome

Author keywords

7SL RNA; Alu repeat; Evolution; Retroposition

Indexed keywords

MONOMER; RNA POLYMERASE;

EID: 0037786818     PISSN: 00268933     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1024218806634     Document Type: Review
Times cited : (4)

References (61)
  • 1
    • 0014012579 scopus 로고
    • Nucleotide sequence repetition: A rapidly reassociating fraction of mouse DNA
    • Waring M., Britten R.J. 1966. Nucleotide sequence repetition: a rapidly reassociating fraction of mouse DNA. Science. 154, 791-794.
    • (1966) Science , vol.154 , pp. 791-794
    • Waring, M.1    Britten, R.J.2
  • 2
    • 0030479536 scopus 로고    scopus 로고
    • The origin of interspersed repeats in the human genome
    • Smit A.F. 1996. The origin of interspersed repeats in the human genome. Current Opin. Genet. Develop. 6, 743-748.
    • (1996) Current Opin. Genet. Develop. , vol.6 , pp. 743-748
    • Smit, A.F.1
  • 3
    • 2042437650 scopus 로고    scopus 로고
    • Initial sequencing and analysis of the human genome
    • International Human Genome Sequencing Consortium. 2001. Initial sequencing and analysis of the human genome. Nature. 409, 860-921.
    • (2001) Nature , vol.409 , pp. 860-921
  • 4
  • 6
    • 0028804572 scopus 로고
    • MIRs are classic, tRNA-derived SINEs that amplified before the mammalian radiation
    • Smit A.F., Riggs A.D. 1995. MIRs are classic, tRNA-derived SINEs that amplified before the mammalian radiation. Nucleic Acids Res. 23, 98-102.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 98-102
    • Smit, A.F.1    Riggs, A.D.2
  • 7
    • 0021127698 scopus 로고
    • Alu sequences are processed 7SL RNA genes
    • Ullu E., Tschudi C. 1984. Alu sequences are processed 7SL RNA genes. Nature. 312, 171-172.
    • (1984) Nature , vol.312 , pp. 171-172
    • Ullu, E.1    Tschudi, C.2
  • 8
    • 0026749958 scopus 로고
    • Origin of the Alu family: A family of Alu-like monomers gave birth to the left and the right arms of the Alu elements
    • Quentin Y. 1992. Origin of the Alu family: a family of Alu-like monomers gave birth to the left and the right arms of the Alu elements. Nucleic Acids Res. 20(13), 3397-3401.
    • (1992) Nucleic Acids Res. , vol.20 , Issue.13 , pp. 3397-3401
    • Quentin, Y.1
  • 10
    • 0025246222 scopus 로고
    • The polydeoxyadenylate tract of Alu repetitive elements is polymorphic in the human genome
    • Economou E.P., Bergen A.W., Warren A.C., Antonarakis S.E. 1990. The polydeoxyadenylate tract of Alu repetitive elements is polymorphic in the human genome. Proc. Natl. Acad. Sci. USA. 87, 2951-2954.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 2951-2954
    • Economou, E.P.1    Bergen, A.W.2    Warren, A.C.3    Antonarakis, S.E.4
  • 11
    • 0026049457 scopus 로고
    • Free left arms as precursor molecules in the evolution of Alu sequences
    • Jurka J., Zuckerkandl E. 1991. Free left arms as precursor molecules in the evolution of Alu sequences. J. Mol. Evol. 33, 49-56.
    • (1991) J. Mol. Evol. , vol.33 , pp. 49-56
    • Jurka, J.1    Zuckerkandl, E.2
  • 14
    • 0037022569 scopus 로고    scopus 로고
    • Genes, pseudogenes, and Alu sequence organization across human chromosomes 21 and 22
    • Chen C., Gentles A.J., Jurka J., Karlin S. 2002. Genes, pseudogenes, and Alu sequence organization across human chromosomes 21 and 22. Proc. Natl. Acad. Sci. USA. 99, 2930-2935.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 2930-2935
    • Chen, C.1    Gentles, A.J.2    Jurka, J.3    Karlin, S.4
  • 17
    • 0027304778 scopus 로고
    • Sequential insertion of Alu family repeats into specific genomic sites of higher primates
    • Bailey A.D., Shen C.K. 1993. Sequential insertion of Alu family repeats into specific genomic sites of higher primates. Proc. Natl. Acad. Sci. USA. 90, 7205-7209.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 7205-7209
    • Bailey, A.D.1    Shen, C.K.2
  • 19
    • 0031593158 scopus 로고    scopus 로고
    • Alu elements as an aid in deciphering genome rearrangements
    • Toda Y., Tomita M., 1997. Alu elements as an aid in deciphering genome rearrangements. Gene. 205, 173-176.
    • (1997) Gene , vol.205 , pp. 173-176
    • Toda, Y.1    Tomita, M.2
  • 22
    • 0019869111 scopus 로고
    • Short interspersed repetitive DNA elements in eucaryotes: Transposable DNA elements generated by reverse transcription of RNA pol III transcripts?
    • Jagadeeswaran P., Forget B.G., Weissman S.M. 1981. Short interspersed repetitive DNA elements in eucaryotes: transposable DNA elements generated by reverse transcription of RNA pol III transcripts? Cell. 26, 141-142.
    • (1981) Cell , vol.26 , pp. 141-142
    • Jagadeeswaran, P.1    Forget, B.G.2    Weissman, S.M.3
  • 23
    • 0030331832 scopus 로고    scopus 로고
    • Integration of retroposable elements in mammals: Selection of target sites
    • Jurka J., Klonowski P. 1996. Integration of retroposable elements in mammals: selection of target sites [letter]. J. Mol. Evol. 43, 685-689.
    • (1996) J. Mol. Evol. , vol.43 , pp. 685-689
    • Jurka, J.1    Klonowski, P.2
  • 24
    • 0031055331 scopus 로고    scopus 로고
    • Sequence patterns indicate an enzymatic involvement in the integration of mammalian retroposons
    • Jurka J. 1997. Sequence patterns indicate an enzymatic involvement in the integration of mammalian retroposons. Proc. Natl. Acad. Sci. USA. 94, 1872-1877.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 1872-1877
    • Jurka, J.1
  • 25
    • 0029153564 scopus 로고
    • The consensus sequence of a major Alu subfamily contains a functional retinoic acid response element
    • Vansant G., Reynolds W.F. 1995. The consensus sequence of a major Alu subfamily contains a functional retinoic acid response element. Proc. Natl. Acad. Sci. USA. 92, 8229-8233.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 8229-8233
    • Vansant, G.1    Reynolds, W.F.2
  • 26
    • 0031593249 scopus 로고    scopus 로고
    • Mobile elements inserted in the distant past have taken of important functions
    • Britten R.J. 1997. Mobile elements inserted in the distant past have taken of important functions. Gene. 205, 177-182.
    • (1997) Gene , vol.205 , pp. 177-182
    • Britten, R.J.1
  • 28
    • 0028951144 scopus 로고
    • Nucleosome positioning by human Alu elements in chromatin
    • Englander E.W., Howard B.H. 1995. Nucleosome positioning by human Alu elements in chromatin. J. Biol. Chem. 270, 10091-10096.
    • (1995) J. Biol. Chem. , vol.270 , pp. 10091-10096
    • Englander, E.W.1    Howard, B.H.2
  • 29
    • 0029050539 scopus 로고
    • Chromosomal insertion of foreign (adenovirus type 12, plasmid, or bacteriophage lambda) DNA is associated with enhanced methylation of cellular DNA segments
    • Heller H., Kammer C., Wilgenbus P., Doerfler W. 1995. Chromosomal insertion of foreign (adenovirus type 12, plasmid, or bacteriophage lambda) DNA is associated with enhanced methylation of cellular DNA segments. Proc. Natl. Acad. Sci. USA. 92, 5515-5519.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 5515-5519
    • Heller, H.1    Kammer, C.2    Wilgenbus, P.3    Doerfler, W.4
  • 30
    • 0032481623 scopus 로고    scopus 로고
    • Isolation of an Alu repetitive DNA binding protein and effect of CpG methylation of binding to its recognition sequence
    • Cox G.S., Gutkin D.W., Haas M.J., Cosgrove D.E. 1998. Isolation of an Alu repetitive DNA binding protein and effect of CpG methylation of binding to its recognition sequence. Biochim. Biophys. Acta. 1396, 67-87.
    • (1998) Biochim. Biophys. Acta , vol.1396 , pp. 67-87
    • Cox, G.S.1    Gutkin, D.W.2    Haas, M.J.3    Cosgrove, D.E.4
  • 31
    • 0028915909 scopus 로고
    • Repetitive Alu elements form a cruciform structure that regulates the function of the human CD8 alpha T cell-specific enhancer
    • Hanke J.H., Hambor J.E., Kavathas P. 1995. Repetitive Alu elements form a cruciform structure that regulates the function of the human CD8 alpha T cell-specific enhancer. J. Mol. Biol. 246, 63-73.
    • (1995) J. Mol. Biol. , vol.246 , pp. 63-73
    • Hanke, J.H.1    Hambor, J.E.2    Kavathas, P.3
  • 35
    • 0025272785 scopus 로고
    • Polyadenylation signal of the mouse thymidylate synthase gene was created by insertion of an L1 repetitive element downstream of the open reading frame
    • Harendza C.J., Johnson L.F. 1990. Polyadenylation signal of the mouse thymidylate synthase gene was created by insertion of an L1 repetitive element downstream of the open reading frame. Proc. Natl. Acad. Sci. USA. 87, 2531-2535.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 2531-2535
    • Harendza, C.J.1    Johnson, L.F.2
  • 36
    • 0029685023 scopus 로고    scopus 로고
    • Alu structure, origin, evolution, significance, and function of one-tenth of human DNA
    • Schmid C.W. 1996. Alu structure, origin, evolution, significance, and function of one-tenth of human DNA. Progr. Nucleic Acids Res. Mol. Biol. 53, 283-319.
    • (1996) Progr. Nucleic Acids Res. Mol. Biol. , vol.53 , pp. 283-319
    • Schmid, C.W.1
  • 37
    • 0031465285 scopus 로고    scopus 로고
    • Exon 2 of human cathepsin B derives from an Alu element
    • Berquin I.M., Ahram M., Sloane B.F. 1997. Exon 2 of human cathepsin B derives from an Alu element. FEBS Lett. 419, 121-123.
    • (1997) FEBS Lett. , vol.419 , pp. 121-123
    • Berquin, I.M.1    Ahram, M.2    Sloane, B.F.3
  • 39
    • 0031622681 scopus 로고    scopus 로고
    • Retrotransposal integration of mobile genetic elements in human diseases
    • Miki Y. 1998. Retrotransposal integration of mobile genetic elements in human diseases. J. Hum. Genet. 43, 77-84.
    • (1998) J. Hum. Genet. , vol.43 , pp. 77-84
    • Miki, Y.1
  • 41
    • 0026322613 scopus 로고
    • Inactivation of the cholinesterase gene by Alu insertion: Possible mechanism for human genetransposition
    • Muratani K. 1991. Inactivation of the cholinesterase gene by Alu insertion: Possible mechanism for human genetransposition. Proc. Natl. Acad. Sci. USA. 88, 11315-11319.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 11315-11319
    • Muratani, K.1
  • 42
    • 0030045979 scopus 로고    scopus 로고
    • The age of Alu subfamilies
    • Kapitonov V., Jurka J. 1996. The age of Alu subfamilies. J. Mol. Evol. 42, 59-65.
    • (1996) J. Mol. Evol. , vol.42 , pp. 59-65
    • Kapitonov, V.1    Jurka, J.2
  • 43
    • 0036300478 scopus 로고    scopus 로고
    • Non-traditional Alu evolution and primate genomic diversity
    • Roy-Engel A.M. 2002. Non-traditional Alu evolution and primate genomic diversity. J. Mol. Biol. 316, 1033-1040.
    • (2002) J. Mol. Biol. , vol.316 , pp. 1033-1040
    • Roy-Engel, A.M.1
  • 45
    • 0025736539 scopus 로고
    • Reconstruction and analysis of human Alu genes
    • Jurka J., Milosavljevic A. 1991. Reconstruction and analysis of human Alu genes. J. Mol. Evol. 32, 105-121.
    • (1991) J. Mol. Evol. , vol.32 , pp. 105-121
    • Jurka, J.1    Milosavljevic, A.2
  • 47
    • 0028340205 scopus 로고
    • Evidence that most human Alu sequences were inserted in a process that ceased about 30 million years ago
    • Britten R.J. 1994. Evidence that most human Alu sequences were inserted in a process that ceased about 30 million years ago. Proc. Natl. Acad. Sci. USA. 91, 6148-6150.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 6148-6150
    • Britten, R.J.1
  • 48
    • 0030045978 scopus 로고    scopus 로고
    • The role and amplification of the HS Alu subfamily founder gene
    • Shaikh T.H., Deininger P.L. 1996. The role and amplification of the HS Alu subfamily founder gene. J. Mol. Evol. 42, 15-21.
    • (1996) J. Mol. Evol. , vol.42 , pp. 15-21
    • Shaikh, T.H.1    Deininger, P.L.2
  • 50
    • 0033787169 scopus 로고    scopus 로고
    • Potential gene conversion and source genes for recentrly integrated Alu elements
    • Roy A.M. 2000. Potential gene conversion and source genes for recentrly integrated Alu elements. Genome Res. 10, 1485-1595.
    • (2000) Genome Res. , vol.10 , pp. 1485-1595
    • Roy, A.M.1
  • 53
    • 0033019117 scopus 로고    scopus 로고
    • Origin and phylogenetic distribution of Alu DNA repats: Irreversible events in the evolution of primates
    • Hamdi H., Nishio H., Zielinski R., Dugiczy A. 1999. Origin and phylogenetic distribution of Alu DNA repats: Irreversible events in the evolution of primates. J. Mol. Biol. 289, 861-871.
    • (1999) J. Mol. Biol. , vol.289 , pp. 861-871
    • Hamdi, H.1    Nishio, H.2    Zielinski, R.3    Dugiczy, A.4
  • 57
    • 0032977064 scopus 로고    scopus 로고
    • Human-specific insertion/deletion polymorphisms in Indian populations and their evolutionary implications
    • Majumber P.P. 1999. Human-specific insertion/deletion polymorphisms in Indian populations and their evolutionary implications. Eur. J. Hum. Genet. 7, 435-446.
    • (1999) Eur. J. Hum. Genet. , vol.7 , pp. 435-446
    • Majumber, P.P.1
  • 58
    • 0035320143 scopus 로고    scopus 로고
    • Genetic differentiation of the Tuvinian population as inferred from polymorphic Alu insertions
    • Stepanov V.A., Khitrinskaya I.Yu., Puzyrev V.P. 2001. Genetic differentiation of the Tuvinian population as inferred from polymorphic Alu insertions. Genetika. 37, 563-569.
    • (2001) Genetika , vol.37 , pp. 563-569
    • Stepanov, V.A.1    Khitrinskaya, I.Yu.2    Puzyrev, V.P.3
  • 59
    • 0035514079 scopus 로고    scopus 로고
    • Analysis of the polymorphic Alu insertions in Buryat populations
    • Khitrinskaya I.Yu., Stepanov V.A., Puzyrev V.P. 2001. Analysis of the polymorphic Alu insertions in Buryat populations. Genetika. 37, 1553-1558.
    • (2001) Genetika , vol.37 , pp. 1553-1558
    • Khitrinskaya, I.Yu.1    Stepanov, V.A.2    Puzyrev, V.P.3
  • 61
    • 17444444686 scopus 로고    scopus 로고
    • Analysis of polymorphic Alu insertions in the urban and rural Russian populations of Siberia
    • Stepanov V.A., Puzyrev V.P., Spiridonova M.G., Khitrinskaya I.Yu. 1999. Analysis of polymorphic Alu insertions in the urban and rural Russian populations of Siberia. Genetika. 35, 1138-1143.
    • (1999) Genetika , vol.35 , pp. 1138-1143
    • Stepanov, V.A.1    Puzyrev, V.P.2    Spiridonova, M.G.3    Khitrinskaya, I.Yu.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.