-
1
-
-
12944267048
-
Identification of the SAAT gene involved in strawberry flavor biogenesis by use of DNA microarrays
-
Aharoni,A., Keizer,L.C., Bouwmeester,H.J., Sun,Z., Alvarez-Huerta,M., Verhoeven,H.A., Blaas,J., van Houwelingen,A.M, De Vos,R.C., van der Voet,H.et al. (2000) Identification of the SAAT gene involved in strawberry flavor biogenesis by use of DNA microarrays. Plant Cell, 12, 647-661.
-
(2000)
Plant Cell
, vol.12
, pp. 647-661
-
-
Aharoni, A.1
Keizer, L.C.2
Bouwmeester, H.J.3
Sun, Z.4
Alvarez-Huerta, M.5
Verhoeven, H.A.6
Blaas, J.7
van Houwelingen, A.M.8
De Vos, R.C.9
van der Voet, H.10
-
2
-
-
0036083657
-
Global gene expression profiling of end-stage dilated cardiomyopathy using a human cardiovascular-based cDNA microarray
-
Barrans,J.D., Allen,P.D., Stamatiou,D., Dzau,VJ. and Liew,C. (2002) Global gene expression profiling of end-stage dilated cardiomyopathy using a human cardiovascular-based cDNA microarray. Am. J. Pathol., 160, 2035-2043.
-
(2002)
Am. J. Pathol.
, vol.160
, pp. 2035-2043
-
-
Barrans, J.D.1
Allen, P.D.2
Stamatiou, D.3
Dzau, V.J.4
Liew, C.5
-
3
-
-
0037096870
-
Parallel analysis of sporadic primary ovarian carcinomas by spectral karyotyping, comparative genomic hybridization, and expression microarrays
-
Bayani,J., Brenton,J.D., Macgregor,P.F., Beheshti,B., Albert,M., Nallainathan,D., Karaskova,J., Rosen,B., Murphy,J., Laframboise,S. et al. (2002) Parallel analysis of sporadic primary ovarian carcinomas by spectral karyotyping, comparative genomic hybridization, and expression microarrays. Cancer Res., 62, 3466-3476.
-
(2002)
Cancer Res.
, vol.62
, pp. 3466-3476
-
-
Bayani, J.1
Brenton, J.D.2
Macgregor, P.F.3
Beheshti, B.4
Albert, M.5
Nallainathan, D.6
Karaskova, J.7
Rosen, B.8
Murphy, J.9
Laframboise, S.10
-
4
-
-
0035184764
-
Identification and classification of differentially expressed genes in renal cell carcinoma by expression profiling on a global human 31,500-element cDNA array
-
Boer,J.M., Huber,W.K., Sültmann,H., Wilmer,F., von Heydebreck,A., Haas,S., Korn,B., Gunawan,B., Vente,A., Füzesi,L. et al. (2001) Identification and classification of differentially expressed genes in renal cell carcinoma by expression profiling on a global human 31,500-element cDNA array. Genome Res., 11, 1861-1870.
-
(2001)
Genome Res.
, vol.11
, pp. 1861-1870
-
-
Boer, J.M.1
Huber, W.K.2
Sültmann, H.3
Wilmer, F.4
von Heydebreck, A.5
Haas, S.6
Korn, B.7
Gunawan, B.8
Vente, A.9
Füzesi, L.10
-
5
-
-
0032561246
-
The transcriptional program of sporulation in budding yeast
-
Chu,S., DeRisi,J., Eisen,M., Mulholland,J., Botstein,D., Brown,P.O. and Herskowitz,I. (1998) The transcriptional program of sporulation in budding yeast. Science, 282, 699-705.
-
(1998)
Science
, vol.282
, pp. 699-705
-
-
Chu, S.1
DeRisi, J.2
Eisen, M.3
Mulholland, J.4
Botstein, D.5
Brown, P.O.6
Herskowitz, I.7
-
8
-
-
0037076342
-
Initiating oncogenic event determines gene-expression patterns of human breast cancer models
-
Desai,K.V., Xiao,N., Wang,W., Gangi,L., Greene,J., Powell,J.I., Dickson,R., Furth,P., Hunter,K., Kucherlapati,R. et al. (2002) Initiating oncogenic event determines gene-expression patterns of human breast cancer models. Proc. Natl Acad. Sci. USA, 99, 6967-6972.
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 6967-6972
-
-
Desai, K.V.1
Xiao, N.2
Wang, W.3
Gangi, L.4
Greene, J.5
Powell, J.I.6
Dickson, R.7
Furth, P.8
Hunter, K.9
Kucherlapati, R.10
-
9
-
-
0036855402
-
Comparison of microarray designs for class comparison and class discovery
-
Dobbin,K. and Simon,R. (2002) Comparison of microarray designs for class comparison and class discovery. Bioinformatics, 18, 1438-1445.
-
(2002)
Bioinformatics
, vol.18
, pp. 1438-1445
-
-
Dobbin, K.1
Simon, R.2
-
10
-
-
0030763177
-
Genome screening by comparative genomic hybridization
-
Forozan,F., Karhu,R., Kononen,J., Kallioniemi,A. and Kallioniemi,O. (1997) Genome screening by comparative genomic hybridization. Trends Genet., 13, 405-409.
-
(1997)
Trends Genet.
, vol.13
, pp. 405-409
-
-
Forozan, F.1
Karhu, R.2
Kononen, J.3
Kallioniemi, A.4
Kallioniemi, O.5
-
11
-
-
0034786939
-
Unfolding of microarray data
-
Goryachev,A.B., Macgregor,P.F. and Edwards,A.M. (2001) Unfolding of microarray data. J. Comput. Biol., 8, 443-461.
-
(2001)
J. Comput. Biol.
, vol.8
, pp. 443-461
-
-
Goryachev, A.B.1
Macgregor, P.F.2
Edwards, A.M.3
-
12
-
-
0034921979
-
Testing for differentially-expressed genes by maximum-likelihood analysis of microarray data
-
Ideker,T., Thorsson,V., Siegel,A.F. and Hood,L.E. (2000) Testing for differentially-expressed genes by maximum-likelihood analysis of microarray data. J. Comput. Biol., 7, 805-817.
-
(2000)
J. Comput. Biol.
, vol.7
, pp. 805-817
-
-
Ideker, T.1
Thorsson, V.2
Siegel, A.F.3
Hood, L.E.4
-
13
-
-
0037014795
-
Gene expression profiles of BRCA1-linked, BRCA2-linked, and sporadic ovarian cancers
-
Jazaeri,A.A., Yee,C.J., Sotiriou,C., Brantley,K.R., Boyd,J. and Liu,E.T. (2002) Gene expression profiles of BRCA1-linked, BRCA2-linked, and sporadic ovarian cancers. J. Natl Cancer Inst., 94, 990-1000.
-
(2002)
J. Natl. Cancer Inst.
, vol.94
, pp. 990-1000
-
-
Jazaeri, A.A.1
Yee, C.J.2
Sotiriou, C.3
Brantley, K.R.4
Boyd, J.5
Liu, E.T.6
-
14
-
-
0035733752
-
The contributions of sex, genotype and age to transcriptional variance in Drosophila melanogaster
-
Jin,W., Riley,R.M., Wolfinger,R.D., White,K.P., Passador-Gurgel,G. and Gibson,G. (2001) The contributions of sex, genotype and age to transcriptional variance in Drosophila melanogaster. Nature Genet., 29, 389-395.
-
(2001)
Nature Genet.
, vol.29
, pp. 389-395
-
-
Jin, W.1
Riley, R.M.2
Wolfinger, R.D.3
White, K.P.4
Passador-Gurgel, G.5
Gibson, G.6
-
15
-
-
0034927555
-
Analysis of variance for gene expression microarray data
-
Kerr,M.K., Martin,M. and Churchill,G.A. (2001) Analysis of variance for gene expression microarray data. J. Comput. Biol., 7, 819-837.
-
(2001)
J. Comput. Biol.
, vol.7
, pp. 819-837
-
-
Kerr, M.K.1
Martin, M.2
Churchill, G.A.3
-
16
-
-
0036012367
-
Statistical analysis of a gene expression microarray experiment with replication
-
Kerr,M.K., Afshari,C.A., Bennett,L., Bushel,P., Martinez,J., Walker,N.J. and Churchill,G.A. (2002) Statistical analysis of a gene expression microarray experiment with replication. Statistica Sinica, 12, 203-217.
-
(2002)
Statistica Sinica
, vol.12
, pp. 203-217
-
-
Kerr, M.K.1
Afshari, C.A.2
Bennett, L.3
Bushel, P.4
Martinez, J.5
Walker, N.J.6
Churchill, G.A.7
-
17
-
-
0037166967
-
Expression profiling of Drosophila imaginal discs
-
research0038.1-0038.16
-
Klebes,A., Biehs,B., Cifuentes,F. and Kornberg,T.B. (2002) Expression profiling of Drosophila imaginal discs. Genome Biol., 3, research0038.1-0038.16.
-
(2002)
Genome Biol.
, vol.3
-
-
Klebes, A.1
Biehs, B.2
Cifuentes, F.3
Kornberg, T.B.4
-
18
-
-
0034730124
-
Importance of replication in microarray gene expression studies: Statistical methods and evidence from repetitive cDNA hybridizations
-
Lee,M.T., Kuo,F.C., Whitmore,G.A. and Sklar,J. (2000) Importance of replication in microarray gene expression studies: Statistical methods and evidence from repetitive cDNA hybridizations. Proc. Natl Acad. Sci. USA, 97, 9834-9839.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 9834-9839
-
-
Lee, M.T.1
Kuo, F.C.2
Whitmore, G.A.3
Sklar, J.4
-
19
-
-
0037071875
-
Molecular diagnosis of colorectal tumors by expression profiles of 50 genes expressed differentially in adenomas and carcinomas
-
Lin,Y., Furukawa,Y., Tsunoda,T., Yue,C., Yang,K. and Nakamura,Y. (2002) Molecular diagnosis of colorectal tumors by expression profiles of 50 genes expressed differentially in adenomas and carcinomas. Oncogene, 21, 4120-4128.
-
(2002)
Oncogene
, vol.21
, pp. 4120-4128
-
-
Lin, Y.1
Furukawa, Y.2
Tsunoda, T.3
Yue, C.4
Yang, K.5
Nakamura, Y.6
-
20
-
-
0037172983
-
Transformation of follicular lymphoma to diffuse large-cell lymphoma: Alternative patterns with increased or decreased expression of c-myc and its regulated genes
-
Lossos,I.S., Alizadeh,A.A., Diehn,M., Warnke,R., Thorstenson,Y., Oefner,P.J., Brown,P.O., Botstein,D. and Levy,R. (2002) Transformation of follicular lymphoma to diffuse large-cell lymphoma: alternative patterns with increased or decreased expression of c-myc and its regulated genes. Proc. Natl Acad. Sci. USA, 99, 8886-8891.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 8886-8891
-
-
Lossos, I.S.1
Alizadeh, A.A.2
Diehn, M.3
Warnke, R.4
Thorstenson, Y.5
Oefner, P.J.6
Brown, P.O.7
Botstein, D.8
Levy, R.9
-
21
-
-
0037015215
-
Comparison of different labeling methods for two-channel high-density microarray experiments
-
Manduchi,E., Scearce,L.M., Brestelli,J.E., Grant,G.R., Kaestner,K.H. and Stoeckert,Jr,C.H. (2002) Comparison of different labeling methods for two-channel high-density microarray experiments. Physiol Genomics, 10, 169-179.
-
(2002)
Physiol. Genomics
, vol.10
, pp. 169-179
-
-
Manduchi, E.1
Scearce, L.M.2
Brestelli, J.E.3
Grant, G.R.4
Kaestner, K.H.5
Stoeckert C.H., Jr.6
-
22
-
-
0035684378
-
A model for measurement error for gene expression arrays
-
Rocke,D.M. and Durbin,B. (2001) A model for measurement error for gene expression arrays. J. Comput. Biol., 8, 557-569.
-
(2001)
J. Comput. Biol.
, vol.8
, pp. 557-569
-
-
Rocke, D.M.1
Durbin, B.2
-
23
-
-
0038820530
-
The choice of subsample size in two-stage sampling
-
Sadooghi-Alvandi,M. (1986) The choice of subsample size in two-stage sampling. J. Am. Stat. Assoc., 81, 555-558.
-
(1986)
J. Am. Stat. Assoc.
, vol.81
, pp. 555-558
-
-
Sadooghi-Alvandi, M.1
-
25
-
-
0034625797
-
A novel, sensitive detection system for high-density microarrays using dendrimer technology
-
Stears,R.L., Getts,R.C. and Gullans,S.R. (2000) A novel, sensitive detection system for high-density microarrays using dendrimer technology. Physiol Genomics, 3, 93-99.
-
(2000)
Physiol. Genomics
, vol.3
, pp. 93-99
-
-
Stears, R.L.1
Getts, R.C.2
Gullans, S.R.3
-
26
-
-
0035875553
-
Issues in cDNA microarray analysis: Quality filtering, channel normalization, models of variations and assessment of gene effects
-
Tseng,G.C., Oh,M., Rohlin,L., Liao,J. and Wong,W.H. (2001) Issues in cDNA microarray analysis: quality filtering, channel normalization, models of variations and assessment of gene effects. Nucleic Acids Res., 29, 2549-2557.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 2549-2557
-
-
Tseng, G.C.1
Oh, M.2
Rohlin, L.3
Liao, J.4
Wong, W.H.5
-
27
-
-
0035942271
-
Significance analysis of microarrays applied to the ionizing radiation response
-
Tusher,V.G., Tibshirani,R. and Chu,G. (2001) Significance analysis of microarrays applied to the ionizing radiation response. Proc. Natl Acad. Sci. USA, 9, 5116-5121.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.9
, pp. 5116-5121
-
-
Tusher, V.G.1
Tibshirani, R.2
Chu, G.3
-
28
-
-
0035433128
-
Quantitative quality control in microarray image processing and data acquisition
-
Wang,X., Ghosh,S. and Guo,S. (2001) Quantitative quality control in microarray image processing and data acquisition. Nucleic Acids Res., 29, e75.
-
(2001)
Nucleic Acids Res.
, vol.29
-
-
Wang, X.1
Ghosh, S.2
Guo, S.3
-
29
-
-
0036977250
-
The microarray: Potential applications for ophthalmic research
-
Wilson,A.S., Hobbs,B.G., Speed,T.P. and Rakoczy,P.E. (2002) The microarray: potential applications for ophthalmic research. Mol. Vis., 8, 259-270.
-
(2002)
Mol. Vis.
, vol.8
, pp. 259-270
-
-
Wilson, A.S.1
Hobbs, B.G.2
Speed, T.P.3
Rakoczy, P.E.4
-
30
-
-
0035687554
-
Assessing gene significance from cDNA microarray expression data via mixed models
-
Wolfinger,R.D., Gibson,G., Wolfinger,E.D., Bennett,L., Hamadeh,H., Bushel,P., Afshari,C. and Paules,R.S. (2001) Assessing gene significance from cDNA microarray expression data via mixed models. J. Comput. Biol., 8, 625-637.
-
(2001)
J. Comput. Biol.
, vol.8
, pp. 625-637
-
-
Wolfinger, R.D.1
Gibson, G.2
Wolfinger, E.D.3
Bennett, L.4
Hamadeh, H.5
Bushel, P.6
Afshari, C.7
Paules, R.S.8
-
31
-
-
0003576793
-
Normalization for cDNA microarray data
-
Technical Report, 589
-
Yang,Y.H., Dudoit,S., Luu,P. and Speed,T.P. (2001) Normalization for cDNA microarray data. Technical Report, 589. http://stat-www.berkeley.edu/tech-reports/index.html
-
(2001)
-
-
Yang, Y.H.1
Dudoit, S.2
Luu, P.3
Speed, T.P.4
-
32
-
-
0036976368
-
Evaluation and optimization of procedures for target labeling and hybridization of cDNA microarrays
-
Yu,J., Othman,M.I., Farjo,R., Zareparsi,S., MacNee,S.P., Yoshida,S. and Swaroop,A. (2002) Evaluation and optimization of procedures for target labeling and hybridization of cDNA microarrays. Mol. Vis., 8, 130-137.
-
(2002)
Mol. Vis.
, vol.8
, pp. 130-137
-
-
Yu, J.1
Othman, M.I.2
Farjo, R.3
Zareparsi, S.4
MacNee, S.P.5
Yoshida, S.6
Swaroop, A.7
-
33
-
-
0037086088
-
Transcriptional regulation of mitotic genes by camptothecin-induced DNA damage: Microarray analysis of dose- and time-dependent effects
-
Zhou,Y., Gwadry,F.G., Reinhold,W.C., Miller,L.D., Smith,L.H., Scherf,U., Liu,E.T., Kohn,K.W., Pommier,Y. and Weinstein,J.N. (2002) Transcriptional regulation of mitotic genes by camptothecin-induced DNA damage: microarray analysis of dose- and time-dependent effects. Cancer Res., 62, 1688-1695.
-
(2002)
Cancer Res.
, vol.62
, pp. 1688-1695
-
-
Zhou, Y.1
Gwadry, F.G.2
Reinhold, W.C.3
Miller, L.D.4
Smith, L.H.5
Scherf, U.6
Liu, E.T.7
Kohn, K.W.8
Pommier, Y.9
Weinstein, J.N.10
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