Filamentous Chloroflexi (green non-sulfur bacteria) are abundant in wastewater treatment processes with biological nutrient removal

Microbiology

Volumn 148, Issue 8, 2002, Pages 2309-2318

  Björnsson, Lovisa ^a   Hugenholtz, Philip ^a   Tyson, Gene W ^a   Blackall, Linda L ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

Author keywords

Activated sludge; Filamentous bacteria; Fluorescence in situ hybridization (FISH); Microbial ecology; Phylogeny

Indexed keywords

DNA 16S; RNA 16S; SULFUR; BACTERIAL DNA;

ACTINOBACTERIA; ACTIVATED SLUDGE; ARTICLE; AUSTRALIA; BACTERIUM; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; CHLOROFLEXI; CONTROLLED STUDY; FLUORESCENCE IN SITU HYBRIDIZATION; GRAM NEGATIVE BACTERIUM; GRAM POSITIVE BACTERIUM; MICROMANIPULATION; MOLECULAR CLONING; MOLECULAR PHYLOGENY; MORPHOTYPE; NONHUMAN; NUCLEOTIDE SEQUENCE; OLIGONUCLEOTIDE PROBE; PHYLUM; PRIORITY JOURNAL; UNINDEXED SEQUENCE; WASTE WATER TREATMENT PLANT; CLASSIFICATION; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; MICROBIOLOGY; MOLECULAR GENETICS; PHYLOGENY; SEWAGE; WASTE MANAGEMENT; WATER MANAGEMENT;

ACTINOBACTERIA; BACTERIA (MICROORGANISMS); BACTEROIDETES; CHLOROFLEXI; CHLOROFLEXI (CLASS); FIRMICUTES; NEGIBACTERIA; POSIBACTERIA; PROTEOBACTERIA; VERRUCOMICROBIA SUBDIVISION 3; VERRUCOMICROBIACEAE;

ACTINOBACTERIA; BACTERIA; BACTERIAL TYPING TECHNIQUES; DNA, BACTERIAL; IN SITU HYBRIDIZATION, FLUORESCENCE; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEWAGE; WASTE MANAGEMENT; WATER PURIFICATION;

EID: 0036667419     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/00221287-148-8-2309     Document Type: Article

References (44)

1. In situ identification of microorganisms by whole cell hybridization with rRNA-targeted nucleic acid probes
2. The identification of microorganisms by fluorescence in situ hybridisation
3. Phylogeny of the filamentous bacterium Eikelboom type 1851, and design and application of a 16S rRNA targeted oligonucleotide for its in situ identification in activated sludge
4. Molecular identification of activated sludge foaming bacteria
5. 'Microthrix parvicella' is a novel, deep branching member of the actinomycetes subphylum
6. Bacterial community structures of phosphate-removing and non-phosphate-removing activated sludges from sequencing batch reactors
7. Molecular characterization of novel red green nonsulfur bacteria from five distinct hot spring communities in Yellowstone National Park
8. Triggers for microbial aggregation in activated sludge
9. 16S rRNA analysis of isolates obtained from Gram-negative, filamentous bacteria micromanipulated from activated sludge
10. Phylogenetic diversity of Archaea and Bacteria in a deep subsurface paleosol
11. Identification of polyphosphate-accumulating organisms and design of 16S rRNA-directed probes for their detection and quantitation
12. The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: Development and evaluation of a more comprehensive probe set
13. A multiple outgroup approach to resolving division-level phylogenetic relationships using 16S rDNA data
14. Phylogenetic stains: Ribosomal RNA-based probes for the identification of single cells
15. Sphaerobacter thermophilus gen. nov., sp. nov., a deeply rooting member of the actinomycetes subdivision isolated from thermophilically treated sewage sludge
16. Survey of filamentous populations in nutrient removal plants in four European countries
17. Development and use of fluorescent in situ hybridization probes for the detection and identification of 'Microthrix parvicella' in activated sludge
18. Chloroflexi phy. nov
19. Previously unknown and phylogenetically diverse members of the green nonsulfur bacteria are indigenous to freshwater lakes
20. Phylogenetic relationships of filamentous sulfur bacteria (Thiothrix spp. and Eikelboom type 021N bacteria) isolated from wastewater-treatment plants and description of Thiothrix eikelboomii sp. nov., Thiothrix unzii Thiothrix fructosivorans sp. nov and Thiothrix defluvii sp. nov
21. The polymerase chain reaction as a tool to investigate microbial diversity in environmental samples
22. Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity
23. Investigation of candidate division TM7, a recently recognized major lineage of the domain bacteria with no known pure-culture representatives
24. Design and evaluation of 16S rRNA-targeted oligonucleotide probes for fluorescence in situ hybridisation
25. The microbial community composition of a nitrifying-denitrifying activated sludge from an industrial sewage treatment plant analyzed by the full-cycle rRNA approach
26. Phylogenetic analysis of and oligonucleotide probe development for Eikelboom Type 021N filamentous bacteria isolated from bulking activated sludge
27. Multiple lateral transfer events of dissimilatory sulfite reductase genes between major lineages of Bacteria
28. Combination of fluorescent in situ hybridization and microautoradiography - A new tool for structure-function analyses in microbial ecology
29. The filamentous bacterial morphotype 'Nostocoida limicola' I contains at least two previously described genera in the low G + C gram positive bacteria
30. Phylogeny of the filamentous bacterium 'Nostocoida limicola' III from activated sludge
31. Isolation of a bacterium that reductively dechlorinates tetrachloroethene to ethene
32. Monitoring a widespread bacterial group: In situ detection of planctomycetes with 16S rRNA-targeted probes
33. Diversity and distribution in hypersaline microbial mats of bacteria related to Chloroflexus spp
34. The genus Herpetosiphon
35. In situ detection, isolation, and physiological properties of a thin filamentous microorganism abundant in methanogenic granular sludges: A novel isolate affiliated with a clone cluster, the green non-sulfur bacteria, subdivision 1
36. Characterization of a new gramnegative filamentous bacterium isolated from bulking sludge
37. Phylogenetic analysis and in situ identification of bacteria in activated sludge
38. Development and application of nucleic acid probes
39. Characterization of Herpetosiphon spec. - A gliding filamentous bacterium from bulking sludge
40. Identification and in situ detection of Gram-negative filamentous bacteria in activated sludge
41. Bacterial evolution