Ribosomal protein gene cluster analysis in eubacterium genomics: Homology between Sinorhizobium meliloti strain 1021 and Bacillus subtilis

Nucleic Acids Research

Volumn 29, Issue 13, 2001, Pages 2747-2756

  Barloy Hubler, F ^a   Lelaure, V ^a   Galibert, F ^a  

^a UNIVERSITÉ DE RENNES 1   (France)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; DNA; RIBOSOME PROTEIN; RIBOSOME PROTEIN S10; RNA 16S; RNA POLYMERASE ALPHA; RNA POLYMERASE BETA; SPC PROTEIN; STREPTOMYCIN; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ARTICLE; BACILLUS SUBTILIS; BACTERIAL GENETICS; CHROMOSOME; CONTROLLED STUDY; DATA BASE; DNA SEQUENCE; EUBACTERIUM; EUROPE; GENE CLUSTER; GENE FUNCTION; GENE ORDER; GENE SEQUENCE; GENE STRUCTURE; GENETIC PROCEDURES; GRAM NEGATIVE BACTERIUM; NONHUMAN; NORTH AMERICA; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; SINORHIZOBIUM MELILOTI; SOIL MICROFLORA; SYMBIOSIS;

ALPHAPROTEOBACTERIA; BACILLUS SUBTILIS; BACTERIA (MICROORGANISMS); NEGIBACTERIA; POSIBACTERIA; RHIZOBIUM; SINORHIZOBIUM; SINORHIZOBIUM MELILOTI; SINORHIZOBIUM MELILOTI 1021;

EID: 0035394646     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/29.13.2747     Document Type: Article

References (33)

1. The common nodABC genes of Rhizobium meliloti are host-range determinants
2. Regulation of symbiotic root nodule development
3. Sequencing the Sinorhizobium meliloti genome
4. Electrophoretic separation of the three Rhizobium meliloti replicons
5. Identification of a single promoter in E. coli for rplJ, rplL and rpoBC
6. Organization of a Sulfolobus solfataricus gene cluster homologous to the Escherichia coli str operon
7. Nucleotide sequence of four genes encoding ribosomal proteins from the 'S10 and spectinomycin' operon equivalent region in the archaebacterium Halobacterium marismortui
8. Ribosomal genes in Escherichia coli
9. The ribosome - A macromolecular machine par excellence
10. The evolution of prokaryotic ferredoxins with a general method correcting for unobserved substitutions in less branched lineages
11. Early evolution of cytochrome be complexes
12. Ribosomal RNA: A key to phylogeny
13. Physical and genetic characterization of symbiotic and auxotrophic mutants of Rhizobium meliloti induced by transposon Tn5 mutagenesis
14. Towards a reconstruction of ancestral genomes by gene cluster alignement
15. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
16. The CLUSTALwindows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
17. The neighbor-joining method: A new method for reconstructing phylogenetic trees
18. Duplication of the tuf gene: A new insight into the phylogeny of eubacteria
19. Gene-cluster analysis in chloroplast genomics
20. Genetic and transcriptional organization of the region encoding the beta subunit of Bacillus subtilis RNA polymerase
21. DNA sequence of the promoter region for the alpha ribosomal protein operon in Escherichia coli
22. RNA determinants required for L4-mediated attenuation control of the S10 r-protein operon of Escherichia coli
23. A hairpin structure upstream of the terminator hairpin required for ribosomal protein L4-mediated attenuation control of the S10 operon of Escherichia coli
24. Analysis of the Bacillus subtilis S10 ribosomal protein gene cluster identifies two promoters that may be responsible for transcription of the entire 15-kilobase S10-spc-alpha cluster
25. Genome phylogeny based on gene content
26. Compositional correlation studies among the three different codon positions in 12 bacterial genomes
27. Evolutionary instability of operon structures disclosed by sequence comparisons of complete microbiol genomes
28. Implication of gene distribution in the bacterial chromosome for the bacterial cell factory
29. Spatio-temporal distribution of naturally occurring Bacillus spp. and other bacteria on the phylloplane of soybean under field conditions
30. The complete genome sequence of the gram-positive bacterium Bacillus subtilis
31. High-resolution physical map of the pSymb megaplasmid and comparison of the three replicons of Sinorhizobium meliloti strain 1021
32. Bacterial genomics and adaptation to life on plants: Implications for the evolution of pathogenicity and symbiosis