DNA sequences of Alu elements indicate a recent replacement of the human autosomal genetic complement

Proceedings of the National Academy of Sciences of the United States of America

Volumn 93, Issue 9, 1996, Pages 4360-4364

  Knight, Alec ^a,h   Batzer, Mark A ^b,d   Stoneking, Mark ^e   Tiwari, Hemant K ^c   Scheer, W Douglas ^b   Herrera, Rene J ^f   Deininger, Prescott L ^a,g  

^a Dept of Biochem and Molec Biology   (United States)

^b LOUISIANA STATE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^c LOUISIANA STATE UNIV MEDICAL CENTER   (United States)

^d LAWRENCE LIVERMORE NATIONAL LABORATORY   (United States)

^e PENNSYLVANIA STATE UNIVERSITY   (United States)

^f FLORIDA INTERNATIONAL UNIVERSITY   (United States)

^g OCHSNER MEDICAL CENTER   (United States)

^h SUL ROSS STATE UNIVERSITY   (United States)

Author keywords

evolution; nuclear alleles; nucleotide diversity; population genetics

Indexed keywords

MITOCHONDRIAL DNA;

ALLELE; ARTICLE; AUTOSOME; CLINICAL ARTICLE; DNA SEQUENCE; EVOLUTION; GENETIC VARIABILITY; HUMAN; HUMAN CELL; POLYMERASE CHAIN REACTION; POPULATION GENETICS; PRIORITY JOURNAL; Y CHROMOSOME;

ALLELES; ANIMALS; APOLIPOPROTEINS; BASE SEQUENCE; CONTINENTAL POPULATION GROUPS; DNA; DNA PRIMERS; ETHNIC GROUPS; EVOLUTION; GENE FREQUENCY; GLOBINS; GORILLA GORILLA; HOMINIDAE; HUMANS; MOLECULAR SEQUENCE DATA; PAN TROGLODYTES; PEPTIDYL-DIPEPTIDASE A; POLYMERASE CHAIN REACTION; POLYMORPHISM, GENETIC; PONGO PYGMAEUS; REPETITIVE SEQUENCES, NUCLEIC ACID; SEQUENCE HOMOLOGY, NUCLEIC ACID;

HOMINOIDEA;

EID: 0029864160     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.93.9.4360     Document Type: Article

References (47)

1. Valladas, H., Reyss, J. L., Joron, J. L., Valladas, G., Bar-Yosef, O. & Vandermeersch, B. (1988) Nature (London) 331, 614-616.
2. Mellars, P. & Stringer, C., eds. (1989) The Human Revolution (Princeton Univ. Press, Princeton, NJ).
3. Brown, W. M. (1980) Proc. Natl. Acad. Sci. USA 77, 3605-3609.
4. Cann, R. L., Stoneking, M. & Wilson, A.C. (1987) Nature (London) 325, 31-36.
5. Vigilant, L., Stoneking, M., Harpending, H., Hawkes, K. & Wilson, A. C. (1991) Science 253, 1503-1507.
6. Howells, W. W. (1976) J. Hum. Evol. 5, 477-495.
7. Wolpoff, M. H. (1989) in The Human Revolution, eds. Mellars, P. & Stringer, C. (Princeton Univ. Press, Princeton, NJ), pp. 62-108.
8. Powell, J. R. (1983) Proc. Natl. Acad. Sci. USA 80, 492-495.
9. Ferris, S. D., Sage, R. D., Huang, C.-M., Nielsen, J. T., Ritte, U. & Wilson, A. C. (1983) Proc. Natl. Acad. Sci. USA 80, 2290-2294.
10. Spolsky, C. & Uzell, T. (1984) Proc. Natl. Acad. Sci. USA 81, 5802-5805.
11. Carr, S. M., Ballinger, S. W., Derr, J. N., Blankenship, L. H. & Bickham, J. W. (1986) Proc. Natl. Acad. Sci. USA 83, 9576-9580.
12. Gyllensten, U. & Wilson, A. C. (1987) Genet. Res. 49, 25-29.
13. Tegelström, H. (1987) J. Mol. Evol. 24, 218-227.
14. Aubert, J. & Solinac, M. (1990) Evolution 44, 1272-1282.
15. Kraus, F. & Miyamoto, M. M. (1990) Proc. Natl. Acad. Sci. USA 87, 2235-2238.
16. Knight, A., Densmore, L. D. & Rael, E. D. (1992) in Biology of the Pitvipers, eds. Campbell, J. A. & Brodie, E. D., Jr. (Selva, Tyler, TX), pp. 49-70.
17. Nei, M. & Livshits, G. (1989) Hum. Hered. 39, 276-281.
18. Livshits, G. & Nei, M. (1990) Ann. Hum. Biol. 17, 501-513.
19. Anderson, S., Bankier, A. T., Barrell, B. G., de Bruijn, M. H. L., Coulson, A. R., Drouin, J., Eperon, I. C., Nierlich, D. P., Roe, B. A., Sanger, F., Schreier, P. H., Smith, A. J. H., Staden, R. & Young, I. G. (1981) Nature (London) 290, 457-465.
20. Brown, W. M. (1985) in Molecular Evolutionary Genetics, ed. MacIntyre, R. J. (Plenum, New York), pp. 95-130.
21. Lewin, B. M. (1980) Gene Expression (Wiley, New York).
22. Dorit, R. L., Akashi, H. & Gilbert, W. (1995) Science 268, 1183-1185.
23. Bowcock, A. M., Kidd, J. R., Mountain, J. L., Hebert, J. M., Carotenuto, L., Kidd, K. & Cavalli-Sforza, L. L. (1991) Proc. Natl. Acad. Sci. USA 88, 839-843.
24. Li, W.-H. & Sadler, L. A. (1991) Genetics 129, 513-523.
25. Fullerton, S. M., Harding, R. M., Boyce, A. J. & Clegg, J. B. (1994) Proc. Natl. Acad. Sci. USA 91, 1805-1809.
26. Kurth, J. H., Mountain, J. L. & Cavalli-Sforza, L. L. (1993) Genomics 16, 69-77.
27. Kurth, J. H. & Cavalli-Sforza, L. L. (1994) Am. J. Hum. Genet. 54, 1037-1041.
28. Schmid, C. W. & Shen, C.-K. (1985) in Molecular Evolutionary Genetics, ed. MacIntyre, R. J. (Plenum, New York), pp. 323-358.
29. Deininger, P. L. (1989) in Mobile DNA, eds. Howe, M. M. & Berg, D. E. (Am. Soc. Microbiol., Washington, DC), pp. 619-636.
30. Deininger, P. L. & Batzer, M. A. (1993) Evol. Biol. 27, 157-196.
31. Sawada, I., Willard, C., Shen, C.-K. J., Chapman, B., Wilson, A. C. & Schmid, C. W. (1985) J. Mol. Evol. 22, 316-322.
32. Gonzalez, I. L., Peterson, R. & Sylvester, J. E. (1989) Mol. Biol. Evol. 6, 413-423.
33. Swisher, C. C., III, Curtis, G. H., Jacob, T., Getty, A. G., Suprijo, A. & Widiasmoro (1994) Science 263, 1118-1121.
34. Gabunia, L. & Vekua, A. (1995) Nature (London) 373, 509-512.
35. Li, W.-H. & Graur, D. (1991) Fundamentals of Molecular Evolution (Sinauer, Sunderland, MA).
36. Tiret, L., Rigat, B., Visvikis, S., Breda, C., Corvol, P., Cambien, F. & Soubrier, F. (1992) Am. J. Hum. Genet. 51, 197-205.
37. Antanorakis, S. E., Oettgen, P., Chakravarti, S. L., Halloran, S. L., Hudson, R. R., Feisee, L. & Karathanasis, S. K. (1988) Hum. Genet. 80, 265-273.
38. Batzer, M. A., Stoneking, M., Alegria-Hartman, M., Bazan, H., Kass, D. H., Shaikh, T. H., Novick, G. E., Ioannou, P. A., Scheer, W. D., Herrera, R. J. & Deininger, P. L. (1994) Proc. Natl. Acad. Sci. USA 91, 12288-12292.
39. Carothers, A. M., Urlaub, G., Mucha, J., Grunberger, D. & Chasin, L. A. (1989) BioTechniques 7, 494-499.
40. Saluz, H. & Jost, J.-P. (1989) Proc. Natl. Acad. Sci. USA 86, 2602-2606.
41. Nei, M. & Li, W.-H. (1979) Proc. Natl. Acad. Sci. USA 76, 5269-5273.
42. Mindell, D. P. & Honeycutt, R. L. (1990) Annu. Rev. Ecol. Syst. 21, 541-566.
43. Kimura, M. (1980) J. Mol. Evol. 16, 111-120.
44. Horai, S. (1993) J. Mol. Evol. 35, 32-43.
45. Bailey, W. J., Hayasaka, K., Skinner, C. G., Kehoe, S., Sieu, L. C., Slightom, J. L. & Goodman, M. (1992) Mol. Phylogenet. Evol. 1, 97-135.
46. Stoneking, M. (1993) Evol. Anthropol. 2, 60-73.
47. Takahata, N. (1993) Mol. Biol. Evol. 10, 2-22.