The use of DNA array technology in studies of ocular viral pathogenesis

DNA and Cell Biology

Volumn 21, Issue 5, 2002, Pages 483-490

  Natarajan, K ^a   Shepard, L A ^a   Chodosh, James ^a  

^a UNIVERSITY OF OKLAHOMA COLLEGE OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOVIRUS; APOPTOSIS; ARTICLE; CARCINOGENESIS; CELL CYCLE; CONTROLLED STUDY; CORNEA CELL; DNA MICROARRAY; GENE EXPRESSION; GENE EXPRESSION REGULATION; GENETIC TRANSCRIPTION; GENOTYPE; HOST CELL; HUMAN; HUMAN CELL; INFLAMMATION; KERATITIS; PRIORITY JOURNAL; VIRUS PATHOGENESIS;

ANIMALS; DNA, VIRAL; EYE INFECTIONS; HUMANS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS;

ADENOVIRIDAE;

EID: 0036374992     PISSN: 10445498     EISSN: None     Source Type: Journal    
DOI: 10.1089/10445490260099782     Document Type: Article

References (67)

1. Gene therapy for ocular disease
2. DNA microarray analysis of chimpanzee liver during acute resolving hepatitis C virus infection
3. Comparison of genetic divergence and fitness between two subclones of Helicobacter pylori
4. Cellular proteins that are targets for transformation by DNA tumour viruses
5. Discovering functional relationships between RNA expression and chemotherapeutic susceptibility using relevance networks
6. Detecting and genotyping Escherichia coli O157:H7 using multiplexed PCR and nucleic acid microarrays
7. The immune response to ocular herpes simplex virus type 1 infection
8. Population genetics - Making sense out of sequence
9. DNA microarrays of the complex human cytomegalovirus genome: Profiling kinetic class with drug sensitivity of viral gene expression
10. Characterization of transformation related genes in oral cancer cells
11. Microarray analysis identifies interferon-inducible genes and Stat-1 as major transcriptional targets of human papillomavirus type 31
12. Making and reading microarrays
13. Adenovirus keratitis: A role for interleukin-8
14. Adenovirus epithelial keratitis
15. Decreased neutrophil adhesion to human cytomegalovirus-infected retinal pigment epithelial cells is mediated by virus-induced up-regulation of Fas ligand independent of neutrophil apoptosis
16. Molecular therapy in ocular wound healing
17. Gene therapy in the treatment of ocular inflammation
18. Chips around the world: Proceedings from the Nature Genetics microarray meeting
19. Cluster analysis and display of genome-wide expression patterns
20. Light-directed, spatially addressable parallel chemical synthesis
21. Global impact of influenza virus on cellular pathways is mediated by both replication-dependent and -independent events
22. Large-scale monitoring of host cell gene expression during HIV-1 infection using cDNA microarrays
23. A comprehensive view of regulation of gene expression by double-stranded RNA-mediated cell signaling
24. The ups and downs of adenovirus vectors
25. The life and times of adenoviruses
26. Genotyping of 27 human papillomavirus types by using L1 consensus PCR products by a single-hybridization, reverse line blot detection method
27. Detection of heterozygous mutations in BRCA1 using high density oligonucleotide arrays and two-colour fluorescence analysis
28. Oligonucleotide microarray based detection of repetitive sequence changes
29. Selective transcriptional regulations in the human liver cell by hepatitis B viral X protein
30. Immunopathogenesis of viral ocular infections
31. Differential gene expression between chronic hepatitis B and C hepatic lesion
32. High-throughput genomic and proteomic analysis using microarray technology
33. A human hepatoma cell line expressing hepatitis c virus nonstructural proteins tightly regulated by tetracycline
34. Functional discovery via a compendium of expression profiles
35. Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF
36. Kaposi's sarcoma-associated herpesvirus latent and lytic gene expression as revealed by DNA arrays
37. Comparing genomes within the species Mycobacterium tuberculosis
38. Accumulation of specific RNAs encoding transcriptional factors and stress response proteins against a background of severe depletion of cellular RNAs in cells infected with herpes simplex virus 1
39. Typing and subtyping influenza virus using DNA microarrays and multiplex reverse transcriptase PCR
40. Varicella-zoster virus eye disease
41. Using oligonucleotide probe arrays to access genetic diversity
42. A strategy to identify positional candidate genes conferring Marek's disease resistance by integrating DNA microarrays and genetic mapping
43. Polypyrrole DNA chip on a silicon device: Example of hepatitis C virus genotyping
44. Drug target validation and identification of secondary drug target effects using DNA microarrays
45. Gene expression profile of herpesvirus-infected T cells obtained using immunomicroarrays: Induction of proinflammatory mechanisms
46. Herpes simplex virus triggers and then disarms a host antiviral response
47. Papillomavirus type 16 oncogenes downregulate expression of interferon-responsive genes and upregulate proliferation-associated and NF-kappaB-responsive genes in cervical keratinocytes
48. Role of alpha(v) integrins in adenovirus cell entry and gene delivery
49. Genome-wide expression changes induced by HTLV-1 Tax: Evidence for MLK- 3 mixed lineage kinase involvement in Tax-mediated NF-kappaB activation
50. The p107 tumor suppressor induces stable E2F DNA binding to repress target promoters
51. Transcription program of human herpesvirus 8 (Kaposi's sarcoma-associated herpesvirus)
52. Altered expression of Bag-1 in Coxsackievirus B3 infected mouse heart
53. Modulation of cellular and viral gene expression by the latency-associated nuclear antigen of Kaposi's sarcoma-associated herpesvirus
54. Induction of the cellular E2F-1 promoter by the adenovirus E4-6/7 protein
55. RNAs extracted from herpes simplex virus 1 virions: Apparent selectivity of viral but not cellular RNAs packaged in virions
56. Global analysis of herpes simplex virus type 1 transcription using an oligonucleotide-based DNA microarray
57. Anti-HIV agent MAP30 modulates the expression profile of viral and cellular genes for proliferation and apoptosis in AIDS-related lymphoma cells infected with Kaposi's sarcoma-associated virus
58. Interpreting patterns of gene expression with self-organizing maps: Methods and application to hematopoietic differentiation
59. Host gene regulation during coxsackievirus B3 infection in mice: Assessment by microarrays
60. Immunopathogenesis of herpetic ocular disease
61. Cellular changes induced by low-risk human papillomavirus type 11 in keratinocytes that stably maintain viral episomes
62. Induction of cellular genes is mediated by the Bel1 transactivator in foamy virus-infected human cells
63. Comparative evaluation of three human immunodeficiency virus genotyping systems: The HIV-GenotypR method, the HIV PRT GeneChip assay, and the HIV-1 RT line probe assay
64. Adenovirus genes that modulate the sensitivity of virus-infected cells to lysis by TNF
65. Distinctive gene expression profiles associated with Hepatitis B virus x protein
66. Insight into hepatocellular carcinogenesis at transcriptome level by comparing gene expression profiles of hepatocellular carcinoma with those of corresponding noncancerous liver
67. Cellular gene expression altered by human cytomegalovirus: Global monitoring with oligonucleotide arrays