메뉴 건너뛰기




Volumn 36, Issue 1, 1998, Pages 37-50

Phylogenetic diversity of archaea and bacteria in a deep subsurface paleosol

Author keywords

[No Author keywords available]

Indexed keywords

BACILLUS; BACTERIUM; BURKHOLDERIA; CLAVIBACTER; COMAMONAS; ERYTHROMICROBIUM; GENBANK; MICROCOCCUS; NOCARDIOIDES; PALEOSOL; POLYMERASE CHAIN REACTION; PSEUDOMONAS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; RIBOSOMAL RNA; UNITED STATES;

EID: 0031811165     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s002489900091     Document Type: Article
Times cited : (102)

References (72)
  • 1
    • 0028946084 scopus 로고
    • Phylogenetic identification and in situ detection of individual microbial cells without cultivation
    • Amann RI, Ludwig W, Schleifer K-H (1995) Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev 59:145-169
    • (1995) Microbiol Rev , vol.59 , pp. 145-169
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.-H.3
  • 2
    • 0026793824 scopus 로고
    • Comparison of identification systems for classification of bacteria isolated from water and endolithic habitats within the deep subsurface
    • Amy PS, Haldeman DL, Ringelberg D, Hall DH, Russell C (1992) Comparison of identification systems for classification of bacteria isolated from water and endolithic habitats within the deep subsurface. Appl Environ Microbiol 58:3367-3373
    • (1992) Appl Environ Microbiol , vol.58 , pp. 3367-3373
    • Amy, P.S.1    Haldeman, D.L.2    Ringelberg, D.3    Hall, D.H.4    Russell, C.5
  • 3
    • 0028343555 scopus 로고
    • Remarkable archaeal diversity detected in a Yellowstone National Park hot spring environment
    • Barns SM, Fundyga RE, Jeffries MW, Pace NR (1994) Remarkable archaeal diversity detected in a Yellowstone National Park hot spring environment. Proc Natl Acad Sci USA 91:1609-1613
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 1609-1613
    • Barns, S.M.1    Fundyga, R.E.2    Jeffries, M.W.3    Pace, N.R.4
  • 4
    • 0029832927 scopus 로고    scopus 로고
    • Perspectives on archaeal diversity, thermophily and monophyly from environmental rRNA sequences
    • Barns SM, Delwiche CF, Palmer JD, Pace NR (1996) Perspectives on archaeal diversity, thermophily and monophyly from environmental rRNA sequences. Proc Natl Acad Sci USA 93: 9188-9193
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 9188-9193
    • Barns, S.M.1    Delwiche, C.F.2    Palmer, J.D.3    Pace, N.R.4
  • 5
    • 0027939228 scopus 로고
    • Isolation and characterization of heterotrophic, aerobic bacteria from oil storage caverns in northern Germany
    • Bock M, Kämpfer P, Bosecker K, Dott W (1994) Isolation and characterization of heterotrophic, aerobic bacteria from oil storage caverns in northern Germany. Appl Microbiol Bio-technol 42:463-468
    • (1994) Appl Microbiol Bio-technol , vol.42 , pp. 463-468
    • Bock, M.1    Kämpfer, P.2    Bosecker, K.3    Dott, W.4
  • 6
    • 0029120869 scopus 로고
    • Comparison of phenotypical and molecular methods for the identification of bacterial strains isolated from a deep subsurface environment
    • Boivin-Jahns V, Bianchi A, Ruimy R, Garcin J, Daumas S, Christen R (1995) Comparison of phenotypical and molecular methods for the identification of bacterial strains isolated from a deep subsurface environment. Appl Environ Microbiol 61:3400-3406
    • (1995) Appl Environ Microbiol , vol.61 , pp. 3400-3406
    • Boivin-Jahns, V.1    Bianchi, A.2    Ruimy, R.3    Garcin, J.4    Daumas, S.5    Christen, R.6
  • 8
    • 0030778941 scopus 로고    scopus 로고
    • Subsurface microbiological heterogeneity: Current knowledge, descriptive approaches, and applications
    • Brockman FJ, Murray CJ (1997) Subsurface microbiological heterogeneity: current knowledge, descriptive approaches, and applications. FEMS Microbiol Rev 20:231-247
    • (1997) FEMS Microbiol Rev , vol.20 , pp. 231-247
    • Brockman, F.J.1    Murray, C.J.2
  • 11
    • 0030025916 scopus 로고    scopus 로고
    • A computer analysis of primer and probe hybridization potential with bacterial small-subunit rRNA sequences
    • Brunk CF, Avaniss-Aghajani E, Brunk CA (1996) A computer analysis of primer and probe hybridization potential with bacterial small-subunit rRNA sequences. Appl Environ Microbiol 62:872-879
    • (1996) Appl Environ Microbiol , vol.62 , pp. 872-879
    • Brunk, C.F.1    Avaniss-Aghajani, E.2    Brunk, C.A.3
  • 12
    • 0031149569 scopus 로고    scopus 로고
    • Effect of PCR template concentration on the composition and distribution of total community 16S rDNA clone libraries
    • Chandler DP, Brockman FJ, Fredrickson JK (1997) Effect of PCR template concentration on the composition and distribution of total community 16S rDNA clone libraries. Mol Ecol 6:475-482
    • (1997) Mol Ecol , vol.6 , pp. 475-482
    • Chandler, D.P.1    Brockman, F.J.2    Fredrickson, J.K.3
  • 13
    • 0030802010 scopus 로고    scopus 로고
    • Use of 16S rDNA clone libraries to study changes in a microbial community resulting from ex situ perturbation of a subsurface sediment
    • Chandler DP, Brockman FJ, Fredrickson JK (1997) Use of 16S rDNA clone libraries to study changes in a microbial community resulting from ex situ perturbation of a subsurface sediment. FEMS Microbiol Rev 20:217-230
    • (1997) FEMS Microbiol Rev , vol.20 , pp. 217-230
    • Chandler, D.P.1    Brockman, F.J.2    Fredrickson, J.K.3
  • 14
    • 0026755238 scopus 로고
    • Archaea in coastal marine environments
    • DeLong EF (1992) Archaea in coastal marine environments. Proc Natl Acad Sci USA 89:5685-5689
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 5685-5689
    • DeLong, E.F.1
  • 15
    • 0028594902 scopus 로고
    • High abundance of Archaea in Antarctic marine picoplankton
    • DeLong EF, Wu KY, Prézolin BB, Jovine RVM (1994) High abundance of Archaea in Antarctic marine picoplankton. Nature 371:695-697
    • (1994) Nature , vol.371 , pp. 695-697
    • DeLong, E.F.1    Wu, K.Y.2    Prézolin, B.B.3    Jovine, R.V.M.4
  • 17
    • 0028037684 scopus 로고
    • Characterization of attached bacterial populations in deep granitic groundwater from the Stripa research mine by 16S rRNA gene sequencing and scanning electron microscopy
    • Ekendahl S, Arlinger J, Ståhl F, Pedersen K (1994) Characterization of attached bacterial populations in deep granitic groundwater from the Stripa research mine by 16S rRNA gene sequencing and scanning electron microscopy. Microbiology 140:1575-1583
    • (1994) Microbiology , vol.140 , pp. 1575-1583
    • Ekendahl, S.1    Arlinger, J.2    Ståhl, F.3    Pedersen, K.4
  • 18
    • 0029151363 scopus 로고
    • In situ analysis of the bacterial community in the gut of the earthworm Lumbricus terrestris L by whole-cell hybridization
    • Fischer K, Hahn D, Amann RI, Daniel O, Zeyer J (1995) In situ analysis of the bacterial community in the gut of the earthworm Lumbricus terrestris L by whole-cell hybridization. Can J Microbiol 41:666-673
    • (1995) Can J Microbiol , vol.41 , pp. 666-673
    • Fischer, K.1    Hahn, D.2    Amann, R.I.3    Daniel, O.4    Zeyer, J.5
  • 19
    • 0025919183 scopus 로고
    • Physiological diversity and distributions of heterotrophic bacteria in deep cretaceous sediments of the Atlantic coastal plain
    • Fredrickson JK, Balkwill DL, Zachara JM, Li SW, Brockman FJ, Simmons MA (1991) Physiological diversity and distributions of heterotrophic bacteria in deep cretaceous sediments of the Atlantic coastal plain. Appl Environ Microbiol 57:402-411
    • (1991) Appl Environ Microbiol , vol.57 , pp. 402-411
    • Fredrickson, J.K.1    Balkwill, D.L.2    Zachara, J.M.3    Li, S.W.4    Brockman, F.J.5    Simmons, M.A.6
  • 21
    • 0028956922 scopus 로고
    • Time-dependent changes in viable numbers and activities of aerobic heterotrophic bacteria in subsurface samples
    • Fredrickson JK, Li SW, Brockman FJ, Haldeman DL, Amy PS, Balkwill DL (1995) Time-dependent changes in viable numbers and activities of aerobic heterotrophic bacteria in subsurface samples. J Microbiol Meth 21:253-265
    • (1995) J Microbiol Meth , vol.21 , pp. 253-265
    • Fredrickson, J.K.1    Li, S.W.2    Brockman, F.J.3    Haldeman, D.L.4    Amy, P.S.5    Balkwill, D.L.6
  • 23
    • 0030613343 scopus 로고    scopus 로고
    • Population structure of microbial communities associated with two deep, anaerobic, alkaline aquifers
    • Fry NK, Fredrickson JK, Fishbain S, Wagner M, Stahl DA (1997) Population structure of microbial communities associated with two deep, anaerobic, alkaline aquifers. Appl Envtron Microbiol 63:1498-1504
    • (1997) Appl Envtron Microbiol , vol.63 , pp. 1498-1504
    • Fry, N.K.1    Fredrickson, J.K.2    Fishbain, S.3    Wagner, M.4    Stahl, D.A.5
  • 24
    • 0026525546 scopus 로고
    • Novel major; archaebacterial group from marine plankton
    • Fuhrman JA, McCallum K, Davis AA (1992) Novel major; archaebacterial group from marine plankton. Nature 356:148-149
    • (1992) Nature , vol.356 , pp. 148-149
    • Fuhrman, J.A.1    McCallum, K.2    Davis, A.A.3
  • 25
    • 0029798513 scopus 로고    scopus 로고
    • 16S rRNA genes reveal stratified open ocean bacterioplankton populations related to the Green Non-Sulfur bacteria
    • Giovannoni SJ, Rappé MS, Vergin KL, Adair NL (1996) 16S rRNA genes reveal stratified open ocean bacterioplankton populations related to the Green Non-Sulfur bacteria. Proc Natl Acad Sci USA 93:7979-7984
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 7979-7984
    • Giovannoni, S.J.1    Rappé, M.S.2    Vergin, K.L.3    Adair, N.L.4
  • 26
    • 0026581202 scopus 로고
    • Detection of micro-organisms in soil after in situ hybridization with rRNA-targeted, fluorescently labeled oligonucleotides
    • Hahn D, Amann RI, Ludwig W, Akkermans ADL, Schleifer C-H (1992) Detection of micro-organisms in soil after in situ hybridization with rRNA-targeted, fluorescently labeled oligonucleotides. J Gen Micro 138:879-887
    • (1992) J Gen Micro , vol.138 , pp. 879-887
    • Hahn, D.1    Amann, R.I.2    Ludwig, W.3    Akkermans, A.D.L.4    Schleifer, C.-H.5
  • 27
    • 34250080401 scopus 로고
    • Bacterial heterogeneity in deep subsurface tunnels at Rainier Mesa, Nevada test site
    • Haldeman DL, Amy PS (1993) Bacterial heterogeneity in deep subsurface tunnels at Rainier Mesa, Nevada test site. Microb Ecol 25:183-194
    • (1993) Microb Ecol , vol.25 , pp. 183-194
    • Haldeman, D.L.1    Amy, P.S.2
  • 29
    • 0027963464 scopus 로고
    • Changes in bacteria recoverable from subsurface volcanic rock samples during storage at 4°C
    • Haldeman DL, Amy PS, White DC, Ringelberg DB (1994) Changes in bacteria recoverable from subsurface volcanic rock samples during storage at 4°C. Appl Environ Microbiol 60: 2697-2703
    • (1994) Appl Environ Microbiol , vol.60 , pp. 2697-2703
    • Haldeman, D.L.1    Amy, P.S.2    White, D.C.3    Ringelberg, D.B.4
  • 30
    • 0027954194 scopus 로고
    • Comparison of the microbiota recovered from surface and deep subsurface rock, water, and soil along an elevational gradient
    • Haldeman DL, Pitonzo BJ, Story SP, Amy PS (1994) Comparison of the microbiota recovered from surface and deep subsurface rock, water, and soil along an elevational gradient. Geomicrobiol J 12:99-111
    • (1994) Geomicrobiol J , vol.12 , pp. 99-111
    • Haldeman, D.L.1    Pitonzo, B.J.2    Story, S.P.3    Amy, P.S.4
  • 33
    • 0024797458 scopus 로고
    • Aerobic metabolic potential of microbial populations indigenous to deep subsurface environments
    • Hicks RJ, Fredrickson JK (1989) Aerobic metabolic potential of microbial populations indigenous to deep subsurface environments. Geomicrobiol J 7:67-78
    • (1989) Geomicrobiol J , vol.7 , pp. 67-78
    • Hicks, R.J.1    Fredrickson, J.K.2
  • 35
    • 0000689680 scopus 로고
    • Anaerobic metabolic processes in the deep terrestrial subsurface
    • Jones RE, Beeman RE, Suflita JM (1989) Anaerobic metabolic processes in the deep terrestrial subsurface. Geomicrobiol J 7:117-130
    • (1989) Geomicrobiol J , vol.7 , pp. 117-130
    • Jones, R.E.1    Beeman, R.E.2    Suflita, J.M.3
  • 36
    • 0026691615 scopus 로고
    • Rapid in situ hybridization technique using 16S rRNA segments for detecting and differentiating the closely related gram-positive organisms Bacillus polymyxa and Bacillus macerans
    • Jurtshuk RJ, Blick M, Bresser J, Fox GE, Jurtshuk PJ (1992) Rapid in situ hybridization technique using 16S rRNA segments for detecting and differentiating the closely related gram-positive organisms Bacillus polymyxa and Bacillus macerans. Appl Environ Microbiol 58:2571-2578
    • (1992) Appl Environ Microbiol , vol.58 , pp. 2571-2578
    • Jurtshuk, R.J.1    Blick, M.2    Bresser, J.3    Fox, G.E.4    Jurtshuk, P.J.5
  • 37
    • 0542365428 scopus 로고
    • Archeae (Archaebacteria)
    • Springer Verlag, Berlin
    • Kandler O (1993) Archeae (Archaebacteria). Progress in Botany. Vol. 54. Springer Verlag, Berlin, pp 1-24
    • (1993) Progress in Botany , vol.54 , pp. 1-24
    • Kandler, O.1
  • 38
    • 0027460327 scopus 로고
    • Monitoring the enrichment and isolation of sulfate-reducing bacteria by using oligonucleotide hybridization probes designed from environmentally derived 16S rRNA sequences
    • Kane MD, Poulsen LK, Stahl LD (1992) Monitoring the enrichment and isolation of sulfate-reducing bacteria by using oligonucleotide hybridization probes designed from environmentally derived 16S rRNA sequences. Appl Environ Microbiol 59:682-686
    • (1992) Appl Environ Microbiol , vol.59 , pp. 682-686
    • Kane, M.D.1    Poulsen, L.K.2    Stahl, L.D.3
  • 39
    • 0027795867 scopus 로고
    • Microbial abundance and activities in relation to water potential in the vadose zones of arid and semiarid sites
    • Kieft TL, Amy PS, Brockman FJ, Fredrickson JK, Bjornstad BN, Rosacker LL (1993) Microbial abundance and activities in relation to water potential in the vadose zones of arid and semiarid sites. Microb Ecol 26:59-78
    • (1993) Microb Ecol , vol.26 , pp. 59-78
    • Kieft, T.L.1    Amy, P.S.2    Brockman, F.J.3    Fredrickson, J.K.4    Bjornstad, B.N.5    Rosacker, L.L.6
  • 41
    • 0028082207 scopus 로고
    • Recognition of chimeric small subunit ribosomal DNAs composed of genes from uncultivated microorganisms
    • Kapczynski ED, Bateson MM, Ward DM (1994) Recognition of chimeric small subunit ribosomal DNAs composed of genes from uncultivated microorganisms. Appl Environ Microbiol 60:746-748
    • (1994) Appl Environ Microbiol , vol.60 , pp. 746-748
    • Kapczynski, E.D.1    Bateson, M.M.2    Ward, D.M.3
  • 42
    • 0001857117 scopus 로고
    • 16S/23S rRNA Sequencing
    • Stackebrandt E, Goodfellow M (eds) John Wiley & Sons Ltd., New York
    • Lane DJ (1991) 16S/23S rRNA Sequencing. In: Stackebrandt E, Goodfellow M (eds) Nucleic Acid Techniques in Bacterial Systematics. John Wiley & Sons Ltd., New York, pp 115-147
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-147
    • Lane, D.J.1
  • 43
    • 0030438385 scopus 로고    scopus 로고
    • Estimation of numbers of an uncultured soil bacterial strain by a competitive quantitative PCR method
    • Lee SY, Bollinger J, Bezdicek D, Ogram A (1996) Estimation of numbers of an uncultured soil bacterial strain by a competitive quantitative PCR method. Appl Environ Microbiol 62: 3787-3793
    • (1996) Appl Environ Microbiol , vol.62 , pp. 3787-3793
    • Lee, S.Y.1    Bollinger, J.2    Bezdicek, D.3    Ogram, A.4
  • 46
    • 0028184602 scopus 로고
    • Estimation of diversity and community structure through restriction fragment length polymorphism distribution analysis of bacterial 16S rRNA genes from a microbial mat at an active, hydrothermal vent system, Loihi Seamount, Hawaii
    • Moyer CL, Dobbs FC, Karl DM (1994) Estimation of diversity and community structure through restriction fragment length polymorphism distribution analysis of bacterial 16S rRNA genes from a microbial mat at an active, hydrothermal vent system, Loihi Seamount, Hawaii. Appl Environ Microbiol 60: 871-879
    • (1994) Appl Environ Microbiol , vol.60 , pp. 871-879
    • Moyer, C.L.1    Dobbs, F.C.2    Karl, D.M.3
  • 47
    • 0029902203 scopus 로고    scopus 로고
    • A computer-simulated restriction fragment length polymorphism analysis of bacterial small-subunit rRNA genes: Efficacy of selected tetrameric restriction enzymes for studies of microbial diversity in nature
    • Moyer CL, Tiedje JM, Dobbs FC, Karl DM (1996) A computer-simulated restriction fragment length polymorphism analysis of bacterial small-subunit rRNA genes: efficacy of selected tetrameric restriction enzymes for studies of microbial diversity in nature. Appl Environ Microbiol 62:2501-2507
    • (1996) Appl Environ Microbiol , vol.62 , pp. 2501-2507
    • Moyer, C.L.1    Tiedje, J.M.2    Dobbs, F.C.3    Karl, D.M.4
  • 48
    • 0026569655 scopus 로고
    • Characterization of natural populations of Nitrobacter spp. using PCR/RFLP analysis of the ribosomal intergenic spacer
    • Navarro E, Simonet P, Normand P, Bardin R (1992) Characterization of natural populations of Nitrobacter spp. using PCR/RFLP analysis of the ribosomal intergenic spacer. Archives of Microbiol 157:107-115
    • (1992) Archives of Microbiol , vol.157 , pp. 107-115
    • Navarro, E.1    Simonet, P.2    Normand, P.3    Bardin, R.4
  • 49
    • 0028116029 scopus 로고
    • merA gene expression in aquatic environments measured by mRNA production and Hg(II) volatilization
    • Nazaret S, Jeffrey WH, Saouter E, Vonhaven R, Barkay T (1994) merA gene expression in aquatic environments measured by mRNA production and Hg(II) volatilization. Appl Environ Microbiol 60:4059-4065
    • (1994) Appl Environ Microbiol , vol.60 , pp. 4059-4065
    • Nazaret, S.1    Jeffrey, W.H.2    Saouter, E.3    Vonhaven, R.4    Barkay, T.5
  • 50
    • 0023748555 scopus 로고
    • The use of gene probes in the rapid analysis of natural microbial communities
    • Ogram AV, Sayler GS (1988) The use of gene probes in the rapid analysis of natural microbial communities. J Indust Microbiol 3:281-292
    • (1988) J Indust Microbiol , vol.3 , pp. 281-292
    • Ogram, A.V.1    Sayler, G.S.2
  • 51
    • 0028851170 scopus 로고
    • Isolation and characterization of RNA from low-biomass deep-subsurface sediments
    • Ogram S, Sun W, Brockman FJ, Fredrickson JK (1995) Isolation and characterization of RNA from low-biomass deep-subsurface sediments. Appl Environ Microbiol 61:763-768
    • (1995) Appl Environ Microbiol , vol.61 , pp. 763-768
    • Ogram, S.1    Sun, W.2    Brockman, F.J.3    Fredrickson, J.K.4
  • 53
    • 0002842298 scopus 로고
    • THe analysis of natural microbial populations by ribosomal RNA sequences
    • Pace NR, Stahl DA, Lane DJ, Olsen GJ (1986) THe analysis of natural microbial populations by ribosomal RNA sequences. Adv Microb Ecol 9:1-55
    • (1986) Adv Microb Ecol , vol.9 , pp. 1-55
    • Pace, N.R.1    Stahl, D.A.2    Lane, D.J.3    Olsen, G.J.4
  • 54
    • 0029973821 scopus 로고    scopus 로고
    • 16S rRNA gene diversity of attached and unattached bacteria in boreholes along the access tunnel to the Äspö hard rock laboratory, Sweden
    • Pedersen K, Arlinger J, Ekendahl S, Hallbeck L (1996) 16S rRNA gene diversity of attached and unattached bacteria in boreholes along the access tunnel to the Äspö hard rock laboratory, Sweden. FEMS Microb Ecol 19:249-262
    • (1996) FEMS Microb Ecol , vol.19 , pp. 249-262
    • Pedersen, K.1    Arlinger, J.2    Ekendahl, S.3    Hallbeck, L.4
  • 55
    • 0030164089 scopus 로고    scopus 로고
    • Diversity and distribution of subterranean bacteria in groundwater at Oklo in Gabon, Africa, as determined by 16S rRNA gene sequencing
    • Pedersen K, Arlinger J, Hallbeck L, Pettersson C (1996) Diversity and distribution of subterranean bacteria in groundwater at Oklo in Gabon, Africa, as determined by 16S rRNA gene sequencing. Mol Ecol 5:427-436
    • (1996) Mol Ecol , vol.5 , pp. 427-436
    • Pedersen, K.1    Arlinger, J.2    Hallbeck, L.3    Pettersson, C.4
  • 56
    • 0029667159 scopus 로고    scopus 로고
    • Distribution of bacterial populations in a stratified fjord (Mariager Fjord, Denmark) quantified by in situ hybridization and related to chemical gradients in the water column
    • Ramsing NB, Fossing H, Gerdelman TG, Andersen F, Thamdrup B (1996) Distribution of bacterial populations in a stratified fjord (Mariager Fjord, Denmark) quantified by in situ hybridization and related to chemical gradients in the water column. Appl Environ Microbiol 62:1391-1404
    • (1996) Appl Environ Microbiol , vol.62 , pp. 1391-1404
    • Ramsing, N.B.1    Fossing, H.2    Gerdelman, T.G.3    Andersen, F.4    Thamdrup, B.5
  • 57
    • 0028165833 scopus 로고
    • Quantification of methanogenic groups in anaerobic biological reactors by oligonucleotide probe hybridization
    • Raskin L, Poulsen LK, Noguera DR, Rittmann BE, Stahl DA (1994) Quantification of methanogenic groups in anaerobic biological reactors by oligonucleotide probe hybridization. Appl Environ Microbiol 60:1241-1248
    • (1994) Appl Environ Microbiol , vol.60 , pp. 1241-1248
    • Raskin, L.1    Poulsen, L.K.2    Noguera, D.R.3    Rittmann, B.E.4    Stahl, D.A.5
  • 58
    • 0028915470 scopus 로고
    • Evaluation of nearest-neighbor methods for detection of chimeric small-subunit rRNA sequences
    • Robinson-Cox JF, Bateson MM, Ward DM (1995) Evaluation of nearest-neighbor methods for detection of chimeric small-subunit rRNA sequences. Appl Environ Microbiol 61:1240-1245
    • (1995) Appl Environ Microbiol , vol.61 , pp. 1240-1245
    • Robinson-Cox, J.F.1    Bateson, M.M.2    Ward, D.M.3
  • 59
    • 0030043863 scopus 로고    scopus 로고
    • Genetic diversity among Frankia strains nodulating members of the family cusuarinaceae in Australia revealed by PCR and restriction fragment length polymorphism analysis with crushed root nodules
    • Rouvier C, Prin Y, Reddell P, Normand P, Simonet P (1996) Genetic diversity among Frankia strains nodulating members of the family cusuarinaceae in Australia revealed by PCR and restriction fragment length polymorphism analysis with crushed root nodules. Appl Environ Microbiol 62:979-985
    • (1996) Appl Environ Microbiol , vol.62 , pp. 979-985
    • Rouvier, C.1    Prin, Y.2    Reddell, P.3    Normand, P.4    Simonet, P.5
  • 60
    • 0025092974 scopus 로고
    • Environmental application of nucleic acid hybridization
    • Sayler GS, Layton AC (1990) Environmental application of nucleic acid hybridization. Annu Rev Microbiol 44:625-48
    • (1990) Annu Rev Microbiol , vol.44 , pp. 625-648
    • Sayler, G.S.1    Layton, A.C.2
  • 61
    • 0031033384 scopus 로고    scopus 로고
    • Recovery of Crenarchaeotal ribosomal DNA sequences from freshwater-lake sediments
    • Schleper C, Holben W, Klenk H-P (1997) Recovery of Crenarchaeotal ribosomal DNA sequences from freshwater-lake sediments. Appl Environ Microbiol 63:321-323
    • (1997) Appl Environ Microbiol , vol.63 , pp. 321-323
    • Schleper, C.1    Holben, W.2    Klenk, H.-P.3
  • 62
    • 0025814594 scopus 로고
    • Detection of DNA contamination in Taq polymerase
    • Schmidt TM, Pace B, Pace NR (1992) Detection of DNA contamination in Taq polymerase. BioTechniques 11:176-177
    • (1992) BioTechniques , vol.11 , pp. 176-177
    • Schmidt, T.M.1    Pace, B.2    Pace, N.R.3
  • 63
    • 0002324728 scopus 로고
    • Unifying phytogeny and phenotypic diversity
    • Holt JG (ed) Williams & Wilkins, Baltimore
    • Stackebrandt E (1984) Unifying phytogeny and phenotypic diversity. In: Holt JG (ed) Bergey's Manual of Systematic Bacteriology, Vol. 1. Williams & Wilkins, Baltimore, pp 19-47
    • (1984) Bergey's Manual of Systematic Bacteriology , vol.1 , pp. 19-47
    • Stackebrandt, E.1
  • 64
    • 0026770108 scopus 로고
    • Ribosomal RNA and rDNA sequence analyses
    • Stackebrandt E, Liesack W, Witt D (1992) Ribosomal RNA and rDNA sequence analyses. Gene 115:255-260
    • (1992) Gene , vol.115 , pp. 255-260
    • Stackebrandt, E.1    Liesack, W.2    Witt, D.3
  • 65
    • 0001945992 scopus 로고
    • Bacteria associated with deep, alkaline, anaerobic groundwaters in southeast Washington
    • Stevens TO, McKinley JP, Fredrickson JK (1993) Bacteria associated with deep, alkaline, anaerobic groundwaters in southeast Washington. Microb Ecol 25:35-50
    • (1993) Microb Ecol , vol.25 , pp. 35-50
    • Stevens, T.O.1    McKinley, J.P.2    Fredrickson, J.K.3
  • 66
    • 0001336205 scopus 로고    scopus 로고
    • Phylogenetic inference
    • Hillis DM, Moritz C, Mable BK (eds) Sinauer Associates, Inc., Sunderland, MA
    • Swofford DL, Olsen GJ, Waddell PJ, Hillis DM (1996) Phylogenetic inference. In: Hillis DM, Moritz C, Mable BK (eds) Molecular Systematics. Sinauer Associates, Inc., Sunderland, MA, pp 407-514
    • (1996) Molecular Systematics , pp. 407-514
    • Swofford, D.L.1    Olsen, G.J.2    Waddell, P.J.3    Hillis, D.M.4
  • 67
    • 0027202733 scopus 로고
    • Interference of humic acids and DNA extracted directly from soil in detection and transformation of recombinant DNA from bacteria and yeast
    • Tebbe CC, Vahjen W (1993) Interference of humic acids and DNA extracted directly from soil in detection and transformation of recombinant DNA from bacteria and yeast. Appl Environ Microbiol 59:2657-2665
    • (1993) Appl Environ Microbiol , vol.59 , pp. 2657-2665
    • Tebbe, C.C.1    Vahjen, W.2
  • 68
    • 0025366456 scopus 로고
    • 16S rRNA sequences reveal numerous uncultured microorganisms in a natural community
    • Ward DM, Weller RW, Bateson MM (1990) 16S rRNA sequences reveal numerous uncultured microorganisms in a natural community. Nature 345:63-65
    • (1990) Nature , vol.345 , pp. 63-65
    • Ward, D.M.1    Weller, R.W.2    Bateson, M.M.3
  • 69
    • 0002516928 scopus 로고
    • Identifying and culturing the 'unculturables': A challenge for microbiologists
    • Allsopp D, Colwell RR, Hawksworth DL (eds) CAB International
    • Ward N, Rainey FA, Goebel B, Stackbrandt E (1995) Identifying and culturing the 'unculturables': a challenge for microbiologists. In: Allsopp D, Colwell RR, Hawksworth DL (eds) Microbial Diversity and Ecosystem Function. CAB International, pp 89-110
    • (1995) Microbial Diversity and Ecosystem Function , pp. 89-110
    • Ward, N.1    Rainey, F.A.2    Goebel, B.3    Stackbrandt, E.4
  • 70
    • 0029668450 scopus 로고    scopus 로고
    • Diversity of uncultured microorganisms associated with the Seagrass Halophila stipulacea estimated by restriction fragment length polymorphism analysis of PCR-amplified 16S rRNA genes
    • Weidner S, Arnold W, Pühler A (1996) Diversity of uncultured microorganisms associated with the Seagrass Halophila stipulacea estimated by restriction fragment length polymorphism analysis of PCR-amplified 16S rRNA genes. Appl Environ Microbiol 62:766-771
    • (1996) Appl Environ Microbiol , vol.62 , pp. 766-771
    • Weidner, S.1    Arnold, W.2    Pühler, A.3
  • 71
    • 0026050670 scopus 로고
    • A definition of the domains Archaea, Bacteria and Eucarya in terms of small subunit ribosomal RNA characteristics
    • Winker S, Woese CR (1991) A definition of the domains Archaea, Bacteria and Eucarya in terms of small subunit ribosomal RNA characteristics. System Appl Microbiol 14:305-310
    • (1991) System Appl Microbiol , vol.14 , pp. 305-310
    • Winker, S.1    Woese, C.R.2
  • 72
    • 77956856574 scopus 로고
    • The archaea: Their history and significance
    • Kates M, Kushner DJ, Matheson AT (eds) Elsevier Science Publishers B.V., Amsterdam
    • Woese CR (1993) The archaea: their history and significance. In: Kates M, Kushner DJ, Matheson AT (eds) The Biochemistry of Archaea (Archaebacteria), Vol. 26. Elsevier Science Publishers B.V., Amsterdam, pp vii-xxix
    • (1993) The Biochemistry of Archaea (Archaebacteria) , vol.26
    • Woese, C.R.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.