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Volumn 22, Issue 3, 2003, Pages 735-745

The RdgC protein of Escherichia coli binds DNA and counters a toxic effect of RecFOR in strains lacking the replication restart protein PriA

Author keywords

DNA repair; RecFOR; Recombination; RNA polymerase; SSB

Indexed keywords

BACTERIAL DNA; DNA BINDING PROTEIN; DOUBLE STRANDED DNA; HELICASE; NUCLEIC ACID BINDING PROTEIN; PROTEIN PRIA; PROTEIN RDGC; RECF PROTEIN; RECO PROTEIN; RECR PROTEIN; SINGLE STRANDED DNA; UNCLASSIFIED DRUG;

EID: 0037415736     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1093/emboj/cdg048     Document Type: Article
Times cited : (32)

References (46)
  • 1
    • 0031444642 scopus 로고    scopus 로고
    • The translocating RecBCD enzyme stimulates recombination by directing RecA protein onto ssDNA in a X-regulated manner
    • Anderson, D.G. and Kowalczykowski,S.C. (1997) The translocating RecBCD enzyme stimulates recombination by directing RecA protein onto ssDNA in a X-regulated manner. Cell, 90, 77-86.
    • (1997) Cell , vol.90 , pp. 77-86
    • Anderson, D.G.1    Kowalczykowski, S.C.2
  • 2
    • 0032716841 scopus 로고    scopus 로고
    • Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid
    • Azam, T.A., Iwata, A., Nishimura, A., Ueda, S. and Ishihama, A. (1999) Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid. J. Bacteriol., 181, 6361-6370.
    • (1999) J. Bacteriol. , vol.181 , pp. 6361-6370
    • Azam, T.A.1    Iwata, A.2    Nishimura, A.3    Ueda, S.4    Ishihama, A.5
  • 3
    • 0002739483 scopus 로고    scopus 로고
    • Derivations and genotypes of some mutant derivatives of Escherichia coli K-12
    • Neidhardt, F.C. et al. (eds), ASM Press, Washington, DC
    • Bachmann, B.J. (1996) Derivations and genotypes of some mutant derivatives of Escherichia coli K-12. In Neidhardt, F.C. et al. (eds), Escherichia coli and Salmonella Cellular and Molecular Biology, 2nd Edition. ASM Press, Washington, DC, pp. 2460-2488.
    • (1996) Escherichia Coli and Salmonella Cellular and Molecular Biology, 2nd Edition , pp. 2460-2488
    • Bachmann, B.J.1
  • 4
    • 0037126613 scopus 로고    scopus 로고
    • The RecOR proteins modulate RecA protein function at 5′ ends of single-stranded DNA
    • Bork, J.M., Cox, M.M. and Inman, R.B. (2001) The RecOR proteins modulate RecA protein function at 5′ ends of single-stranded DNA. EMBO J., 20, 7313-7322.
    • (2001) EMBO J. , vol.20 , pp. 7313-7322
    • Bork, J.M.1    Cox, M.M.2    Inman, R.B.3
  • 5
    • 0030940299 scopus 로고    scopus 로고
    • Sequence-specificity and biochemical characterization of the RusA Holliday junction resolvase of Escherichia coli
    • Chan, S.N., Harris, L., Bolt, E.L., Whitby, M.C. and Lloyd, R.G. (1997) Sequence-specificity and biochemical characterization of the RusA Holliday junction resolvase of Escherichia coli. J. Biol. Chem., 272, 14873-14882.
    • (1997) J. Biol. Chem. , vol.272 , pp. 14873-14882
    • Chan, S.N.1    Harris, L.2    Bolt, E.L.3    Whitby, M.C.4    Lloyd, R.G.5
  • 6
    • 0032740855 scopus 로고    scopus 로고
    • RecQ and RecJ process blocked replication forks prior to the resumption of replication in UV-irradiated Escherichia coli
    • Courcelle, J. and Hanawalt, P.C. (1999) RecQ and RecJ process blocked replication forks prior to the resumption of replication in UV-irradiated Escherichia coli. Mol. Gen. Genet., 262, 543-551.
    • (1999) Mol. Gen. Genet. , vol.262 , pp. 543-551
    • Courcelle, J.1    Hanawalt, P.C.2
  • 7
    • 0035902521 scopus 로고    scopus 로고
    • Participation of recombination proteins in rescue of arrested replication forks in UV-irradiated Escherichia coli need not involve recombination
    • Courcelle, J. and Hanawalt, P.C. (2001) Participation of recombination proteins in rescue of arrested replication forks in UV-irradiated Escherichia coli need not involve recombination. Proc. Natl Acad. Sci. USA, 98, 8196-8202.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 8196-8202
    • Courcelle, J.1    Hanawalt, P.C.2
  • 9
    • 0026470852 scopus 로고
    • The Fis protein: It's not just for DNA inversion anymore
    • Finkel, S.E. and Johnson, R.C. (1992) The Fis protein: it's not just for DNA inversion anymore. Mol. Microbiol., 6, 3257-3265.
    • (1992) Mol. Microbiol. , vol.6 , pp. 3257-3265
    • Finkel, S.E.1    Johnson, R.C.2
  • 10
    • 0036184234 scopus 로고    scopus 로고
    • Direct rescue of stalled DNA replication forks via the combined action of PriA and RecG helicase activities
    • Gregg, A.V., McGlynn, P., Jaktaji, R.P. and Lloyd, R.G. (2002) Direct rescue of stalled DNA replication forks via the combined action of PriA and RecG helicase activities. Mol. Cell, 9, 241-251.
    • (2002) Mol. Cell , vol.9 , pp. 241-251
    • Gregg, A.V.1    McGlynn, P.2    Jaktaji, R.P.3    Lloyd, R.G.4
  • 11
    • 0001674997 scopus 로고
    • Repair and transcription. Collision or collusion?
    • Hanawalt, P.C., Donahue, B.A. and Sweder, K.S. (1994) Repair and transcription. Collision or collusion? Curr. Biol., 4, 518-521.
    • (1994) Curr. Biol. , vol.4 , pp. 518-521
    • Hanawalt, P.C.1    Donahue, B.A.2    Sweder, K.S.3
  • 12
    • 0035812634 scopus 로고    scopus 로고
    • Escherichia coli PriA helicase: Fork binding orients the helicase to unwind the lagging strand side of arrested replication forks
    • Jones, J.M. and Nakai, H. (2001) Escherichia coli PriA helicase: fork binding orients the helicase to unwind the lagging strand side of arrested replication forks. J. Mol. Biol., 312, 935-947.
    • (2001) J. Mol. Biol. , vol.312 , pp. 935-947
    • Jones, J.M.1    Nakai, H.2
  • 13
    • 0029863634 scopus 로고    scopus 로고
    • The DNA replication priming protein, PriA, is required for homologous recombination and double-strand break repair
    • Kogoma, T., Cadwell, G.W., Barnard, K.G. and Asai, T. (1996) The DNA replication priming protein, PriA, is required for homologous recombination and double-strand break repair. J. Bacteriol., 178, 1258-1264.
    • (1996) J. Bacteriol. , vol.178 , pp. 1258-1264
    • Kogoma, T.1    Cadwell, G.W.2    Barnard, K.G.3    Asai, T.4
  • 14
    • 0032715175 scopus 로고    scopus 로고
    • Recombinational repair of DNA damage in Escherichia coli and bacteriophage λ
    • Kuzminov, A. (1999) Recombinational repair of DNA damage in Escherichia coli and bacteriophage λ. Microbiol. Mol. Biol. Rev., 63, 751-813.
    • (1999) Microbiol. Mol. Biol. Rev. , vol.63 , pp. 751-813
    • Kuzminov, A.1
  • 15
    • 0033609892 scopus 로고    scopus 로고
    • PriA-directed assembly of a primosome on D loop DNA
    • Liu, J. and Marians, K.J. (1999) PriA-directed assembly of a primosome on D loop DNA. J. Biol. Chem., 274, 25033-25041.
    • (1999) J. Biol. Chem. , vol.274 , pp. 25033-25041
    • Liu, J.1    Marians, K.J.2
  • 16
    • 0033616683 scopus 로고    scopus 로고
    • Replication fork assembly at recombination intermediates is required for bacterial growth
    • Liu, J., Xu, L., Sandler, S.J. and Marians, K.J. (1999) Replication fork assembly at recombination intermediates is required for bacterial growth. Proc. Natl. Acad. Sci. USA, 96, 3552-3555.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 3552-3555
    • Liu, J.1    Xu, L.2    Sandler, S.J.3    Marians, K.J.4
  • 17
    • 0025924538 scopus 로고
    • Genetic analysis of the recG locus of Escherichia coli K-12 and of its role in recombination and DNA repair
    • Lloyd, R.G. and Buckman, C. (1991) Genetic analysis of the recG locus of Escherichia coli K-12 and of its role in recombination and DNA repair. J. Bacteriol., 173, 1004-1011.
    • (1991) J. Bacteriol. , vol.173 , pp. 1004-1011
    • Lloyd, R.G.1    Buckman, C.2
  • 19
    • 0024655588 scopus 로고
    • Identification of the recR locus of Escherichia coli K-12 and analysis of its role in recombination and DNA repair
    • Mahdi, A.A. and Lloyd, R.G. (1989) Identification of the recR locus of Escherichia coli K-12 and analysis of its role in recombination and DNA repair. Mol. Gen. Genet., 216, 503-510.
    • (1989) Mol. Gen. Genet. , vol.216 , pp. 503-510
    • Mahdi, A.A.1    Lloyd, R.G.2
  • 20
    • 0034177963 scopus 로고    scopus 로고
    • PriA-directed replication fork restart in Escherichia coli
    • Marians, K.J. (2000) PriA-directed replication fork restart in Escherichia coli. Trends Biochem. Sci., 25, 185-189.
    • (2000) Trends Biochem. Sci. , vol.25 , pp. 185-189
    • Marians, K.J.1
  • 21
    • 0034737294 scopus 로고    scopus 로고
    • Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression
    • McGlynn, P. and Lloyd, R.G. (2000) Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression. Cell, 101, 35-45.
    • (2000) Cell , vol.101 , pp. 35-45
    • McGlynn, P.1    Lloyd, R.G.2
  • 22
    • 0036683338 scopus 로고    scopus 로고
    • Genome stability and the processing of damaged replication forks by RecG
    • McGlynn, P. and Lloyd, R.G. (2002a) Genome stability and the processing of damaged replication forks by RecG. Trends Genet., 18, 413-419.
    • (2002) Trends Genet. , vol.18 , pp. 413-419
    • McGlynn, P.1    Lloyd, R.G.2
  • 23
    • 0036844340 scopus 로고    scopus 로고
    • Recombinational repair and restart of damaged replication forks
    • McGlynn, P. and Lloyd, R.G. (2002b) Recombinational repair and restart of damaged replication forks. Nat. Rev. Mol. Cell Biol., 3, 859-870.
    • (2002) Nat. Rev. Mol. Cell Biol. , vol.3 , pp. 859-870
    • McGlynn, P.1    Lloyd, R.G.2
  • 24
    • 0030852247 scopus 로고    scopus 로고
    • The DNA replication protein PriA and the recombination protein RecG bind D-loops
    • McGlynn, P., Al-Deib, A.A., Liu, J., Marians, K.J. and Lloyd, R.G. (1997) The DNA replication protein PriA and the recombination protein RecG bind D-loops. J. Mol. Biol., 270, 212-221.
    • (1997) J. Mol. Biol. , vol.270 , pp. 212-221
    • McGlynn, P.1    Al-Deib, A.A.2    Liu, J.3    Marians, K.J.4    Lloyd, R.G.5
  • 25
    • 0033968143 scopus 로고    scopus 로고
    • A homologue of the recombination-dependent growth gene, rdgC, is involved in gonococcal pilin antigenic variation
    • Mehr, I.J., Long, C.D., Serkin, C.D. and Seifert, H.S. (2000) A homologue of the recombination-dependent growth gene, rdgC, is involved in gonococcal pilin antigenic variation. Genetics, 154, 523-532.
    • (2000) Genetics , vol.154 , pp. 523-532
    • Mehr, I.J.1    Long, C.D.2    Serkin, C.D.3    Seifert, H.S.4
  • 26
    • 0033909543 scopus 로고    scopus 로고
    • Resolution of Holliday junctions by RuvABC prevents dimer formation in rep mutants and UV-irradiated cells
    • Michel, B., Recchia, G.D., Penel-Colin, M., Ehrlich, S.D. and Sherratt, D.J. (2000) Resolution of Holliday junctions by RuvABC prevents dimer formation in rep mutants and UV-irradiated cells. Mol. Microbiol., 37, 180-191.
    • (2000) Mol. Microbiol. , vol.37 , pp. 180-191
    • Michel, B.1    Recchia, G.D.2    Penel-Colin, M.3    Ehrlich, S.D.4    Sherratt, D.J.5
  • 28
    • 0033053014 scopus 로고    scopus 로고
    • Identification of two new proteins in spermidine nucleoids isolated from Escherichia coli
    • Murphy, L.D., Rosner, J.L., Zimmerman, S.B. and Esposito, D. (1999) Identification of two new proteins in spermidine nucleoids isolated from Escherichia coli. J. Bacteriol., 181, 3842-3844.
    • (1999) J. Bacteriol. , vol.181 , pp. 3842-3844
    • Murphy, L.D.1    Rosner, J.L.2    Zimmerman, S.B.3    Esposito, D.4
  • 29
    • 0025836589 scopus 로고
    • Inactivation of the Escherichia coli PriA DNA replication protein induces the SOS response
    • Nurse, P., Zavitz, K.H. and Marians, K.J. (1991) Inactivation of the Escherichia coli PriA DNA replication protein induces the SOS response. J. Bacteriol., 173, 6686-6693.
    • (1991) J. Bacteriol. , vol.173 , pp. 6686-6693
    • Nurse, P.1    Zavitz, K.H.2    Marians, K.J.3
  • 30
    • 0037124327 scopus 로고    scopus 로고
    • Essential bacterial helicases that counteract the toxicity of recombination proteins
    • Petit, M.A. and Ehrlich, D. (2002) Essential bacterial helicases that counteract the toxicity of recombination proteins. EMBO J., 21, 3137-3147.
    • (2002) EMBO J. , vol.21 , pp. 3137-3147
    • Petit, M.A.1    Ehrlich, D.2
  • 31
    • 0036267593 scopus 로고    scopus 로고
    • Replication restart in UV-irradiated Escherichia coli involving pols II, III, V, PriA, RecA and RecFOR proteins
    • Rangarajan, S., Woodgate, R. and Goodman, M.F. (2002) Replication restart in UV-irradiated Escherichia coli involving pols II, III, V, PriA, RecA and RecFOR proteins. Mol. Microbiol., 43, 617-628.
    • (2002) Mol. Microbiol. , vol.43 , pp. 617-628
    • Rangarajan, S.1    Woodgate, R.2    Goodman, M.F.3
  • 32
    • 0035902453 scopus 로고    scopus 로고
    • RecA protein promotes the regression of stalled replication forks in vitro
    • Robu, M.E., Inman, R.B. and Cox, M.M. (2001) RecA protein promotes the regression of stalled replication forks in vitro. Proc. Natl Acad. Sci. USA, 98, 8211-8218.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 8211-8218
    • Robu, M.E.1    Inman, R.B.2    Cox, M.M.3
  • 33
    • 0028204792 scopus 로고
    • Mutation of recF, recJ, recO, recQ, or recR improves Hfr recombination in resolvase-deficient ruv recG strains of Escherichia coli
    • Ryder, L., Whitby, M.C. and Lloyd, R.G. (1994) Mutation of recF, recJ, recO, recQ, or recR improves Hfr recombination in resolvase-deficient ruv recG strains of Escherichia coli. J. Bacteriol., 176, 1570-1577.
    • (1994) J. Bacteriol. , vol.176 , pp. 1570-1577
    • Ryder, L.1    Whitby, M.C.2    Lloyd, R.G.3
  • 34
    • 0030000241 scopus 로고    scopus 로고
    • Recombination-dependent growth in exonuclease depleted recBC sbcBC strains of E. coli K-12
    • Ryder, L., Sharples, G.J. and Lloyd, R.G. (1996) Recombination-dependent growth in exonuclease depleted recBC sbcBC strains of E. coli K-12. Genetics, 143, 1101-1114.
    • (1996) Genetics , vol.143 , pp. 1101-1114
    • Ryder, L.1    Sharples, G.J.2    Lloyd, R.G.3
  • 35
    • 0030047970 scopus 로고    scopus 로고
    • Overlapping functions for recF and priA in cell viability and UV-inducible SOS expression are distinguished by dnaC809 in Escherichia coli K-12
    • Sandler, S.J. (1996) Overlapping functions for recF and priA in cell viability and UV-inducible SOS expression are distinguished by dnaC809 in Escherichia coli K-12. Mol. Microbiol., 19, 871-880.
    • (1996) Mol. Microbiol. , vol.19 , pp. 871-880
    • Sandler, S.J.1
  • 36
    • 0033988501 scopus 로고    scopus 로고
    • Role of PriA in replication fork reactivation in Escherichia coli
    • Sandler, S.J. and Marians, K.J. (2000) Role of PriA in replication fork reactivation in Escherichia coli. J. Bacteriol., 182, 9-13.
    • (2000) J. Bacteriol. , vol.182 , pp. 9-13
    • Sandler, S.J.1    Marians, K.J.2
  • 37
    • 0029960337 scopus 로고    scopus 로고
    • Differential suppression of priA2::kan phenotypes in Escherichia coli K-12 by mutations in priA, lexA and dnaC
    • Sandler, S.J., Samra, H.S. and Clark, A.J. (1996) Differential suppression of priA2::kan phenotypes in Escherichia coli K-12 by mutations in priA, lexA and dnaC. Genetics, 143, 5-13.
    • (1996) Genetics , vol.143 , pp. 5-13
    • Sandler, S.J.1    Samra, H.S.2    Clark, A.J.3
  • 39
    • 0032582794 scopus 로고    scopus 로고
    • RuvAB acts at arrested replication forks
    • Seigneur, M., Bidnenko, V., Ehrlich, S.D. and Michel, B. (1998) RuvAB acts at arrested replication forks. Cell, 95, 419-430.
    • (1998) Cell , vol.95 , pp. 419-430
    • Seigneur, M.1    Bidnenko, V.2    Ehrlich, S.D.3    Michel, B.4
  • 40
    • 0035812836 scopus 로고    scopus 로고
    • Structural analysis of DNA replication fork reversal by RecG
    • Singleton, M.R., Scaife, S. and Wigley, D.B. (2001) Structural analysis of DNA replication fork reversal by RecG. Cell, 107, 79-89.
    • (2001) Cell , vol.107 , pp. 79-89
    • Singleton, M.R.1    Scaife, S.2    Wigley, D.B.3
  • 41
    • 0028034452 scopus 로고
    • Protein interactions in genetic recombination in Escherichia coli: Interactions involving RecO and RecR overcome the inhibition of RecA by single-stranded DNA- binding protein
    • Umezu, K. and Kolodner, R.D. (1994) Protein interactions in genetic recombination in Escherichia coli: interactions involving RecO and RecR overcome the inhibition of RecA by single-stranded DNA- binding protein. J. Biol. Chem., 269, 30005-30013.
    • (1994) J. Biol. Chem. , vol.269 , pp. 30005-30013
    • Umezu, K.1    Kolodner, R.D.2
  • 42
    • 0027238208 scopus 로고
    • Biochemical interaction of the Escherichia coli RecF, RecO and RecR proteins with RecA protein and single-stranded DNA binding protein
    • Umezu, K., Chi, N. and Kolodner, R.D. (1993) Biochemical interaction of the Escherichia coli RecF, RecO and RecR proteins with RecA protein and single-stranded DNA binding protein. Proc. Natl Acad. Sci. USA, 90, 3875-3879.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 3875-3879
    • Umezu, K.1    Chi, N.2    Kolodner, R.D.3
  • 43
    • 0036712428 scopus 로고    scopus 로고
    • When machines get stuck - Obstructed RNA polymerase II: Displacement, degradation or suicide
    • van den Boom, V., Jaspers, N.G.J. and Vermeulen, W. (2002) When machines get stuck - obstructed RNA polymerase II: displacement, degradation or suicide. BioEssays, 24, 780-784.
    • (2002) BioEssays , vol.24 , pp. 780-784
    • Van den Boom, V.1    Jaspers, N.G.J.2    Vermeulen, W.3
  • 44
    • 0030700498 scopus 로고    scopus 로고
    • Recombinational DNA repair: The RecF and RecR proteins limit the extension of RecA filaments beyond single-strand DNA gaps
    • Webb, B.L., Cox, M.M. and Inman, R.B. (1997) Recombinational DNA repair: the RecF and RecR proteins limit the extension of RecA filaments beyond single-strand DNA gaps. Cell, 91, 347-356.
    • (1997) Cell , vol.91 , pp. 347-356
    • Webb, B.L.1    Cox, M.M.2    Inman, R.B.3
  • 45
    • 0034677944 scopus 로고    scopus 로고
    • Purification and characterization of DnaC810, a primosomal protein capable of bypassing PriA function
    • Xu, L. and Marians, K.J. (2000) Purification and characterization of DnaC810, a primosomal protein capable of bypassing PriA function. J. Biol. Chem., 275, 8196-8205.
    • (2000) J. Biol. Chem. , vol.275 , pp. 8196-8205
    • Xu, L.1    Marians, K.J.2
  • 46
    • 0026726616 scopus 로고
    • ATPase-deficient mutants of the Escherichia coli DNA replication protein PriA are capable of catalyzing the assembly of active primosomes
    • Zavitz, K.H. and Marians, K.J. (1992) ATPase-deficient mutants of the Escherichia coli DNA replication protein PriA are capable of catalyzing the assembly of active primosomes. J. Biol. Chem., 267, 6933-6940.
    • (1992) J. Biol. Chem. , vol.267 , pp. 6933-6940
    • Zavitz, K.H.1    Marians, K.J.2


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