-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., T. L. Madden, A. A. Schäffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0028946084
-
Phylogenetic identification and in situ detection of individual microbial cells without cultivation
-
Amann, R. I., W. Ludwig, and K. H. Schleifer. 1995. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59:143-169.
-
(1995)
Microbiol. Rev.
, vol.59
, pp. 143-169
-
-
Amann, R.I.1
Ludwig, W.2
Schleifer, K.H.3
-
3
-
-
0004270170
-
-
John Wiley & Sons, New York, N.Y.
-
Ausubel, F. M., R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith, and K. Struhl. 1987. Current protocols in molecular biology. John Wiley & Sons, New York, N.Y.
-
(1987)
Current Protocols in Molecular Biology
-
-
Ausubel, F.M.1
Brent, R.2
Kingston, R.E.3
Moore, D.D.4
Seidman, J.G.5
Smith, J.A.6
Struhl, K.7
-
4
-
-
0034554741
-
Construction and analysis of bacterial artificial chromosome libraries from a marine microbial assemblage
-
Béjà, O., M. T. Suzuki, E. V. Koonin, L. Aravind, A. Hadd, L. P. Nguyen, M. Amjadi, C. Garrigues, S. B. Jovanovich, R. A. Feldman, and E. F. DeLong. 2000. Construction and analysis of bacterial artificial chromosome libraries from a marine microbial assemblage. Environ. Microbiol. 2:516-529.
-
(2000)
Environ. Microbiol.
, vol.2
, pp. 516-529
-
-
Béjà, O.1
Suzuki, M.T.2
Koonin, E.V.3
Aravind, L.4
Hadd, A.5
Nguyen, L.P.6
Amjadi, M.7
Garrigues, C.8
Jovanovich, S.B.9
Feldman, R.A.10
DeLong, E.F.11
-
5
-
-
0025923076
-
+-dependent alcohol dehydrogenases of Methanogenium liminitans and Methanobacterium palustre specific for secondary alcohols
-
+-dependent alcohol dehydrogenases of Methanogenium liminitans and Methanobacterium palustre specific for secondary alcohols. Eur. J. Biochem. 200:43-51.
-
(1991)
Eur. J. Biochem.
, vol.200
, pp. 43-51
-
-
Bleicher, K.1
Winter, J.2
-
6
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford, M. M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72:248-254.
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
7
-
-
0035963668
-
Cloning and heterologous expression of a natural product biosynthetic gene cluster from eDNA
-
Brady, S. F., C. J. Chao, J. Handelsman, and J. Clardy. 2001. Cloning and heterologous expression of a natural product biosynthetic gene cluster from eDNA. Org. Lett. 3:1981-1984.
-
(2001)
Org. Lett.
, vol.3
, pp. 1981-1984
-
-
Brady, S.F.1
Chao, C.J.2
Handelsman, J.3
Clardy, J.4
-
8
-
-
0002863274
-
Cultivation of microbial consortia and communities
-
J. H. Hurst, G. R. Knudsen, M. J. McInerey, L. D. Stetzenbach, and M. V. Walter (ed.). ASM Press, Washington, D.C.
-
Caldwell, D. E., G. M. Wolfaardts, D. R. Kober, and J. R. Lawrence. 1997. Cultivation of microbial consortia and communities, p. 79-90. In J. H. Hurst, G. R. Knudsen, M. J. McInerey, L. D. Stetzenbach, and M. V. Walter (ed.), Manual of environmental microbiology. ASM Press, Washington, D.C.
-
(1997)
Manual of Environmental Microbiology
, pp. 79-90
-
-
Caldwell, D.E.1
Wolfaardts, G.M.2
Kober, D.R.3
Lawrence, J.R.4
-
9
-
-
0345817539
-
Regeneration of nicotinamide cofactors for use in organic synthesis
-
Chenault, H. K., and G. M. Whitesides. 1987. Regeneration of nicotinamide cofactors for use in organic synthesis. Appl. Biochem. Biotechnol. 14:147-197.
-
(1987)
Appl. Biochem. Biotechnol.
, vol.14
, pp. 147-197
-
-
Chenault, H.K.1
Whitesides, G.M.2
-
10
-
-
0023267608
-
Cloning and sequencing of the alcohol dehydrogenase II gene from Zymomonas mobilis
-
Conway, T., G. W. Sewell, Y. A. Osman, and L. O. Ingram. 1987. Cloning and sequencing of the alcohol dehydrogenase II gene from Zymomonas mobilis. J. Bacteriol. 169:2591-2597.
-
(1987)
J. Bacteriol.
, vol.169
, pp. 2591-2597
-
-
Conway, T.1
Sewell, G.W.2
Osman, Y.A.3
Ingram, L.O.4
-
12
-
-
0012312048
-
Construction of environmental libraries for functional screening of enzyme activity
-
S. Brakmann and K. Johnsson (ed.). Wiley-VCH Verlag GmbH, Weinheim, Germany
-
Daniel, R. 2002. Construction of environmental libraries for functional screening of enzyme activity, p. 63-78. In S. Brakmann and K. Johnsson (ed.), Directed molecular evolution of proteins. Wiley-VCH Verlag GmbH, Weinheim, Germany.
-
(2002)
Directed Molecular Evolution of Proteins
, pp. 63-78
-
-
Daniel, R.1
-
13
-
-
0029083167
-
Biochemical and molecular characterization of the oxidative branch of glycerol utilization by Citrobacter freundii
-
Daniel, R., K. Stuertz, and G. Gottschalk. 1995. Biochemical and molecular characterization of the oxidative branch of glycerol utilization by Citrobacter freundii. J. Bacteriol. 177:4392-4401.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 4392-4401
-
-
Daniel, R.1
Stuertz, K.2
Gottschalk, G.3
-
14
-
-
0028962143
-
Purification of the 1,3-propanediol dehydrogenase from Citrobacter freundii and cloning, sequencing and overexpression of the corresponding gene in Escherichia coli
-
Daniel, R., R. Boenigk, and G. Gottschalk. 1995. Purification of the 1,3-propanediol dehydrogenase from Citrobacter freundii and cloning, sequencing and overexpression of the corresponding gene in Escherichia coli. J. Bacteriol. 177:2151-2156.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 2151-2156
-
-
Daniel, R.1
Boenigk, R.2
Gottschalk, G.3
-
15
-
-
0032450012
-
12-dependent glycerol and diol dehydratases and organization of the encoding genes
-
12-dependent glycerol and diol dehydratases and organization of the encoding genes. FEMS Microbiol. Rev. 22:553-566.
-
(1998)
FEMS Microbiol. Rev.
, vol.22
, pp. 553-566
-
-
Daniel, R.1
Bobik, T.A.2
Gottschalk, G.3
-
16
-
-
0021760092
-
A comprehensive set of sequence analysis programs for the VAX
-
Devereux, J., P. Haeberli, and O. Smithies. 1984. A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res. 12:387-395.
-
(1984)
Nucleic Acids Res.
, vol.12
, pp. 387-395
-
-
Devereux, J.1
Haeberli, P.2
Smithies, O.3
-
17
-
-
0035163543
-
Direct cloning from enrichment cultures, a reliable strategy for isolation of complete operons and genes from microbial consortia
-
Entcheva, P., W. Liebl, A. Johann, T. Hartsch, and W. Streit. 2001. Direct cloning from enrichment cultures, a reliable strategy for isolation of complete operons and genes from microbial consortia. Appl. Environ. Microbiol. 67:89-99.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 89-99
-
-
Entcheva, P.1
Liebl, W.2
Johann, A.3
Hartsch, T.4
Streit, W.5
-
18
-
-
0036084361
-
The PROSITE database: Its status in 2002
-
Falquet, L., M. Pagni, P. Bucher, N. Hulo, C. J. Sigrist, K. Hofmann, and A. Bairoch. 2002. The PROSITE database: its status in 2002. Nucleic Acids Res. 30:235-238.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 235-238
-
-
Falquet, L.1
Pagni, M.2
Bucher, P.3
Hulo, N.4
Sigrist, C.J.5
Hofmann, K.6
Bairoch, A.7
-
19
-
-
37049088202
-
Enzymes in organic synthesis: Oxidoreductions
-
Fang, J.-M., C.-H. Lin, C. W. Bradshaw, and C.-H. Wong. 1995. Enzymes in organic synthesis: oxidoreductions. J. Chem. Soc. Perkin Trans. 1:967-978.
-
(1995)
J. Chem. Soc. Perkin Trans.
, vol.1
, pp. 967-978
-
-
Fang, J.-M.1
Lin, C.-H.2
Bradshaw, C.W.3
Wong, C.-H.4
-
20
-
-
0036323668
-
Bacterial alkaline proteases: Molecular approaches and industrial applications
-
Gupta, R., Q. K. Berg, and P. Lorenz. 2002. Bacterial alkaline proteases: molecular approaches and industrial applications. Appl. Microbiol. Biotechnol. 59:15-32.
-
(2002)
Appl. Microbiol. Biotechnol.
, vol.59
, pp. 15-32
-
-
Gupta, R.1
Berg, Q.K.2
Lorenz, P.3
-
21
-
-
0032192790
-
Molecular biological access to the chemistry of unknown soil microbes: A new frontier for natural products
-
Handelsman, J., M. R. Rondon, S. F. Brady, J. Clardy, and R. M. Goodman. 1998. Molecular biological access to the chemistry of unknown soil microbes: a new frontier for natural products. Chem. Biol. 5:R245-249.
-
(1998)
Chem. Biol.
, vol.5
-
-
Handelsman, J.1
Rondon, M.R.2
Brady, S.F.3
Clardy, J.4
Goodman, R.M.5
-
22
-
-
0029096520
-
Direct isolation of functional genes encoding cellulases from the microbial consortia in a thermophilic, anaerobic digester maintained on lignocellulose
-
Healy, F. G., R. M. Ray, H. C. Aldrich, A. C. Wilkie, L. O. Ingram, and K. T. Shanmugam. 1995. Direct isolation of functional genes encoding cellulases from the microbial consortia in a thermophilic, anaerobic digester maintained on lignocellulose. Appl. Microbiol. Biotechnol. 43:667-674.
-
(1995)
Appl. Microbiol. Biotechnol.
, vol.43
, pp. 667-674
-
-
Healy, F.G.1
Ray, R.M.2
Aldrich, H.C.3
Wilkie, A.C.4
Ingram, L.O.5
Shanmugam, K.T.6
-
23
-
-
0033916660
-
Screening of environmental DNA libraries for the presence of genes conferring lipolytic activity on Escherichia coli
-
Henne, A., R. A. Schmitz, M. Bömeke, G. Gottschalk, and R. Daniel. 2000. Screening of environmental DNA libraries for the presence of genes conferring lipolytic activity on Escherichia coli. Appl. Environ. Microbiol. 66:3113-3116.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 3113-3116
-
-
Henne, A.1
Schmitz, R.A.2
Bömeke, M.3
Gottschalk, G.4
Daniel, R.5
-
24
-
-
0032863699
-
Construction of environmental DNA libraries in Escherichia coli and screening for the presence of genes conferring utilization of 4-hydroxybutyrate
-
Henne, A., R. Daniel, R. & A., Schmitz, and G. Gottschalk. 1999. Construction of environmental DNA libraries in Escherichia coli and screening for the presence of genes conferring utilization of 4-hydroxybutyrate. Appl. Environ. Microbiol. 65:3901-3907.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 3901-3907
-
-
Henne, A.R.1
Daniel, R.2
Schmitz, A.3
Gottschalk, G.4
-
25
-
-
0030632239
-
New alcohol dehydrogenases for the synthesis of chiral compounds
-
Hummel, W. 1997. New alcohol dehydrogenases for the synthesis of chiral compounds. Adv. Biochem. Eng. Biotechnol. 58:145-184.
-
(1997)
Adv. Biochem. Eng. Biotechnol.
, vol.58
, pp. 145-184
-
-
Hummel, W.1
-
26
-
-
0033485581
-
Large-scale applications of NAD(P)-dependent oxidoreductases: Recent developments
-
Hummel, W. 1999. Large-scale applications of NAD(P)-dependent oxidoreductases: recent developments. Trends Biotechnol. 17:487-492.
-
(1999)
Trends Biotechnol.
, vol.17
, pp. 487-492
-
-
Hummel, W.1
-
27
-
-
0026623341
-
Nucleotide sequencing and characterization of the gene encoding the 45-kilodalton subunit of alcohol dehydrogenase from Acetobacter aceti
-
Inoue, T., M. Sunagawa, A. Mori, A. Imai, C. Imai, M. Fukuda, M. Takagi, and K. Yano. 1992. Nucleotide sequencing and characterization of the gene encoding the 45-kilodalton subunit of alcohol dehydrogenase from Acetobacter aceti. J. Ferment. Bioeng. 73:419-424.
-
(1992)
J. Ferment. Bioeng.
, vol.73
, pp. 419-424
-
-
Inoue, T.1
Sunagawa, M.2
Mori, A.3
Imai, A.4
Imai, C.5
Fukuda, M.6
Takagi, M.7
Yano, K.8
-
30
-
-
0030821912
-
Glycerol conversion to 1,3-propanediol by Clostridium pasteurianum: Cloning and expression of the gene encoding 1,3-propanediol dehydrogenase
-
Luers, F., M. Seyfried, R. Daniel, and G. Gottschalk. 1997. Glycerol conversion to 1,3-propanediol by Clostridium pasteurianum: cloning and expression of the gene encoding 1,3-propanediol dehydrogenase. FEMS Microbiol. Lett. 154:337-345.
-
(1997)
FEMS Microbiol. Lett.
, vol.154
, pp. 337-345
-
-
Luers, F.1
Seyfried, M.2
Daniel, R.3
Gottschalk, G.4
-
31
-
-
0034749815
-
+ antiporter activity on Escherichia coli: Characterization of the recovered genes and the corresponding gene products
-
+ antiporter activity on Escherichia coli: characterization of the recovered genes and the corresponding gene products. J. Bacteriol. 183:6645-6653.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 6645-6653
-
-
Majernik, A.1
Gottschalk, G.2
Daniel, R.3
-
32
-
-
0025883535
-
Characteristics of short-chain alcohol dehydrogenases and related enzymes
-
Persson, B., M. Krook, and H. Jörnvall. 1991. Characteristics of short-chain alcohol dehydrogenases and related enzymes. Eur. J. Biochem. 200:537-543.
-
(1991)
Eur. J. Biochem.
, vol.200
, pp. 537-543
-
-
Persson, B.1
Krook, M.2
Jörnvall, H.3
-
34
-
-
0026734365
-
Anaerobic degradation of 1,2-propanediol by a new Desulfovibrio strain and D. alcohol-vorans
-
Quattara, A. S., N. Cuzin, A. S. Traore, and J.-L. Garcia. 1992. Anaerobic degradation of 1,2-propanediol by a new Desulfovibrio strain and D. alcohol-vorans. Arch. Microbiol. 158:218-225.
-
(1992)
Arch. Microbiol.
, vol.158
, pp. 218-225
-
-
Quattara, A.S.1
Cuzin, N.2
Traore, A.S.3
Garcia, J.-L.4
-
35
-
-
0028212644
-
Molecular characterization of microbial alcohol dehydrogenases
-
Reid, M. F., and C. A. Fewson. 1994. Molecular characterization of microbial alcohol dehydrogenases. Crit. Rev. Microbiol. 20:13-56.
-
(1994)
Crit. Rev. Microbiol.
, vol.20
, pp. 13-56
-
-
Reid, M.F.1
Fewson, C.A.2
-
36
-
-
0037135614
-
A novel, high performance enzyme for starch liquefaction. Discovery and optimization of a low-pH, thermostable alpha-amylase
-
Richardson, T. H., X. Tan, G. Frey, W. Callen, M. Cabell, D. Lam, J. Macomber, J. M. Short, D. E. Robertson, and C. Miller. 2002. A novel, high performance enzyme for starch liquefaction. Discovery and optimization of a low-pH, thermostable alpha-amylase. J. Biol. Chem. 277:26501-26507.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 26501-26507
-
-
Richardson, T.H.1
Tan, X.2
Frey, G.3
Callen, W.4
Cabell, M.5
Lam, D.6
Macomber, J.7
Short, J.M.8
Robertson, D.E.9
Miller, C.10
-
37
-
-
18844481269
-
Cloning the soil metagenome: A strategy for accessing the genetic and functional diversity of uncultured microorganisms
-
Rondon, M. R., P. R. August, A. D. Bettermann, S. F. Brady, T. H. Grossman, M. R. Liles, K. A. Loiacono, B. A. Lynch, L. A. MacNeil, C. Minor, C. L. Tiong, M. Gilman, M. S. Osburne, J. Clardy, J. Handelsman, and R. M. Goodman. 2000. Cloning the soil metagenome: a strategy for accessing the genetic and functional diversity of uncultured microorganisms. Appl. Environ. Microbiol. 66:2541-2547.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 2541-2547
-
-
Rondon, M.R.1
August, P.R.2
Bettermann, A.D.3
Brady, S.F.4
Grossman, T.H.5
Liles, M.R.6
Loiacono, K.A.7
Lynch, B.A.8
MacNeil, L.A.9
Minor, C.10
Tiong, C.L.11
Gilman, M.12
Osburne, M.S.13
Clardy, J.14
Handelsman, J.15
Goodman, R.M.16
-
38
-
-
0016164905
-
Regulation of glycerol catabolism in Klebsiella aerogenes
-
Ruch, F. E., J. Lengeler, and E. C. C. Lin. 1974. Regulation of glycerol catabolism in Klebsiella aerogenes. J. Bacteriol. 119:50-56.
-
(1974)
J. Bacteriol.
, vol.119
, pp. 50-56
-
-
Ruch, F.E.1
Lengeler, J.2
Lin, E.C.C.3
-
39
-
-
0026574191
-
Cloning and sequencing of the alcohol oxidase-encoding gene (AOD1) from the formaldehyde-producing asporogenous methylotrophic yeast Candida boidinii S2
-
Sakai, Y., and Y. Tani. 1992. Cloning and sequencing of the alcohol oxidase-encoding gene (AOD1) from the formaldehyde-producing asporogenous methylotrophic yeast Candida boidinii S2. Gene 114:67-73.
-
(1992)
Gene
, vol.114
, pp. 67-73
-
-
Sakai, Y.1
Tani, Y.2
-
41
-
-
0024335548
-
Anaerobic growth of Escherichia coli on glycerol by importing genes of the dha regulon from Klebsiella pneumoniae
-
Sprenger, G. A., B. A Hammer, E. A. Johnson, and E. C. C. Lin. 1989. Anaerobic growth of Escherichia coli on glycerol by importing genes of the dha regulon from Klebsiella pneumoniae. J. Gen. Microbiol. 135:1255-1262.
-
(1989)
J. Gen. Microbiol.
, vol.135
, pp. 1255-1262
-
-
Sprenger, G.A.1
Hammer, B.A.2
Johnson, E.A.3
Lin, E.C.C.4
-
42
-
-
0014499841
-
Ferrous-activated nicotinamide adenine dinucleotide-linked dehydrogenase from a mutant of Escherichia coli capable of growth on 1,2-propanediol
-
Sridhara, S., T. T. Wu, T. M. Chused, and E. C. C. Lin. 1969. Ferrous-activated nicotinamide adenine dinucleotide-linked dehydrogenase from a mutant of Escherichia coli capable of growth on 1,2-propanediol. J. Bacteriol. 98:87-95.
-
(1969)
J. Bacteriol.
, vol.98
, pp. 87-95
-
-
Sridhara, S.1
Wu, T.T.2
Chused, T.M.3
Lin, E.C.C.4
-
43
-
-
0017854417
-
Purification and some properties of glycerol dehydrogenase from Erwinia aroideae
-
Sugiura, M., T. Oikawa, K. Hirano, H. Shimizu, and F. Hirata. 1978. Purification and some properties of glycerol dehydrogenase from Erwinia aroideae. Chem. Pharm. Bull 26:716-721.
-
(1978)
Chem. Pharm. Bull.
, vol.26
, pp. 716-721
-
-
Sugiura, M.1
Oikawa, T.2
Hirano, K.3
Shimizu, H.4
Hirata, F.5
-
44
-
-
0026652564
-
Progressive sequence alignment and molecular evolution of the Zn-containing alcohol dehydrogenase family
-
Sun, H.-W., and B. V. Plapp. 1992. Progressive sequence alignment and molecular evolution of the Zn-containing alcohol dehydrogenase family. J. Mol. Evol. 34:522-535.
-
(1992)
J. Mol. Evol.
, vol.34
, pp. 522-535
-
-
Sun, H.-W.1
Plapp, B.V.2
-
45
-
-
0025249190
-
Utilization of glycerol as hydrogen acceptor by Lactobacillus reuteri: Purification of 1,3-propanediol:NAD+ oxidoreductase
-
Talarico, T. L., L. T. Axelsson, J. Novotny, M. Fiuzat, and W. J. Dobrogosz. 1990. Utilization of glycerol as hydrogen acceptor by Lactobacillus reuteri: purification of 1,3-propanediol:NAD+ oxidoreductase. Appl. Environ. Microbiol. 56:943-948.
-
(1990)
Appl. Environ. Microbiol.
, vol.56
, pp. 943-948
-
-
Talarico, T.L.1
Axelsson, L.T.2
Novotny, J.3
Fiuzat, M.4
Dobrogosz, W.J.5
-
46
-
-
0036163017
-
Efficient molecular cloning of environmental DNA from geothermal sediments
-
Wilkinson, D. E., T. Jeanicke, and D. A. Cowan. 2002. Efficient molecular cloning of environmental DNA from geothermal sediments. Biotechnol. Lett. 24:155-161.
-
(2002)
Biotechnol. Lett.
, vol.24
, pp. 155-161
-
-
Wilkinson, D.E.1
Jeanicke, T.2
Cowan, D.A.3
-
47
-
-
0344774501
-
Formation of glycerol dehydrogenase by microorganisms
-
Yamada, H., A. Nagao, H. Nishise, and Y. Tani. 1982. Formation of glycerol dehydrogenase by microorganisms. Agric. Biol. Chem. 46:2325-2331.
-
(1982)
Agric. Biol. Chem.
, vol.46
, pp. 2325-2331
-
-
Yamada, H.1
Nagao, A.2
Nishise, H.3
Tani, Y.4
|