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Volumn 219, Issue 3, 2002, Pages 325-342

The protein folds as platonic forms: New support for the pre-Darwinian conception of evolution by natural law

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN;

EID: 0036431539     PISSN: 00225193     EISSN: None     Source Type: Journal    
DOI: 10.1006/jtbi.2002.3128     Document Type: Article
Times cited : (46)

References (77)
  • 1
    • 0015859467 scopus 로고
    • Principles that govern the folding of protein chains
    • Anfinsen, C. B. (1973). Principles that govern the folding of protein chains. Science 181, 223-230.
    • (1973) Science , vol.181 , pp. 223-230
    • Anfinsen, C.B.1
  • 2
    • 0011438870 scopus 로고
    • London: Heinemann (A. L. Peck, English translation)
    • Aristotle (1937). Parts of Animals. London: Heinemann (A. L. Peck, English translation).
    • (1937) Parts of Animals
    • Aristotle1
  • 3
    • 0034682868 scopus 로고    scopus 로고
    • Extreme functional sensitivity to conservative amino acid changes on enzyme exteriors
    • Axe, D. (2000). Extreme functional sensitivity to conservative amino acid changes on enzyme exteriors. J. Mol. Biol. 301, 585-596.
    • (2000) J. Mol. Biol. , vol.301 , pp. 585-596
    • Axe, D.1
  • 5
  • 8
    • 0027122748 scopus 로고
    • One thousand families for the molecular biologist
    • Chothia, C. (1993). One thousand families for the molecular biologist. Nature 357, 543-544.
    • (1993) Nature , vol.357 , pp. 543-544
    • Chothia, C.1
  • 12
    • 0036500834 scopus 로고    scopus 로고
    • Reverse engineering of biological complexity
    • Csete, M. E. & Doyle, J. C. (2002). Reverse engineering of biological complexity. Science 295, 1164-1169.
    • (2002) Science , vol.295 , pp. 1164-1169
    • Csete, M.E.1    Doyle, J.C.2
  • 13
    • 0004017966 scopus 로고    scopus 로고
    • Middlesex, U.K.: Penguin Books
    • Davies, P. (2001). The Fifth Miracle. Middlesex, U.K.: Penguin Books.
    • (2001) The Fifth Miracle
    • Davies, P.1
  • 15
    • 0003547856 scopus 로고
    • London: Longman Scientific and Technical
    • Dawkins, R. (1986). The Blind Watchmaker. London: Longman Scientific and Technical.
    • (1986) The Blind Watchmaker
    • Dawkins, R.1
  • 16
    • 0004247828 scopus 로고
    • North Carolina: Neil Patterson Publishers
    • de Duve, C. (1991). Blueprint for a Cell. North Carolina: Neil Patterson Publishers.
    • (1991) Blueprint for a Cell
    • De Duve, C.1
  • 18
    • 0035932508 scopus 로고    scopus 로고
    • Laws of form revisited
    • Denton, M. J. & Marshall, C. J. (2001). Laws of form revisited. Nature 410, 417.
    • (2001) Nature , vol.410 , pp. 417
    • Denton, M.J.1    Marshall, C.J.2
  • 19
    • 0009586942 scopus 로고    scopus 로고
    • Understanding protein folding via free energy surfaces from theory and experiment
    • Dinner, A. R., Sali, A., Smith, L. J., Dobson, C. M. & Karplus, M. (2000). Understanding protein folding via free energy surfaces from theory and experiment. TIBS 25, 331-339.
    • (2000) TIBS , vol.25 , pp. 331-339
    • Dinner, A.R.1    Sali, A.2    Smith, L.J.3    Dobson, C.M.4    Karplus, M.5
  • 20
    • 0004222040 scopus 로고
    • London: Macmillan, Co. Ltd. (C. K. Ogden, English translation)
    • Driesc, H. H. (1914). The History and Theory of Vitalism. London: Macmillan, Co. Ltd. (C. K. Ogden, English translation).
    • (1914) The History and Theory of Vitalism
    • Driesc, H.H.1
  • 22
    • 0028319316 scopus 로고
    • Implications of the random characteristics of protein sequences for their three-dimensional structure
    • Finkelstein, A. V. (1994). Implications of the random characteristics of protein sequences for their three-dimensional structure. Curr. Opin. Struct. Biol. 4, 422-428.
    • (1994) Curr. Opin. Struct. Biol. , vol.4 , pp. 422-428
    • Finkelstein, A.V.1
  • 23
    • 0023479421 scopus 로고
    • Why do globular proteins fit the limited set of folding patterns?
    • Finkelstein, A. V. & Ptitsyn, O. B. (1987). Why do globular proteins fit the limited set of folding patterns? Prog. Biophys. Mol. Biol. 50, 171-190.
    • (1987) Prog. Biophys. Mol. Biol. , vol.50 , pp. 171-190
    • Finkelstein, A.V.1    Ptitsyn, O.B.2
  • 24
    • 0028801308 scopus 로고
    • Why do protein architectures have Boltzman-like staistics?
    • Finkelstein, A. V., Badretdinov, A. Y. & Gutin A. M. (1995). Why do protein architectures have Boltzman-like staistics? Proteins 23, 142-150.
    • (1995) Proteins , vol.23 , pp. 142-150
    • Finkelstein, A.V.1    Badretdinov, A.Y.2    Gutin, A.M.3
  • 25
    • 0002636541 scopus 로고
    • What are the developmental underpinnings of evolutionary changes in protozoan morphology?
    • Goodwin et al., eds. Cambridge: Cambridge University Press
    • Frankel, J. (1983). What are the developmental underpinnings of evolutionary changes in protozoan morphology? In: Development and Evolution (Goodwin et al., eds), pp. 279-314. Cambridge: Cambridge University Press.
    • (1983) Development and Evolution , pp. 279-314
    • Frankel, J.1
  • 26
    • 0034923923 scopus 로고    scopus 로고
    • Divergent evolution of enzymic function
    • Gerlt, J. A. & Babbit, P. C. (2001). Divergent evolution of enzymic function. Annu. Rev. Biochem. 70, 209-246.
    • (2001) Annu. Rev. Biochem. , vol.70 , pp. 209-246
    • Gerlt, J.A.1    Babbit, P.C.2
  • 29
    • 0018692402 scopus 로고
    • The spandrels of San Marco and the panglossian paradigm: A critique of the adaptational program
    • Gould, S. J. & Lewontin, R. C. (1979). The spandrels of San Marco and the panglossian paradigm: A critique of the adaptational program. Proc. R. Soc. London B 205, 581-598.
    • (1979) Proc. R. Soc. London B , vol.205 , pp. 581-598
    • Gould, S.J.1    Lewontin, R.C.2
  • 30
    • 0029785147 scopus 로고    scopus 로고
    • Mapping the protein universe
    • Holm, L. & Sander, C. (1996). Mapping the protein universe. Science 273, 595-602.
    • (1996) Science , vol.273 , pp. 595-602
    • Holm, L.1    Sander, C.2
  • 31
    • 0011436722 scopus 로고    scopus 로고
    • Touring protein fold space with Dali/FSSP
    • Holm, L. & Sander, C. (1999). Touring protein fold space with Dali/FSSP. Nucleic Acids Res. 27, 275-279.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 275-279
    • Holm, L.1    Sander, C.2
  • 32
    • 0032744232 scopus 로고    scopus 로고
    • Protein folding: From the Levinthal paradox to structure prediction
    • Honig, B. (1999). Protein folding: From the Levinthal paradox to structure prediction. J. Mol. Biol. 293, 283-293.
    • (1999) J. Mol. Biol. , vol.293 , pp. 283-293
    • Honig, B.1
  • 33
    • 0030059247 scopus 로고    scopus 로고
    • Morphogenetic properties of microtubules and mitotic spindle assembly
    • Hyman, A. A. & Karsenti, E. (1996). Morphogenetic properties of microtubules and mitotic spindle assembly. Cell 84, 401-410.
    • (1996) Cell , vol.84 , pp. 401-410
    • Hyman, A.A.1    Karsenti, E.2
  • 34
    • 0004118035 scopus 로고
    • Oxford: Oxford University Press (J. C. Meredith, English translation)
    • Kant, I. (1790). The Critique of Judgement. Oxford: Oxford University Press (J. C. Meredith, English translation).
    • (1790) The Critique of Judgement
    • Kant, I.1
  • 36
    • 0026722407 scopus 로고
    • Origin of genes: "Big bang" or continuous creation?
    • Keese, P. K. & Gibbs, A. (1992). Origin of genes: "Big bang" or continuous creation? Proc. Natl. Acad. Sci. U.S.A. 89, 9489-9493.
    • (1992) Proc. Natl. Acad. Sci. U.S.A. , vol.89 , pp. 9489-9493
    • Keese, P.K.1    Gibbs, A.2
  • 37
    • 0004120906 scopus 로고    scopus 로고
    • Cambridge, MA: Harvard University Press
    • Keller, E. F. (2000). The Century of the Gene. Cambridge, MA: Harvard University Press.
    • (2000) The Century of the Gene
    • Keller, E.F.1
  • 39
    • 0022919318 scopus 로고
    • Beyond self-assembly: From microtubules to morphogenesis
    • Kirschner, M. & Mitchison, T. (1986). Beyond self-assembly: From microtubules to morphogenesis. Cell 45, 329-342.
    • (1986) Cell , vol.45 , pp. 329-342
    • Kirschner, M.1    Mitchison, T.2
  • 41
    • 0036500993 scopus 로고    scopus 로고
    • Systems biology: A brief overview
    • Kitano, H. (2002). Systems biology: A brief overview. Science 295, 1662-1664.
    • (2002) Science , vol.295 , pp. 1662-1664
    • Kitano, H.1
  • 42
    • 0034284955 scopus 로고    scopus 로고
    • Structural evidence for evolution of the α/β barrel scaffold by gene duplication and fusion
    • Lang, D., Thomas, R., Henn-Saz, M., Sterner, R. & Wimmanns, M. (2000). Structural evidence for evolution of the α/β barrel scaffold by gene duplication and fusion. Science 289, 1546-1550.
    • (2000) Science , vol.289 , pp. 1546-1550
    • Lang, D.1    Thomas, R.2    Henn-Saz, M.3    Sterner, R.4    Wimmanns, M.5
  • 45
    • 0011438876 scopus 로고    scopus 로고
    • How many protein fold classes are to be found?
    • Bohr, H. & Brunak, S., eds. New York: CRC Press
    • Lindgard, P. & Bohr, H. (1996). How many protein fold classes are to be found? In: Protein Folds (Bohr, H. & Brunak, S., eds), pp. 98-102. New York: CRC Press.
    • (1996) Protein Folds , pp. 98-102
    • Lindgard, P.1    Bohr, H.2
  • 46
    • 0033401710 scopus 로고    scopus 로고
    • Understanding the transmission of the prion diseases
    • Manson, J. C. (1999). Understanding the transmission of the prion diseases. Trends Microbiol. 7, 465-467.
    • (1999) Trends Microbiol. , vol.7 , pp. 465-467
    • Manson, J.C.1
  • 51
    • 0024279564 scopus 로고
    • General architecture of the α helical globule
    • Murzin, A. G. & Finkelstein, A. V. (1988). General architecture of the α helical globule. J. Mol. Biol. 204, 749-769.
    • (1988) J. Mol. Biol. , vol.204 , pp. 749-769
    • Murzin, A.G.1    Finkelstein, A.V.2
  • 52
    • 0000886867 scopus 로고
    • Genes and phenes in tetrahymena: The epigenetic paradox in protozoa
    • Nanney, D. L. (1982). Genes and phenes in tetrahymena: The epigenetic paradox in protozoa. Bioscience 32, 783-788.
    • (1982) Bioscience , vol.32 , pp. 783-788
    • Nanney, D.L.1
  • 53
    • 0037813094 scopus 로고    scopus 로고
    • Self-organization of microtubules and motors
    • Nedelec, F. J., Surrey, T., Maggs, A.C. & Liebler, S. (1997). Self-organization of microtubules and motors. Nature 389, 305-308.
    • (1997) Nature , vol.389 , pp. 305-308
    • Nedelec, F.J.1    Surrey, T.2    Maggs, A.C.3    Liebler, S.4
  • 55
    • 0021323335 scopus 로고
    • Birth of a unique enzyme from an alternative reading frame of a preexisting internally repetitious coding sequence
    • Ohno, S. (1984). Birth of a unique enzyme from an alternative reading frame of a preexisting internally repetitious coding sequence. Proc. Natl. Acad. Sci. U.S.A. 81, 2421-2425.
    • (1984) Proc. Natl. Acad. Sci. U.S.A. , vol.81 , pp. 2421-2425
    • Ohno, S.1
  • 56
    • 0028593509 scopus 로고
    • Protein superfamilies and domain structures
    • Orengo, C. A., Jones, D. T. & Thornton, J. M. (1994). Protein superfamilies and domain structures. Nature 372, 631-634.
    • (1994) Nature , vol.372 , pp. 631-634
    • Orengo, C.A.1    Jones, D.T.2    Thornton, J.M.3
  • 60
  • 61
    • 0029110015 scopus 로고
    • The prion diseases
    • Prusiner, S. B. (1995). The prion diseases. Sci. Am. 272, 30-37.
    • (1995) Sci. Am. , vol.272 , pp. 30-37
    • Prusiner, S.B.1
  • 62
    • 0019053499 scopus 로고
    • Similarities of protein topologies: Evolutionary divergence, functional convergence or principles of folding
    • Ptitsyn, O. B. & Finkelstein, A. V. (1980). Similarities of protein topologies: Evolutionary divergence, functional convergence or principles of folding. Quart. Rev. Biophys. 13, 339-386.
    • (1980) Quart. Rev. Biophys. , vol.13 , pp. 339-386
    • Ptitsyn, O.B.1    Finkelstein, A.V.2
  • 64
    • 0019443447 scopus 로고
    • The anatomy and taxonomy of protein structure
    • Richardson, J. S. (1981). The anatomy and taxonomy of protein structure. Adv. Protein Chem. 34, 167-339.
    • (1981) Adv. Protein Chem. , vol.34 , pp. 167-339
    • Richardson, J.S.1
  • 65
    • 0011432932 scopus 로고
    • New Haven, CT: Yale University Press
    • Rupke, N. A. (1994). Richard Owen. New Haven, CT: Yale University Press.
    • (1994) Richard Owen
    • Rupke, N.A.1
  • 67
    • 0002983608 scopus 로고    scopus 로고
    • Protein folding from a combinatorial perspective
    • Sauer, R. T. (1996). Protein folding from a combinatorial perspective. Fold Des. 1, R27-R30.
    • (1996) Fold Des. , vol.1
    • Sauer, R.T.1
  • 68
    • 0011390253 scopus 로고
    • London: Sydenham Society. H. Smith, English translation; (Original published in German in 1839)
    • Schwann, T. (1847). Microscopical Researches. London: Sydenham Society. H. Smith, English translation; (Original published in German in 1839).
    • (1847) Microscopical Researches
    • Schwann, T.1
  • 69
    • 0034946416 scopus 로고    scopus 로고
    • Origins of life: A route to nanotechnology
    • Sowerby, S. J., Holm, N. G., & Petersen, G. B. (2001). Origins of life: A route to nanotechnology. Biosystems 61, 69-78.
    • (2001) Biosystems , vol.61 , pp. 69-78
    • Sowerby, S.J.1    Holm, N.G.2    Petersen, G.B.3
  • 71
    • 0033963523 scopus 로고    scopus 로고
    • Searching for the ideal forms of proteins
    • Taylor, W. R. (2000). Searching for the ideal forms of proteins. Biochem. Soc. Trans. 28, 264-269.
    • (2000) Biochem. Soc. Trans. , vol.28 , pp. 264-269
    • Taylor, W.R.1
  • 72
    • 0035029073 scopus 로고    scopus 로고
    • Protein structure: Geometry, toplogy and classification
    • Taylor, W. R., May, A. C. W., Brown, N. P. & Aszodi, A. (2001). Protein structure: Geometry, toplogy and classification. Rep. Prog. Phys. 64, 517-590.
    • (2001) Rep. Prog. Phys. , vol.64 , pp. 517-590
    • Taylor, W.R.1    May, A.C.W.2    Brown, N.P.3    Aszodi, A.4
  • 75
    • 33644478504 scopus 로고
    • The origin of species: A structuralist approach
    • Webster, G. & Goodwin, B. C. (1982). The origin of species: A structuralist approach. J. Soc. Struct. 5, 15-47.
    • (1982) J. Soc. Struct. , vol.5 , pp. 15-47
    • Webster, G.1    Goodwin, B.C.2
  • 77
    • 0032545151 scopus 로고    scopus 로고
    • Estimating the number of protein folds
    • Zhang, C. & Delisi, C. (1999). Estimating the number of protein folds. J. Mol. Biol. 284, 1301-1305.
    • (1999) J. Mol. Biol. , vol.284 , pp. 1301-1305
    • Zhang, C.1    Delisi, C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.