Molecular characterization of novel red green nonsulfur bacteria from five distinct hot spring communities in Yellowstone National Park

Applied and Environmental Microbiology

Volumn 68, Issue 1, 2002, Pages 346-355

  Boomer, S M ^a   Lodge, D P ^a   Dutton, B E ^a   Pierson, B ^a  

^a WESTERN OREGON UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ABSORPTION; BIODIVERSITY; CLONING; RNA; SULFUR;

RED GREEN NONSULFUR BACTERIA;

BACTERIA;

BACTERIOCHLOROPHYLL; PRIMER RNA; RNA 16S;

BACTERIUM; MOLECULAR ANALYSIS; SPRING WATER;

ABSORPTION SPECTROPHOTOMETRY; ARTICLE; BACTERIAL GROWTH; BACTERIUM; BACTERIUM DETECTION; BACTERIUM ISOLATE; CONTROLLED STUDY; GEOGRAPHIC DISTRIBUTION; GREEN NONSULFUR BACTERIUM; JAPAN; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PH; PHYLOGENY; ROSEIFLEXUS CASTENHOLZII; SEQUENCE HOMOLOGY; TEMPERATURE DEPENDENCE; THERMAL SPRING; UNITED STATES;

BACTERIOCHLOROPHYLL A; BASE SEQUENCE; CHLOROBI; DNA, RIBOSOMAL; ECOSYSTEM; FRESH WATER; MOLECULAR SEQUENCE DATA; PHYLOGENY; PIGMENTS, BIOLOGICAL; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; TEMPERATURE;

UNITED STATES;

BACTERIA (MICROORGANISMS); CHLOROFLEXI; ROSEIFLEXUS; ROSEIFLEXUS CASTENHOLZII;

EID: 0036135810     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.68.1.346-355.2002     Document Type: Article

References (27)

1. Basic local alignment search tool
2. Characterization of novel bacteriochlorophyll-a-containing red filaments from alkaline hot springs in Yellowstone National Park
3. Diversity and depth-specific distribution of SAR11 cluster rRNA genes from marine planktonic bacteria
4. The lightharvesting complexes of a thermophilic purple bacterium Chromatium tepidum
5. Selective enrichment and characterization of Roseospirillum parvum, gen. nov. and sp. nov., a new purple nonsulfur bacterium with unusual light absorption properties
6. Roseiflexus castenholzil gen. nov., sp. nov., a thermophilic, filamentous, photosynthetic bacterium which lacks chlorosomes
7. Isolation and purification of bacterial community DNA from environmental samples
8. Herpetosiphon aurantiacus gen. et sp. n., a new filamentous gliding organism
9. Impact of cultureindependent studies on the emerging phylogenetic view of bacterial diversity
10. Novel division level bacterial diversity in a Yellowstone hot spring
11. Investigation of candidate division TM7, a recently recognized major lineage of the domain bacteria with no known pure-culture representatives
12. The RDP-11 (Ribosomal Database Project)
13. Evolution of thermotolerance in hot spring cyanobacteria of the genus Synechococcus
14. The green non-sulfur bacteria: A deep branching in the eubacterial line of descent
15. The family Chloroflexacae
16. Physiological ecology of a gliding bacterium containing bacteriochlorophyll a
17. Heliothrix oregonensis, gen. nov., sp. nov., a phototrophic filamentous gliding bacterium containing bacteriochlorophyll a
18. Pigments, light penetration, and photosynthetic activity in the multi-layered microbial mats of Great Sippewissett Salt Marsh, Massachusetts
19. Spectral irradiance and distribution of pigments in a highly layered marine microbial mat
20. Chloroflexus-like organisms from marine and hypersaline environments: Distribution and diversity
21. Phylogenetic analysis of the hyperthermophilic pink filament community in Octopus Spring, Yellowstone National Park
22. Phylogenetic heterogeneity within the genus Herpetosiphon: Transfer of the marine species Herpetosiphon cohaerens, Herpetosiphon nigricans, and Herpetosiphon persicus to the genus Lewinella gen. nov. in the Flexibacter-Bacteroides-Cytophaga phylum
23. Uncultivated cyanobacteria Chloroflexus-like inhabitants, and spirochete-like inhabitants of a hot spring microbial mat
24. 16S rRNA sequences of uncultivated hot spring cyanobacterial mat inhabitants retrieved as randomly primed eDNA