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Volumn 64, Issue 9, 1998, Pages 3480-3485

Identification and activities in situ of Nitrosospira and Nitrospira spp. as dominant populations in a nitrifying fluidized bed reactor

Author keywords

[No Author keywords available]

Indexed keywords

AMMONIA; NITRIC OXIDE; OXYGEN; RIBOSOME RNA;

EID: 0031684927     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/aem.64.9.3480-3485.1998     Document Type: Article
Times cited : (399)

References (36)
  • 2
    • 0025294528 scopus 로고
    • Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations
    • Amann, R. I., B. J. Binder, R. J. Olson, S. W. Chisholm, R. Devereux, and D. A. Stahl. 1990. Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Appl. Environ. Microbiol. 56:1919-1925.
    • (1990) Appl. Environ. Microbiol. , vol.56 , pp. 1919-1925
    • Amann, R.I.1    Binder, B.J.2    Olson, R.J.3    Chisholm, S.W.4    Devereux, R.5    Stahl, D.A.6
  • 3
    • 0025099312 scopus 로고
    • Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environtar mental studies in microbiology
    • Amann, R. I., L. Krumholz, and D. A. Stahl. 1990. Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environtar mental studies in microbiology. J. Bacteriol. 172:762-770.
    • (1990) J. Bacteriol. , vol.172 , pp. 762-770
    • Amann, R.I.1    Krumholz, L.2    Stahl, D.A.3
  • 4
    • 0028946084 scopus 로고
    • Phylogenetic identification and in situ detection of individual microbial cells without cultivation
    • Amann, R. I., W. Ludwig, and K. H. Schleifer. 1995. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59:143-169.
    • (1995) Microbiol. Rev. , vol.59 , pp. 143-169
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.H.3
  • 5
    • 0001818828 scopus 로고
    • R- And k-selection and microbial ecology
    • Andrews, J. H., and R. F. Harris. 1986. r- and k-selection and microbial ecology. Adv. Microb. Ecol. 9:99-147.
    • (1986) Adv. Microb. Ecol. , vol.9 , pp. 99-147
    • Andrews, J.H.1    Harris, R.F.2
  • 6
    • 0018401930 scopus 로고
    • Population ecology of nitrifying bacteria
    • Belser, L. W. 1979. Population ecology of nitrifying bacteria. Annu. Rev. Microbiol. 33:309-333.
    • (1979) Annu. Rev. Microbiol. , vol.33 , pp. 309-333
    • Belser, L.W.1
  • 7
    • 0000407465 scopus 로고
    • The genus Nitrobacter and related genera
    • A. Balows, H. G. Trüper, M. Dworkin, W. Harder, and K.-H. Schleifer (ed.). Springer-Verlag, New York, N.Y.
    • Bock, E., and H.-P. Koops. 1992. The genus Nitrobacter and related genera, p. 2302-2309. In A. Balows, H. G. Trüper, M. Dworkin, W. Harder, and K.-H. Schleifer (ed.), The prokaryotes, 2nd ed. Springer-Verlag, New York, N.Y.
    • (1992) The Prokaryotes, 2nd Ed , pp. 2302-2309
    • Bock, E.1    Koops, H.-P.2
  • 8
    • 0029025721 scopus 로고
    • Bacterial community structure of phosphate-removing and non-phosphate-removing activated sludges from sequencing batch reactors
    • Bond, P. L., P. Hugenholtz, J. Keller, and L. L. Blackall. 1995. Bacterial community structure of phosphate-removing and non-phosphate-removing activated sludges from sequencing batch reactors. Appl. Environ. Microbiol. 61:1910-1916.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 1910-1916
    • Bond, P.L.1    Hugenholtz, P.2    Keller, J.3    Blackall, L.L.4
  • 9
    • 0019513663 scopus 로고
    • Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli
    • Brosius, J., T. J. Dull, D. D. Sleeter, and H. F. Noller. 1981. Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. J. Mol. Biol. 148:107-127.
    • (1981) J. Mol. Biol. , vol.148 , pp. 107-127
    • Brosius, J.1    Dull, T.J.2    Sleeter, D.D.3    Noller, H.F.4
  • 11
    • 0027476683 scopus 로고
    • Microelectrode measurements of the activity distribution in nitrifying bacterial aggregates
    • de Beer, D., J. C. van den Heuvel, and S. P. P. Ottengraf. 1993. Microelectrode measurements of the activity distribution in nitrifying bacterial aggregates. Appl. Environ. Microbiol. 59:573-579.
    • (1993) Appl. Environ. Microbiol. , vol.59 , pp. 573-579
    • De Beer, D.1    Van Den Heuvel, J.C.2    Ottengraf, S.P.P.3
  • 12
    • 0029018038 scopus 로고
    • Detection and counting of Nitrobacter populations in soil by PCR
    • Degrange, V., and R. Bardin. 1995. Detection and counting of Nitrobacter populations in soil by PCR. Appl. Environ. Microbiol. 61:2093-2098.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 2093-2098
    • Degrange, V.1    Bardin, R.2
  • 13
    • 0029121005 scopus 로고
    • A new obligately chemolithoautotrophic, nitrite-oxidizing bacterium, Nitrospira moscoviensis sp. nov., and its phylogenetic relationship
    • Ehrich, S., D. Behrens, E. Lebedeva, W. Ludwig, and E. Bock. 1995. A new obligately chemolithoautotrophic, nitrite-oxidizing bacterium, Nitrospira moscoviensis sp. nov., and its phylogenetic relationship. Arch. Microbiol. 164:16-23.
    • (1995) Arch. Microbiol. , vol.164 , pp. 16-23
    • Ehrich, S.1    Behrens, D.2    Lebedeva, E.3    Ludwig, W.4    Bock, E.5
  • 14
    • 0027184336 scopus 로고
    • The phylogeny of autotrophic ammonia-oxidizing bacteria as determined by analysis of 16S ribosomal gene sequences
    • Head, I. M., W. D. Hiorns, T. M. Embley, A. J. McCarthy, and J. R. Saunders. 1993. The phylogeny of autotrophic ammonia-oxidizing bacteria as determined by analysis of 16S ribosomal gene sequences. J. Gen. Microbiol 139:1147-1153.
    • (1993) J. Gen. Microbiol , vol.139 , pp. 1147-1153
    • Head, I.M.1    Hiorns, W.D.2    Embley, T.M.3    McCarthy, A.J.4    Saunders, J.R.5
  • 15
    • 0028883636 scopus 로고
    • Amplification of 16S ribosomal RNA genes of autotrophic ammonia-oxidizing bacteria demonstrates the ubiquity of nitrosospiras in the environment
    • Hiorns, W. D., R. C. Hastings, I. M. Head, A. J. McCarthy, J. R. Saunders, R. W. Pickup, and G. H. Hall. 1995. Amplification of 16S ribosomal RNA genes of autotrophic ammonia-oxidizing bacteria demonstrates the ubiquity of nitrosospiras in the environment. Microbiology 141:2793-2800.
    • (1995) Microbiology , vol.141 , pp. 2793-2800
    • Hiorns, W.D.1    Hastings, R.C.2    Head, I.M.3    McCarthy, A.J.4    Saunders, J.R.5    Pickup, R.W.6    Hall, G.H.7
  • 16
    • 0029669586 scopus 로고    scopus 로고
    • Comparative analysis of nitrifying bacteria associated with freshwater and marine aquaria
    • Hovanec, T. A., and E. F. DeLong. 1996. Comparative analysis of nitrifying bacteria associated with freshwater and marine aquaria. Appl. Environ. Microbiol. 62:2888-2896.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 2888-2896
    • Hovanec, T.A.1    Delong, E.F.2
  • 17
    • 0031975148 scopus 로고    scopus 로고
    • Nitrospira-like bacteria associated with nitrite oxidation in freshwater aquaria
    • Hovanec, T. A., L. T. Taylor, A. Blakis, and E. F. Delong. 1998. Nitrospira-like bacteria associated with nitrite oxidation in freshwater aquaria. Appl. Environ. Microbiol. 64:258-264.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 258-264
    • Hovanec, T.A.1    Taylor, L.T.2    Blakis, A.3    Delong, E.F.4
  • 18
    • 0030901922 scopus 로고    scopus 로고
    • Analysis of ammonia-oxidizing bacteria of the β subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified 16S ribosomal DNA fragments
    • Kowalchuk, G. A., J. R. Stephen, W. de Boer, J. I. Presser, T. M. Embley, and J. W. Woldendorp. 1997. Analysis of ammonia-oxidizing bacteria of the β subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified 16S ribosomal DNA fragments. Appl. Environ. Microbiol. 63:1489-1497.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 1489-1497
    • Kowalchuk, G.A.1    Stephen, J.R.2    De Boer, W.3    Presser, J.I.4    Embley, T.M.5    Woldendorp, J.W.6
  • 19
    • 0027068041 scopus 로고
    • Phylogenetic oligodeoxynucleotide probes for the major subclasses of proteobacteria: Problems and solutions
    • Manz, W., R. Amann, W. Ludwig, M. Wagner, and K.-H. Schleifer. 1992. Phylogenetic oligodeoxynucleotide probes for the major subclasses of proteobacteria: problems and solutions. Syst. Appl. Microbiol. 15:593-600.
    • (1992) Syst. Appl. Microbiol. , vol.15 , pp. 593-600
    • Manz, W.1    Amann, R.2    Ludwig, W.3    Wagner, M.4    Schleifer, K.-H.5
  • 20
    • 0028240270 scopus 로고
    • Molecular analysis of enrichment cultures of marine ammonia oxidisers
    • McCaig, A. E., T. M. Embley, and J. I. Prosser. 1994. Molecular analysis of enrichment cultures of marine ammonia oxidisers. FEMS Microbiol. Lett. 120:363-368.
    • (1994) FEMS Microbiol. Lett. , vol.120 , pp. 363-368
    • McCaig, A.E.1    Embley, T.M.2    Prosser, J.I.3
  • 21
    • 0030001221 scopus 로고    scopus 로고
    • Phylogenetic probes for analyzing abundance and spatial organization of nitrifying bacteria
    • Mobarry, B. K., M. Wagner, V. Urbain, B. E. Rittmann, and D. A. Stahl. 1996. Phylogenetic probes for analyzing abundance and spatial organization of nitrifying bacteria. Appl. Environ. Microbiol. 62:2156-2162.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 2156-2162
    • Mobarry, B.K.1    Wagner, M.2    Urbain, V.3    Rittmann, B.E.4    Stahl, D.A.5
  • 22
    • 0001868073 scopus 로고    scopus 로고
    • Denaturing gradient gel electrophoresis (DGGE) in microbial ecology
    • A. D. L. Akkermans, J. D. van Elsas, and F. J. de Bruijn (ed.). Kluwer Academic Publishers, Dordrecht, The Netherlands
    • Muyzer, G., T. Brinkhoff, U. Nübel, C. M. Santegoeds, H. Schäfer, and C. Wawer. 1998. Denaturing gradient gel electrophoresis (DGGE) in microbial ecology, p. 1-27. In A. D. L. Akkermans, J. D. van Elsas, and F. J. de Bruijn (ed.), Molecular microbial ecology manual, supplement 3. Kluwer Academic Publishers, Dordrecht, The Netherlands.
    • (1998) Molecular Microbial Ecology Manual, Supplement , vol.3 , pp. 1-27
    • Muyzer, G.1    Brinkhoff, T.2    Nübel, U.3    Santegoeds, C.M.4    Schäfer, H.5    Wawer, C.6
  • 23
    • 0029097821 scopus 로고
    • Phylogenetic relationships of Thiomicrospira species and their identification in deep-sea hydrothermal vent samples by denaturing gradient gel electrophoresis of 16S rDNA fragments
    • Muyzer, G., A. Teske, C. O. Wirsen, and H. W. Jannasch. 1995. Phylogenetic relationships of Thiomicrospira species and their identification in deep-sea hydrothermal vent samples by denaturing gradient gel electrophoresis of 16S rDNA fragments. Arch. Microbiol. 164:165-172.
    • (1995) Arch. Microbiol. , vol.164 , pp. 165-172
    • Muyzer, G.1    Teske, A.2    Wirsen, C.O.3    Jannasch, H.W.4
  • 24
    • 0024822090 scopus 로고
    • Autotrophic nitrification in bacteria
    • Prasser, J. I. 1989. Autotrophic nitrification in bacteria. Adv. Microb. Physiol. 30:125-181.
    • (1989) Adv. Microb. Physiol. , vol.30 , pp. 125-181
    • Prasser, J.I.1
  • 25
    • 84986767568 scopus 로고
    • An oxygen microelectrode with a guard cathode
    • Revsbech, N. P. 1989. An oxygen microelectrode with a guard cathode. Limnol. Oceanogr. 34:474-478.
    • (1989) Limnol. Oceanogr. , vol.34 , pp. 474-478
    • Revsbech, N.P.1
  • 26
    • 0029659250 scopus 로고    scopus 로고
    • Structure and function of a nitrifying biofilm as determined by in situ hybridization and the use of microelectrodes
    • Schramm, A., L. H. Larsen, N. P. Revsbech, N. B. Ramsing, R. Amann, and K.-H. Schleifer. 1996. Structure and function of a nitrifying biofilm as determined by in situ hybridization and the use of microelectrodes. Appl. Environ. Microbiol. 62:4641-4647.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 4641-4647
    • Schramm, A.1    Larsen, L.H.2    Revsbech, N.P.3    Ramsing, N.B.4    Amann, R.5    Schleifer, K.-H.6
  • 28
    • 0029805297 scopus 로고    scopus 로고
    • Molecular diversity of soil and marine 16S rRNA gene sequences related to β-subgroup ammonia-oxidizing bacteria
    • Stephen, J. R., A. E. McCaig, Z. Smith, J. I. Prosser, and T. M. Embley. 1996. Molecular diversity of soil and marine 16S rRNA gene sequences related to β-subgroup ammonia-oxidizing bacteria. Appl. Environ. Microbiol. 62:4147-4154.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 4147-4154
    • Stephen, J.R.1    McCaig, A.E.2    Smith, Z.3    Prosser, J.I.4    Embley, T.M.5
  • 30
    • 0028079873 scopus 로고
    • Evolutionary relationships among ammonia- And nitrite-oxidizing bacteria
    • Teske, A., E. Aim, J. M. Regan, S. Toze, B. E. Rittman, and D. A. Stahl. 1994. Evolutionary relationships among ammonia- and nitrite-oxidizing bacteria. J. Bacteriol. 176:6623-6630.
    • (1994) J. Bacteriol. , vol.176 , pp. 6623-6630
    • Teske, A.1    Aim, E.2    Regan, J.M.3    Toze, S.4    Rittman, B.E.5    Stahl, D.A.6
  • 31
    • 0028916453 scopus 로고
    • Detection of ammonia-oxidizing bacteria of the beta-subclass of the class Proteobacteria in aquatic samples with the PCR
    • . 31. Voytek, M. A., and B. B. Ward. 1995. Detection of ammonia-oxidizing bacteria of the beta-subclass of the class Proteobacteria in aquatic samples with the PCR. Appl. Environ. Microbiol. 61:1444-1450.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 1444-1450
    • Voytek, M.A.1    Ward, B.B.2
  • 32
    • 0028569160 scopus 로고
    • In situ analysis of microbial consortia in activated sludge using fluorescently labelled, rRNA-targeted oligonucleotide probes and confocal scanning laser microscopy
    • Wagner, M., B. Assmus, A. Hartmann, P. Hutzler, and R. Amann. 1994. In situ analysis of microbial consortia in activated sludge using fluorescently labelled, rRNA-targeted oligonucleotide probes and confocal scanning laser microscopy. J. Microsc. 176:181-187.
    • (1994) J. Microsc. , vol.176 , pp. 181-187
    • Wagner, M.1    Assmus, B.2    Hartmann, A.3    Hutzler, P.4    Amann, R.5
  • 34
    • 0029825018 scopus 로고    scopus 로고
    • In situ analysis of nitrifying bacteria in sewage treatment plants
    • Wagner, M., G. Rath, H.-P. Koops, J. Flood, and R. Amann. 1996. In situ analysis of nitrifying bacteria in sewage treatment plants. Water Sci. Technol. 34:237-244.
    • (1996) Water Sci. Technol. , vol.34 , pp. 237-244
    • Wagner, M.1    Rath, G.2    Koops, H.-P.3    Flood, J.4    Amann, R.5
  • 35
    • 0030942414 scopus 로고    scopus 로고
    • Phylogenetic diversity of natural populations of ammonia oxidizers investigated by specific PCR amplification
    • Ward, B. B., M. A. Voytek, and K.-P. Witzel. 1997. Phylogenetic diversity of natural populations of ammonia oxidizers investigated by specific PCR amplification. Microb. Ecol. 33:87-96.
    • (1997) Microb. Ecol. , vol.33 , pp. 87-96
    • Ward, B.B.1    Voytek, M.A.2    Witzel, K.-P.3
  • 36
    • 0030666834 scopus 로고    scopus 로고
    • Genetic diversity and expression of the [NiFe] hydrogenase large-subumt gene of Desulfovibrio spp. in environmental samples
    • Wawer, C., M. S. M. Jetten, and G. Muyzer. 1997. Genetic diversity and expression of the [NiFe] hydrogenase large-subumt gene of Desulfovibrio spp. in environmental samples. Appl. Environ. Microbiol. 63:4360-4369.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 4360-4369
    • Wawer, C.1    Jetten, M.S.M.2    Muyzer, G.3


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