SCOPUS 정보 검색 플랫폼

Volumn 29, Issue 17, 2001, Pages 3674-3684

Synthesis and monitored selection of nucleotide surrogates for binding T:A base pairs in homopurine-homopyrimidine DNA triple helices

(3) Mokhir, Andriy A a,b Connors, William H a,b Richert, Clemens a,b

a UNIVERSITY OF KONSTANZ (Germany)

b TUFTS UNIVERSITY (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENINE; ANTHRAQUINONE; CARBOXYLIC ACID; DNA; ETHYLENE GLYCOL DERIVATIVE; GLYCINE; NUCLEOTIDE; OLIGODEOXYRIBONUCLEOTIDE; PURINE; PYRIMIDINE; THYMIDINE;

ARTICLE; BASE PAIRING; CONTROLLED STUDY; DNA HELIX; MELTING POINT; PRIORITY JOURNAL; SYNTHESIS; TEMPERATURE; ULTRAVIOLET RADIATION;

BASE PAIRING; BINDING, COMPETITIVE; DEOXYRIBONUCLEASES; DNA; KINETICS; NUCLEIC ACID CONFORMATION; NUCLEIC ACID DENATURATION; OLIGONUCLEOTIDES; PURINES; PYRIMIDINES; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; TEMPERATURE;

EID: 0035446361 PISSN: 03051048 EISSN: None Source Type: Journal
DOI: None Document Type: Article

Times cited : (13)

References (37)

1
- 0003448576
- (eds) Oxford University Press, Oxford, UK
- (1996) Nucleic Acids in Chemistry and Biology
- Blackburn, G.M.¹ Gait, M.J.²

2
- 0003446592
- (eds) American Society for Microbiology, Washington, DC
- (1990) The Ribosome, Structure, Function and Evolution
- Hill, W.E.¹ Dahlberg, A.A.² Garrett, R.A.³ Moore, P.B.⁴ Schlessinger, D.⁵ Warner, J.R.⁶

3
- 0003588949
- (ed.) Oxford University Press, New York
- (1996) Bioorganic Chemistry-Nucleic Acids
- Hecht, S.M.¹

4
- 0032738421
- Double duplex invasion by peptide nucleic acid: A general principle for sequence-specific targeting of double-stranded DNA
- (1999) Proc. Natl Acad. Sci. USA , vol.96 , pp. 11804-11808
- Lohse, J.¹ Dahl, O.² Nielsen, P.E.³

5
- 0033577352
- Rules for strand invasion by chemically modified oligonucleotides
- (1999) J. Am. Chem. Soc. , vol.121 , pp. 2012-2020
- Ishihara, T.¹ Corey, D.R.²

6
- 0344641913
- Sequence-specific DNA recognition by polyamides
- (1999) Curr. Opin. Chem. Biol. , vol.3 , pp. 688-693
- Dervan, P.B.¹ Bürli, R.W.²

7
- 33748577758
- Sequence-specific recognition and modification of double-helical DNA by oligonucleotides
- (1993) Angew. Chem. Int. Ed. Engl. , vol.32 , pp. 666-692
- Thoung, N.T.¹ Hélène, C.²

8
- 0033118865
- Towards mixed sequence recognition by triple helix formation
- (1999) Nucleic Acids Res. , vol.27 , pp. 1569-1577
- Gowers, D.M.¹ Fox, K.R.²

9
- 0033674335
- Triplex technology takes off
- (2000) Nat. Biotechnol. , vol.18 , pp. 1245-1246
- Giovannangeli, C.¹ Hélène, C.²

10
- 0034724438
- Unambiguous demonstration of triple-helix-directed gene modification
- (2000) Proc. Natl Acad. Sci. USA , vol.97 , pp. 3084-3088
- Barre, F.X.¹ Ait-Si-Ali, S.² Giovannangeli, C.³ Luis, R.⁴ Robin, P.⁵ Pritchard, L.L.⁶ Hélène, C.⁷ Harel-Bellan, A.⁸

11
- 0030878687
- Sequence-specific targeting of duplex DNA using a camptothecin-triple helix forming oligonucleotide conjugate and topoisomerase I
- (1997) J. Am. Chem. Soc. , vol.119 , pp. 6939-6940
- Matteucci, M.¹ Lin, K.-Y.² Huang, T.³ Wagner, R.⁴ Sternbach, D.D.⁵ Mehrotra, M.⁶ Besterman, J.M.⁷

12
- 0033532893
- Selective recognition of a dC-dG base pair by oligonucleotide-directed triplex formation using a dC residue tethering an intercalator
- (1999) J. Am. Chem. Soc. , vol.121 , pp. 6334-6335
- Gianolio, D.A.¹ McLaughlin, L.W.²

13
- 0027407035
- Specific recognition of CG base pairs by 2-deoxynebularine within the purine purine pyrimidine triple-helix motif
- (1993) Biochemistry , vol.31 , pp. 2177-2185
- Stilz, H.U.¹ Dervan, P.B.²

14
- 0029901452
- Triplex formation by oligonucleotides containing novel deoxycytidine derivatives
- (1996) Nucleic Acids Res. , vol.24 , pp. 2606-2613
- Huang, C.-Y.¹ Bi, G.² Miller, P.S.³

15
- 0024473767
- Recognition of thymine adenine base pairs by guanine in a pyrimidine triple helix motif
- (1989) Science , vol.245 , pp. 967-971
- Griffin, L.C.¹ Dervan, P.B.²

16
- 0026603618
- Flanking sequence effects within the pyrimidine triple-helix motif characterized by affinity cleaving
- (1992) Biochemistry , vol.31 , pp. 2829-2834
- Kiessling, L.L.¹ Griffin, L.C.² Dervan, P.B.³

17
- 0028939788
- Azole substituted oligonucleotides promote antiparallel triplex formation at non-homopurine duplex targets
- (1995) Nucleic Acids Res. , vol.23 , pp. 647-653
- Durland, R.H.¹ Rao, T.S.² Bodepudi, V.³ Seth, D.M.⁴ Jayaraman, K.⁵ Revankar, G.R.⁶

18
- 0030664802
- A novel peptide nucleic acid monomer for recognition of thymine in triple-helix structures
- (1997) J. Am. Chem. Soc. , vol.119 , pp. 11116-11117
- Eldrup, A.B.¹ Dahl, O.² Nielsen, P.E.³

19
- 0032508016
- A convenient synthesis of 5′-amino-5′-deoxythymidine and preparation of peptide-DNA hybrids
- (1998) Tetrahedron Lett. , vol.39 , pp. 4215-4218
- Tetzlaff, C.N.¹ Schwope, I.² Bleczinski, C.F.³ Steinberg, J.A.⁴ Richert, C.⁵

20
- 33846811806
- Solid phase synthesis of oligodeoxynucleotides containing phosphoramidate internucleotide linkages and their specific chemical cleavage
- (1988) Helv. Chim. Acta , vol.71 , pp. 1517-1527
- Bannwarth, W.¹

21
- 0030814505
- Novel synthetic routes to PNA monomers and PNA-DNA linker molecules
- (1997) Tetrahedron , vol.53 , pp. 14671-14686
- Breipohl, G.¹ Will, D.W.² Peyman, A.³ Uhlmann, E.⁴

22
- 0033223759
- Selection of modified oligonucleotides with increased target affinity via MALDI-monitored nuclease survival assays
- (1999) J. Combin. Chem. , vol.1 , pp. 493-508
- Altman, R.K.¹ Schwope, I.² Sarracino, D.A.³ Tetzlaff, C.N.⁴ Bleczinski, C.F.⁵ Richert, C.⁶

23
- 0028247186
- Effect of abasic linker substitution on triplex formation, Sp1 binding, and specificity in an oligonucleotide targeted to the human Ha-ras promoter
- (1994) Nucleic Acids Res. , vol.22 , pp. 1909-1916
- Mayfield, C.¹ Miller, D.²

24
- 0029586169
- Design of a novel artificial nucleobase for the selective formation of a triple-complex with a cytosine-guanine base pair
- (1995) Tetrahedron Lett. , vol.52 , pp. 9521-9524
- Sasaki, S.¹ Nakashima, S.² Nagatsugi, F.³ Tanaka, Y.⁴ Hisatome, M.⁵ Maeda, M.⁶

25
- 0003433405
- Synthesis of C-azolylacetic acid esters via ethyl carbethoxyacetimidate
- (1990) Bull. Acad. Sci. USSR Div. Chem. Sci. , vol.39 , pp. 1888-1895
- Kiseleva, V.V.¹ Gakh, A.A.² Fainzilberg, A.A.³

26
- 0025151453
- Circular dichroism studies of an oligodeoxyribonucleotide containing a hairpin loop made of a hexaethylene glycol chain: Conformation and stability
- (1990) Nucleic Acids Res. , vol.18 , pp. 6353-6359
- Durand, M.¹ Chevrie, K.² Chassignol, M.³ Thuong, N.T.⁴ Maurizot, J.C.⁵

27
- 0028824854
- NMR studies of DNA duplexes singly cross-linked by different synthetic linkers
- (1995) Nucleic Acids Res. , vol.23 , pp. 4827-4835
- Altmann, S.¹ Labhardt, A.M.² Bur, D.³ Lehmann, C.⁴ Bannwarth, W.⁵ Billeter, M.⁶ Wüthrich, K.⁷ Leupin, W.⁸

28
- 0030988935
- Spectrometrically monitored selection experiments: Quantitative laser desorption mass spectrometry of small chemical libraries
- (1997) Chem. Biol. , vol.4 , pp. 63-77
- Berlin, K.¹ Jain, R.K.² Tetzlaff, C.³ Steinbeck, C.⁴ Richert, C.⁵

29
- 0030571297
- Quantitative MALDI-TOF spectrometry of oligonucleotides and a nuclease assay
- (1996) Bioorg. Med. Chem. Lett. , vol.6 , pp. 2543-2548
- Sarracino, D.¹ Richert, C.²

30
- 0034326843
- Synthesis and monitored selection of 5′-nucleobase-capped oligodeoxyribonucleotides
- (2000) Nucleic Acids Res. , vol.28 , pp. 4254-4265
- Mokhir, A.A.¹ Richert, C.²

31
- 0032539878
- Optimization of the binding properties of PNA-(5′)-DNA chimera
- (1998) Bioorg. Med. Chem. Lett. , vol.8 , pp. 663-668
- Van der Laan, A.C.¹ Havenaar, P.² Oosting, R.S.³ Kuyl-Yeheskiely, E.⁴ Uhlmann, E.⁵ Van Boom, J.H.⁶

32
- 33751127303
- Synthesis and properties of PNA/DNA chimeras
- (1996) Angew. Chem. Int. Ed. Engl. , vol.35 , pp. 2632-2635
- Uhlmann, E.¹ Will, D.W.² Breipohl, G.³ Langner, D.⁴ Ryte, A.⁵

33
- 0032476790
- PNA: Synthetic polyamide nucleic acids with unusual binding properties
- (1998) Angew. Chem. Int Ed. Engl. , vol.37 , pp. 2797-2823
- Uhlmann, E.¹ Peyman, A.² Breipohl, G.³ Will, D.W.⁴

34
- 0042558605
- Recognition of hairpin-containing single-stranded DNA by oligonucleotides containing internal acridine derivatives
- (1999) Bioconjug. Chem. , vol.10 , pp. 439-446
- Francois, J.C.¹ Hélène, C.²

35
- 0033767565
- Rapid genotyping via MALDI-monitored nuclease selection from probe libraries
- (2000) Nat. Biotechnol. , vol.18 , pp. 1213-1216
- Stoerker, J.¹ Mayo, J.² Tetzlaff, C.N.³ Sarracino, D.A.⁴ Schwope, I.⁵ Richert, C.⁶

36
- 0000001398
- Recognition of DNA, RNA, and proteins by circular oligonucleotides
- (1998) Acc. Chem. Res. , vol.31 , pp. 502-510
- Kool, E.T.¹

37
- 0001492195
- A porphyrin embedded in DNA
- (1998) J. Org. Chem. , vol.63 , pp. 1527-1535
- Berlin, K.¹ Jain, R.K.² Simon, M.D.³ Richert, C.⁴

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