Visualizing RNA molecules inside the nucleus of living cells

Methods

Volumn 29, Issue 1, 2003, Pages 51-57

  Dirks, Roeland W ^a   Molenaar, Chris ^a   Tanke, Hans J ^a  

^a LEIDEN UNIVERSITY MEDICAL CENTER   (Netherlands)

Author keywords

2 O methyl RNA; Fluorescence resonance energy transfer; In vivo hybridization; Live cell imaging; Living cell; Microinjection; Molecular beacon; Oligodeoxynucleotides; Peptide nucleic acid; RNA fluorescence in situ hybridization

Indexed keywords

2' O METHYLOLIGORIBONUCLEOTIDE; FLUOROCHROME; HYBRID PROTEIN; NUCLEASE; NUCLEIC ACID; OLIGODEOXYNUCLEOTIDE; OLIGORIBONUCLEOTIDE; RNA; UNCLASSIFIED DRUG;

ANALYTIC METHOD; ARTICLE; CELL ACTIVITY; CELL FUNCTION; CELL NUCLEUS; FLUORESCENCE; FLUORESCENCE MICROSCOPY; IN SITU HYBRIDIZATION; MICROINJECTION; MICROSCOPY; NONHUMAN; OLIGONUCLEOTIDE PROBE; PHOTOACTIVATION; PRIORITY JOURNAL; RNA DEGRADATION; RNA ISOLATION; RNA PROBE; RNA STRUCTURE;

ANIMALS; CELL NUCLEUS; FLUORESCENCE RESONANCE ENERGY TRANSFER; HUMANS; IN SITU HYBRIDIZATION, FLUORESCENCE; RNA;

EID: 0037282642     PISSN: 10462023     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1046-2023(02)00290-6     Document Type: Article

References (37)

1. van de Corput M.P.C., Dirks R.W., van Gijlswijk R.P.M., van Binnendijk E., Hattinger C.M., de Paus R.A., Landegent J.E., Raap A.K. J. Histochem. Cytochem. 46:1998;1249-1259.
2. Femino A.M., Fay F.S., Fogarty K., Singer R.H. Science. 280:1998;585-590.
3. Levsky J.M., Shenoy S.M., Pezo R.C., Singer R.H. Science. 297:2002;836-840.
4. Misteli T., Caceres J.F., Spector D.L. Nature. 387:1997;523-527.
5. Dirks R.W., Hattinger C.M., Molenaar C., Snaar S.P. Crit. Rev. Eukaryot. Gene Exp. 9:1999;191-201.
6. Smith K.P., Moen P.T., Wydner K.L., Coleman J.R., Lawrence J.B. J. Cell Biol. 144:1999;617-629.
7. Phair R.D., Misteli T. Nature. 404:2000;604-609.
8. Dirks R.W., Molenaar C., Tanke H.J. Histochem. Cell Biol. 115:2001;3-11.
9. Pederson T. Nucleic Acids Res. 29:2001;1013-1016.
10. Knowles R.B., Sabry J.H., Martone M.E., Deerinck T.J., Ellisman M.H., Bassell G.J., Kosik K.S. J. Neurosci. 16:1996;7812-7820.
11. Wang J., Cao L.-G., Wang Y.-L., Pederson T. Proc. Natl. Acad. Sci. USA. 88:1991;7391-7395.
12. Melcak I., Cermanova S., Kopsky V., Vecerova V., Raska I. Mol. Biol. Cell. 12:2001;393-406.
13. Kopsky V., Vecerova J., Melcak I., Pliss A., Stulik J., Koberna K., Tomaskova L., Raska I. Fol. Biol. 48:2002;69-72.
14. Dreyfuss G., Kim V.N., Kataoka N. Nat. Rev. Mol. Cell Biol. 3:2002;195-205.
15. Bertrand E., Chartrand P., Schaefer M., Shenoy S.M., Singer R.H., Long R.M. Mol. Cell. 2:1998;437-445.
16. Calado A., Kutay U., Kuhn U., Wahle E., Carmo-Fonseca M. RNA. 6:2000;245-256.
17. Kamath R.V., Leary D.J., Huang S. Mol. Cell Biol. 12:2001;3808-3820.
18. McNeil P.L., Werder E. J. Cell Sci. 88:1987;669-678.
19. Barry E.L.R., Gesek F.A., Friedman P.A. Biotechniques. 15:1993;1016-1018.
20. Hagstrom J.E., Ludtke J.J., Bassik M.C., Sebestyen M.G., Adam S.A., Wolff J.A. J. Cell Sci. 110:1997;2323-2331.
21. Fisher T.L., Terhorst T., Cao X., Wagner R.W. Nucleic Acids Res. 21:1993;3857-3865.
22. Leonetti J.P., Mechti N., Degols G., Gagnor C., Lebleu B. Proc. Natl. Acad. Sci. USA. 88:1991;2702-2706.
23. Molenaar C., Marras S.A., Slats J.C.M., Truffert J.-C., Lemaitre M., Raap A.K., Dirks R.W., Tanke H.J. Nucleic Acids Res. 29:2001;e89.
24. Sproat B.S., Lamond A.I., Beijer B., Neuer P., Ryder U. Nucleic Acids Res. 17:1989;3373-3386.
25. Majlessi M., Nelson N.C., Becker M.M. Nucleic Acids Res. 26:1998;2224-2229.
26. Carmo-Fonseca M., Pepperkok R., Sproat B.S., Ansorge W., Swanson M.S., Lamond A.I. EMBO J. 10:1991;1863-1873.
27. Nielsen P.E. Curr. Opin. Struct. Biol. 9:1999;353-357.
28. Tyagi S., Kramer R. Nat. Biotechnol. 14:1996;303-308.
29. Szuhai K., van den Ouweland J.M., Dirks R.W., Lemaitre M., Truffert J.-C., Janssen G.M., Tanke H.J., Holme E., Maassen J.A., Raap A.K. Nucleic Acids Res. 29:2001;e13.
30. Sokol D.L., Zhang X., Lu P., Gewirtz A.M. Proc. Natl. Acad. Sci. USA. 95:1998;11538-11543.
31. Perlette J., Tan W. Anal. Chem. 73:2001;5544-5550.
32. Tsuji A., Koshimoto H., Sato Y., Hirano M., Sei-Iida Y., Kondo S., Ishibashi K. Biophys. J. 78:2000;3260-3274.
33. Tsuji A., Sato Y., Hirano M., Suga T., Koshimoto H., Taguchi T., Ohsuka S. Biophys. J. 81:2001;501-515.
34. Paillasson S., van de Corput M., Dirks R.W., Tanke H.J., Robert-Nicoud M., Ronot X. Exp. Cell Res. 231:1997;226-233.
35. Dirks R.W., van de Rijke F.M., Fujishita S., van der Ploeg M., Raap A.K. J. Cell Sci. 104:1993;1187-1197.
36. Iribarren A.M., Sproat B.S., Neuner P., Sulston I., Ryder U., Lamond A.I. Proc. Natl. Acad. Sci. USA. 87:1990;7747-7751.
37. Politz J.C., Tuft R.A., Pederson T., Singer R.H. Curr. Biol. 9:1999;285-291.