-
1
-
-
0026690379
-
Redesigned purification yields a fully functional PutA protein dimer from Escherichia coli
-
Brown, E. & Wood, J.M. Redesigned purification yields a fully functional PutA protein dimer from Escherichia coli. J. Biol. Chem. 267, 13086-13092 (1992).
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 13086-13092
-
-
Brown, E.1
Wood, J.M.2
-
2
-
-
0019777101
-
Purification of the putA gene product
-
Menzel, R. & Roth, J. Purification of the putA gene product. J. Biol. Chem. 256, 9755-9761 (1981).
-
(1981)
J. Biol. Chem.
, vol.256
, pp. 9755-9761
-
-
Menzel, R.1
Roth, J.2
-
3
-
-
0018168502
-
Membrane-bound proline dehydrogenase from Escherichia coli
-
Scarpulla, R.C. & Soffer, R.L. Membrane-bound proline dehydrogenase from Escherichia coli. J. Biol. Chem. 253, 5997-6001 (1978).
-
(1978)
J. Biol. Chem.
, vol.253
, pp. 5997-6001
-
-
Scarpulla, R.C.1
Soffer, R.L.2
-
4
-
-
0020531146
-
Regulation of proline utilization in Salmonella typhimurium: Characterization of put:Mu L(Ap, lac) operon fusions
-
Maloy, S. & Roth, J.R. Regulation of proline utilization in Salmonella typhimurium: characterization of put:Mu L(Ap, lac) operon fusions. J. Bacteriol. 154, 561-568 (1983).
-
(1983)
J. Bacteriol.
, vol.154
, pp. 561-568
-
-
Maloy, S.1
Roth, J.R.2
-
5
-
-
0019454689
-
Regulation of genes for proline utilization in Salmonella typhimurium: Autogenous repression by the putA gene product
-
Menzel, R. & Roth, J. Regulation of genes for proline utilization in Salmonella typhimurium: autogenous repression by the putA gene product. J. Mol. Biol. 148, 21-44 (1981).
-
(1981)
J. Mol. Biol.
, vol.148
, pp. 21-44
-
-
Menzel, R.1
Roth, J.2
-
6
-
-
0019862229
-
Genetics of L-proline utilization in Eschericia coli
-
Wood, J.M. Genetics of L-proline utilization in Eschericia coli. J. Bacteriol. 146, 895-901 (1981).
-
(1981)
J. Bacteriol.
, vol.146
, pp. 895-901
-
-
Wood, J.M.1
-
7
-
-
0035901522
-
Redox properties of the PutA protein from Escherichia coli and the influence of the flavin redox state on PutA-DNA interactions
-
Becker, D.F. & Thomas, E.A. Redox properties of the PutA protein from Escherichia coli and the influence of the flavin redox state on PutA-DNA interactions. Biochemistry 40, 4714-4722 (2001).
-
(2001)
Biochemistry
, vol.40
, pp. 4714-4722
-
-
Becker, D.F.1
Thomas, E.A.2
-
8
-
-
0027294788
-
PutA protein, a membrane-associated flavin dehydrogenase, acts as a redox-dependent transcriptional regulator
-
Ostrovsky de Spicer, P. & Maloy, S. PutA protein, a membrane-associated flavin dehydrogenase, acts as a redox-dependent transcriptional regulator. Proc. Natl. Acad. Sci. USA. 90, 4295-4298 (1993).
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 4295-4298
-
-
Ostrovsky de Spicer, P.1
Maloy, S.2
-
9
-
-
0032852996
-
Regulation of flavin dehydrogenase compartmentalization: Requirements for PutA-membrane association in Salmonella typhimurium
-
Surber, M.W. & Maloy, S. Regulation of flavin dehydrogenase compartmentalization: requirements for PutA-membrane association in Salmonella typhimurium. Biochim. Biophys. Acta 1421, 5-18 (1999).
-
(1999)
Biochim. Biophys. Acta
, vol.1421
, pp. 5-18
-
-
Surber, M.W.1
Maloy, S.2
-
10
-
-
0005034336
-
Membrane association of proline dehydrogenase in Escherichia coli is redox dependent
-
Wood, J. Membrane association of proline dehydrogenase in Escherichia coli is redox dependent. Proc. Natl. Acad. Sci. USA 84, 373-377 (1987).
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 373-377
-
-
Wood, J.1
-
11
-
-
0030930366
-
Vogelstein, 8. A model for p53-induced apoptosis
-
Polyak, K., Xia, Y., Zweier, J.L., Kinzler, K.W. & Vogelstein, 8. A model for p53-induced apoptosis. Nature 389, 300-305 (1997).
-
(1997)
Nature
, vol.389
, pp. 300-305
-
-
Polyak, K.1
Xia, Y.2
Zweier, J.L.3
Kinzler, K.W.4
-
12
-
-
0035266127
-
Proline oxidase, encoded by p53-induced gene-6, catalyzes the generation of proline-dependent reactive oxygen species
-
Donald, S.P. et al. Proline oxidase, encoded by p53-induced gene-6, catalyzes the generation of proline-dependent reactive oxygen species. Cancer Res. 61, 1810-1815 (2001).
-
(2001)
Cancer Res.
, vol.61
, pp. 1810-1815
-
-
Donald, S.P.1
-
13
-
-
0842326677
-
Genetic variation at the 22q11 PRODH2/DGCR 6 locus presents an unusual pattern and increases susceptibility to schizophrenia
-
Liu, H. et al. Genetic variation at the 22q11 PRODH2/DGCR6 locus presents an unusual pattern and increases susceptibility to schizophrenia. Proc. Natl. Acad. Sci. USA 99, 3717-3722 (2002).
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 3717-3722
-
-
Liu, H.1
-
14
-
-
0037117578
-
A compelling genetic hypothesis for a complex disease: PRODH2/DGCR 6 variation leads to schizophrenia susceptibility
-
Chakravarti, A. A compelling genetic hypothesis for a complex disease: PRODH2/DGCR6 variation leads to schizophrenia susceptibility. Proc. Natl. Acad. Sci. USA 99, 4755-4756 (2002).
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 4755-4756
-
-
Chakravarti, A.1
-
15
-
-
0037150106
-
Electrochemical and functional characterization of the proline dehydrogenase domain of the PutA flavoprotein from Escherichia coli
-
Vinod, M.P., Bellur, P. & Becker, D.F. Electrochemical and functional characterization of the proline dehydrogenase domain of the PutA flavoprotein from Escherichia coli Biochemistry 41, 6525-6532 (2002).
-
(2002)
Biochemistry
, vol.41
, pp. 6525-6532
-
-
Vinod, M.P.1
Bellur, P.2
Becker, D.F.3
-
16
-
-
0028117603
-
Sequence analysis edentifies the proline dehydrogenase and pyrroline-5-carboxylate dehydrogenase domains of the multifunctional Escherichia coli PutA protein
-
Ling, M., Allen, S.W. & Wood, J.M. Sequence analysis edentifies the proline dehydrogenase and pyrroline-5-carboxylate dehydrogenase domains of the multifunctional Escherichia coli PutA protein. J. Mol. Biol. 245, 950-956 (1994).
-
(1994)
J. Mol. Biol.
, vol.245
, pp. 950-956
-
-
Ling, M.1
Allen, S.W.2
Wood, J.M.3
-
17
-
-
0028865843
-
3D domain swapping: A mechanism for oligomer assembly
-
Bennett, M.J., Schlunegger, M.P. & Eisenberg, D. 3D domain swapping: a mechanism for oligomer assembly. Protein Sci. 4, 2455-2468 (1995).
-
(1995)
Protein Sci.
, vol.4
, pp. 2455-2468
-
-
Bennett, M.J.1
Schlunegger, M.P.2
Eisenberg, D.3
-
18
-
-
0032895522
-
The structure and properties of methylenetetrahydrofolate reductase from Escherichia coli suggest how folate ameliorates human hyperhomocysteinemia
-
Guenther, B.D. et al. The structure and properties of methylenetetrahydrofolate reductase from Escherichia coli suggest how folate ameliorates human hyperhomocysteinemia. Nat. Struct. Biol. 6, 359-365 (1999).
-
(1999)
Nat. Struct. Biol.
, vol.6
, pp. 359-365
-
-
Guenther, B.D.1
-
19
-
-
0033741877
-
The X-ray structure of D-amino acid oxidase at very high resolution identifies the chemical mechanism of flavin-dependent substrate dehydrogenation
-
Umhau, S. et al. The X-ray structure of D-amino acid oxidase at very high resolution identifies the chemical mechanism of flavin-dependent substrate dehydrogenation. Proc. Natl. Acad. Sci. USA 97, 12463-12468 (2000).
-
(2000)
Proc. Natl. Acad. Sci.USA
, vol.97
, pp. 12463-12468
-
-
Umhau, S.1
-
20
-
-
0029839452
-
Crystal structure of D-amino acid oxidase: A case of active site mirror-image convergent evolution with flavocytochrome b2
-
Mattevi, A. et al. Crystal structure of D-amino acid oxidase: a case of active site mirror-image convergent evolution with flavocytochrome b2. Proc. Natl. Acad. Sci. USA 93, 7496-7501 (1996).
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 7496-7501
-
-
Mattevi, A.1
-
21
-
-
0031054686
-
On the mechanism of D-amino acid oxidase. Structure/linear free energy correlations and deuterium kinetic isotope effects using substituted phenylglycines
-
Pollegioni, L., Blodig, W. & Ghisla, S. On the mechanism of D-amino acid oxidase. Structure/linear free energy correlations and deuterium kinetic isotope effects using substituted phenylglycines. J. Biol. Chem. 272, 4924-4934 (1997).
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 4924-4934
-
-
Pollegioni, L.1
Blodig, W.2
Ghisla, S.3
-
22
-
-
0034722962
-
Nitrogen isotope effects as probes of the mechanism of D-amino acid oxidase
-
Kurtz, K.A., Rishavy, M.A., Cleland, W.W. & Fitzpatrick, P.F. Nitrogen isotope effects as probes of the mechanism of D-amino acid oxidase. J. Am. Chem. Soc. 122, 12896-12897 (2000).
-
(2000)
J. Am. Chem. Soc.
, vol.122
, pp. 12896-12897
-
-
Kurtz, K.A.1
Rishavy, M.A.2
Cleland, W.W.3
Fitzpatrick, P.F.4
-
23
-
-
0032526547
-
The PutA protein of Salmonella typhimurium catalyzes the two steps of proline degradation via a leaky channel
-
Surber, M.W. & Maloy, S. The PutA protein of Salmonella typhimurium catalyzes the two steps of proline degradation via a leaky channel. Arch. Biochem. Biophys. 354, 281-287 (1998).
-
(1998)
Arch. Biochem. Biophys.
, vol.354
, pp. 281-287
-
-
Surber, M.W.1
Maloy, S.2
-
24
-
-
0027440362
-
Protein structure comparison by alignment of distance matrices
-
Holm, L. & Sander, C. Protein structure comparison by alignment of distance matrices. J. Mol. Biol. 233, 123-138 (1993).
-
(1993)
J. Mol. Biol.
, vol.233
, pp. 123-138
-
-
Holm, L.1
Sander, C.2
-
25
-
-
0033745991
-
The trans-activation domain of the sporulation response regulator Spo0A revealed by X-ray crystallography
-
Lewis, R.J. et al. The trans-activation domain of the sporulation response regulator Spo0A revealed by X-ray crystallography. Mol. Microbiol. 38, 198-212 (2000).
-
(2000)
Mol. Microbiol.
, vol.38
, pp. 198-212
-
-
Lewis, R.J.1
-
26
-
-
0029736725
-
Structure of the Escherichia coli response regulator NarL
-
Baikalov, I. et al. Structure of the Escherichia coli response regulator NarL. Biochemistry 35, 11053-11061 (1996).
-
(1996)
Biochemistry
, vol.35
, pp. 11053-11061
-
-
Baikalov, I.1
-
27
-
-
0033634866
-
Structure and function of Cdc6/Cdc18: Implications for origin recognition and checkpoint control
-
Liu, J. et al. Structure and function of Cdc6/Cdc18: implications for origin recognition and checkpoint control. Mol. Cell. 6, 637-648 (2000).
-
(2000)
Mol. Cell.
, vol.6
, pp. 637-648
-
-
Liu, J.1
-
28
-
-
0024383444
-
Structural basis of DNA-protein recognition
-
Brennan, R.G. & Matthews, B.W. Structural basis of DNA-protein recognition. Trends. Biochem. Sci. 1989, 286-290 (1989).
-
(1989)
Trends. Biochem. Sci.
, vol.1989
, pp. 286-290
-
-
Brennan, R.G.1
Matthews, B.W.2
-
29
-
-
0035211884
-
Crystallization and preliminary crystallographic analysis of the proline dehydrogenase domain of the multifunctional PutA flavoprotein from Escherichia coli
-
Nadarala, S., Lee, Y.H., Becker, D.F. & Tanner, J.J. Crystallization and preliminary crystallographic analysis of the proline dehydrogenase domain of the multifunctional PutA flavoprotein from Escherichia coli. Acta Crystallogr. D 57, 1925-1927 (2001).
-
(2001)
Acta Crystallogr. D
, vol.57
, pp. 1925-1927
-
-
Nadarala, S.1
Lee, Y.H.2
Becker, D.F.3
Tanner, J.J.4
-
30
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski, Z. & Minor, W. Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 276, 307-326 (1997).
-
(1997)
Methods Enzymol.
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
31
-
-
0028103275
-
The CCP4 suite: Programs for protein crystallography
-
Collaborative Computational Project, Number 4. The CCP4 suite: programs for protein crystallography. Acta Crystallogr. D 50, 760-763 (1994).
-
(1994)
Acta Crystallogr. D
, vol.50
, pp. 760-763
-
-
-
32
-
-
84889120137
-
Improved methods for building protein models in electron density maps and the location of errors in these models
-
Jones, T.A., Zou, J.-Y., Cowan, S.W. & Kjeldgaard, M. Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr. A 47, 110-119 (1991).
-
(1991)
Acta Crystallogr. A
, vol.47
, pp. 110-119
-
-
Jones, T.A.1
Zou, J.-Y.2
Cowan, S.W.3
Kjeldgaard, M.4
-
34
-
-
0001486532
-
L-(+)-Lactate
-
eds. Bergmeyer, J. & Grassl, M. Chap. 3.12, Verlag Chemie, Weinheim; Deerfield Beach
-
Noll, F. L-(+)-Lactate. in Methods of Enzymatic Analysis, Vol. 6 (eds. Bergmeyer, J. & Grassl, M.) Chap. 3.12, 582-588 (Verlag Chemie, Weinheim; Deerfield Beach; 1983).
-
(1983)
Methods of Enzymatic Analysis
, vol.6
, pp. 582-588
-
-
Noll, F.1
-
35
-
-
0000243829
-
PROCHECK a program to check the stereochemical quality of protein structures
-
Laskowski, R.A., MacArthur, M.W., Moss, D.S. & Thornton, J.M. PROCHECK: a program to check the stereochemical quality of protein structures. J. Appl. Crystallogr. 26, 283-291 (1993).
-
(1993)
J. Appl. Crystallogr.
, vol.26
, pp. 283-291
-
-
Laskowski, R.A.1
MacArthur, M.W.2
Moss, D.S.3
Thornton, J.M.4
-
36
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
Brunger, A.T. et al. Crystallography & NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr. D 54, 905-921 (1998).
-
(1998)
Acta Crystallogr. D
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
-
37
-
-
0026244229
-
MOLSCRIPT a program to produce both detailed and schematic plots of protein structures
-
Kraulis, RJ. MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures. J. Appl. Crystallogr. 24, 946-950 (1991).
-
(1991)
J. Appl. Crystallogr.
, vol.24
, pp. 946-950
-
-
Kraulis, R.J.1
-
38
-
-
0028057108
-
Raster3D version 2.0: A program for photorealistic molecular graphics
-
Merritt, E.A. & Murphy, M.E.P. Raster3D version 2.0: a program for photorealistic molecular graphics. Acta Crystallogr. D 50, 869-873 (1994).
-
(1994)
Acta Crystallogr. D
, vol.50
, pp. 869-873
-
-
Merritt, E.A.1
Murphy, M.E.P.2
-
39
-
-
84944812409
-
Improved Fourier coefficients for maps using phases from partial structures with errors
-
Read, R.J. Improved Fourier coefficients for maps using phases from partial structures with errors. Acta Crystallogr. A 42, 140-149 (1986).
-
(1986)
Acta Crystallogr. A
, vol.42
, pp. 140-149
-
-
Read, R.J.1
-
40
-
-
0030729838
-
An extensively modified version of MolScript that includes greatly enhanced coloring capabilities
-
Esnouf, R.M. An extensively modified version of MolScript that includes greatly enhanced coloring capabilities. J. Mol. Graph. Model. 15, 132-134 (1997).
-
(1997)
J. Mol. Graph. Model.
, vol.15
, pp. 132-134
-
-
Esnouf, R.M.1
|