메뉴 건너뛰기




Volumn 179, Issue 22, 1997, Pages 7046-7054

Analysis of the Bacillus subtilis S10 ribosomal protein gene cluster identifies two promoters that may be responsible for transcription of the entire 15-kilobase S10-spc-α cluster

Author keywords

[No Author keywords available]

Indexed keywords

RIBOSOME PROTEIN;

EID: 0030862382     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/jb.179.22.7046-7054.1997     Document Type: Article
Times cited : (43)

References (42)
  • 1
    • 0024670076 scopus 로고
    • Gene encoding the alpha core subunit of Bacillus subtilis RNA polymerase is cotranscribed with the genes for initiation factor 1 and ribosomal proteins B, S13, S11, and L17
    • Boylan, S. A., J.-W. Suh, S. M. Thomas, and C. W. Price. 1989. Gene encoding the alpha core subunit of Bacillus subtilis RNA polymerase is cotranscribed with the genes for initiation factor 1 and ribosomal proteins B, S13, S11, and L17. J. Bacteriol. 171:2553-2562.
    • (1989) J. Bacteriol. , vol.171 , pp. 2553-2562
    • Boylan, S.A.1    Suh, J.-W.2    Thomas, S.M.3    Price, C.W.4
  • 2
    • 0014414325 scopus 로고
    • RNA chain growth-rate in Escherichia coli
    • Bremer, H., and D. Yuan. 1968. RNA chain growth-rate in Escherichia coli. J. Mol. Biol. 38:163-180.
    • (1968) J. Mol. Biol. , vol.38 , pp. 163-180
    • Bremer, H.1    Yuan, D.2
  • 3
    • 0018956590 scopus 로고
    • Analysis of gene control signals by DNA fusion and cloning in Escherichia coll
    • Casadaban, M. J., and S. N. Cohen. 1980. Analysis of gene control signals by DNA fusion and cloning in Escherichia coll. J. Mol. Biol. 138:179-207.
    • (1980) J. Mol. Biol. , vol.138 , pp. 179-207
    • Casadaban, M.J.1    Cohen, S.N.2
  • 4
    • 0024206339 scopus 로고
    • Translational regulation of the spc operon in Escherichia coli: Identification and structural analysis of the target site for S8 repressor protein
    • Cerretti, D. P., L. C. Mattheakis, K. R. Kearney, L. Vu, and M. Nomura. 1988. Translational regulation of the spc operon in Escherichia coli: identification and structural analysis of the target site for S8 repressor protein. J. Mol. Biol. 204:309-329.
    • (1988) J. Mol. Biol. , vol.204 , pp. 309-329
    • Cerretti, D.P.1    Mattheakis, L.C.2    Kearney, K.R.3    Vu, L.4    Nomura, M.5
  • 5
    • 0027197631 scopus 로고
    • Elucidation of regulatory elements that control damage induction and competence induction of the Bacillus subtilis SOS system
    • Cheo, D. L, K. W. Bayles, and R, E. Yasbin. 1993. Elucidation of regulatory elements that control damage induction and competence induction of the Bacillus subtilis SOS system. J. Bacteriol. 175:5907-5915.
    • (1993) J. Bacteriol. , vol.175 , pp. 5907-5915
    • Cheo, D.L.1    Bayles, K.W.2    Yasbin, R.E.3
  • 6
    • 0002657642 scopus 로고
    • DNA replication and the division cycle in Escherichia coli
    • Clark, D. J., and O. Maaløe. 1967. DNA replication and the division cycle in Escherichia coli. J. Mol. Biol. 23:99-112.
    • (1967) J. Mol. Biol. , vol.23 , pp. 99-112
    • Clark, D.J.1    Maaløe, O.2
  • 8
    • 0023414494 scopus 로고
    • Autogenous control of the S10 ribosomal protein operon of Escherichia coli: Genetic dissection of transcriptional and post-transcriptional regulation
    • Freedman, L. P., J. M. Zengel, R. H. Archer, and L. Lindahl. 1987. Autogenous control of the S10 ribosomal protein operon of Escherichia coli: genetic dissection of transcriptional and post-transcriptional regulation. Proc. Natl. Acad. Sci. USA 84:6516-6520.
    • (1987) Proc. Natl. Acad. Sci. USA , vol.84 , pp. 6516-6520
    • Freedman, L.P.1    Zengel, J.M.2    Archer, R.H.3    Lindahl, L.4
  • 9
    • 0024270439 scopus 로고
    • Interaction of Escherichia coli ribosomal protein S8 with its binding sites in ribosomal RNA and messenger RNA
    • Gregory, R. R., P. B. F. Cahill, D. L. Thurlow, and R. A. Zimmermann. 1988. Interaction of Escherichia coli ribosomal protein S8 with its binding sites in ribosomal RNA and messenger RNA. J. Mol. Biol. 204:295-307.
    • (1988) J. Mol. Biol. , vol.204 , pp. 295-307
    • Gregory, R.R.1    Cahill, P.B.F.2    Thurlow, D.L.3    Zimmermann, R.A.4
  • 10
    • 0025089521 scopus 로고
    • Cloning and analysis of the Bacillus subtilis rpsD gene, encoding ribosomal protein S4
    • Grundy, F. J., and T. M. Henkin. 1990. Cloning and analysis of the Bacillus subtilis rpsD gene, encoding ribosomal protein S4. J. Bacteriol. 172:6372-6379.
    • (1990) J. Bacteriol. , vol.172 , pp. 6372-6379
    • Grundy, F.J.1    Henkin, T.M.2
  • 11
    • 0025799424 scopus 로고
    • The rpsD gene, encoding ribosomal protein S4, is autogenously regulated in Bacillus subtilis
    • Grundy, F. J., and T. M. Henkin. 1991. The rpsD gene, encoding ribosomal protein S4, is autogenously regulated in Bacillus subtilis. J. Bacteriol. 173: 4595-4602.
    • (1991) J. Bacteriol. , vol.173 , pp. 4595-4602
    • Grundy, F.J.1    Henkin, T.M.2
  • 12
    • 0026673546 scopus 로고
    • Characterization of the Bacillus subtilis rpsD regulatory target site
    • Grundy, F. J., and T. M. Henkin. 1992. Characterization of the Bacillus subtilis rpsD regulatory target site. J. Bacteriol. 174:6763-6770.
    • (1992) J. Bacteriol. , vol.174 , pp. 6763-6770
    • Grundy, F.J.1    Henkin, T.M.2
  • 14
    • 0021331731 scopus 로고
    • Genetic mapping of a mutation causing an alteration in Bacillus subtilis ribosomal protein S4
    • Henkin, T. M., and G. H. Chambliss. 1984. Genetic mapping of a mutation causing an alteration in Bacillus subtilis ribosomal protein S4. Mol. Gen. Genet. 193:364-369.
    • (1984) Mol. Gen. Genet. , vol.193 , pp. 364-369
    • Henkin, T.M.1    Chambliss, G.H.2
  • 15
    • 0024449327 scopus 로고
    • Cloning and analysis of the spc ribosomal protein operon of Bacillus subtilis: Comparison with the spc operon of Escherichia coli
    • Henkin, T. M., S. H. Moon, L. C. Mattheakis, and M. Nomura. 1989. Cloning and analysis of the spc ribosomal protein operon of Bacillus subtilis: comparison with the spc operon of Escherichia coli. Nucleic Acids Res. 17:7469-7486.
    • (1989) Nucleic Acids Res. , vol.17 , pp. 7469-7486
    • Henkin, T.M.1    Moon, S.H.2    Mattheakis, L.C.3    Nomura, M.4
  • 16
    • 0026631654 scopus 로고
    • Primary structures of ribosomal proteins L3 and L4 from Bacillus stearothermophilus
    • Herwig, S., V. Kraft, and B. Wittmann-Liebold. 1992. Primary structures of ribosomal proteins L3 and L4 from Bacillus stearothermophilus. Eur. J. Biochem. 207:877-885.
    • (1992) Eur. J. Biochem. , vol.207 , pp. 877-885
    • Herwig, S.1    Kraft, V.2    Wittmann-Liebold, B.3
  • 17
    • 0019947243 scopus 로고
    • Ribosomal protein S4 acts in trans as a translational repressor to regulate expression of the α operon in Escherichia coli
    • Jinks-Robertson, S., and M. Nomura. 1982. Ribosomal protein S4 acts in trans as a translational repressor to regulate expression of the α operon in Escherichia coli. J. Bacteriol. 151:193-202.
    • (1982) J. Bacteriol. , vol.151 , pp. 193-202
    • Jinks-Robertson, S.1    Nomura, M.2
  • 18
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685.
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 19
    • 0029845147 scopus 로고    scopus 로고
    • Ribosomal protein L4 from Escherichia coli utilizes different determinants for its structural and regulatory functions
    • Li, X., L. Lindahl, and J. M. Zengel. 1996. Ribosomal protein L4 from Escherichia coli utilizes different determinants for its structural and regulatory functions. RNA 2:24-37.
    • (1996) RNA , vol.2 , pp. 24-37
    • Li, X.1    Lindahl, L.2    Zengel, J.M.3
  • 20
    • 0020537075 scopus 로고
    • Transcription of the S10 ribosomal protein operon is regulated by an attenuator in the leader
    • Lindahl, L., R. Archer, and J. M. Zengel. 1983. Transcription of the S10 ribosomal protein operon is regulated by an attenuator in the leader. Cell 33:241-248.
    • (1983) Cell , vol.33 , pp. 241-248
    • Lindahl, L.1    Archer, R.2    Zengel, J.M.3
  • 21
    • 0025148255 scopus 로고
    • Transcriptional organization of the S10, spc and α operons of Escherichia coli
    • Lindahl, L., F. Sor, R. H. Archer, M. Nomura, and J. M. Zengel. 1990. Transcriptional organization of the S10, spc and α operons of Escherichia coli. Biochim. Biophys. Acta 1050:337-342.
    • (1990) Biochim. Biophys. Acta , vol.1050 , pp. 337-342
    • Lindahl, L.1    Sor, F.2    Archer, R.H.3    Nomura, M.4    Zengel, J.M.5
  • 22
    • 0018583181 scopus 로고
    • Operon-specific regulation of ribosomal protein synthesis in Escherichia coli
    • Lindahl, L., and J. M. Zengel. 1979. Operon-specific regulation of ribosomal protein synthesis in Escherichia coli. Proc. Natl. Acad. Sci. USA 76:6542-6546.
    • (1979) Proc. Natl. Acad. Sci. USA , vol.76 , pp. 6542-6546
    • Lindahl, L.1    Zengel, J.M.2
  • 25
    • 14444276085 scopus 로고
    • Feedback regulation of ribosome biosynthesis in Escherichia coli
    • D. Bissell, G. Deho, G. Sironi, and A. Torriani (ed.), Elsevier, Amsterdam, The Netherlands
    • Nomura, M. 1988. Feedback regulation of ribosome biosynthesis in Escherichia coli, p. 97-107. In D. Bissell, G. Deho, G. Sironi, and A. Torriani (ed.), Gene expression and regulation: the legacy of Luigi Gorini. Elsevier, Amsterdam, The Netherlands.
    • (1988) Gene Expression and Regulation: The Legacy of Luigi Gorini , pp. 97-107
    • Nomura, M.1
  • 26
    • 0019858807 scopus 로고
    • Regulation of the S10 ribosomal protein operon in E. coli: Nucleotide sequence at the start of the operon
    • Olins, P. O., and M. Nomura. 1981. Regulation of the S10 ribosomal protein operon in E. coli: nucleotide sequence at the start of the operon. Cell 26:205-211.
    • (1981) Cell , vol.26 , pp. 205-211
    • Olins, P.O.1    Nomura, M.2
  • 27
    • 0018908441 scopus 로고
    • DNA sequence of the promoter region for the α ribosomal protein operon in Escherichia coli
    • Post, L. E., A. E. Arfsten, G. R. Davis, and M. Nomura. 1980. DNA sequence of the promoter region for the α ribosomal protein operon in Escherichia coli. J. Biol. Chem. 255:4653-4659.
    • (1980) J. Biol. Chem. , vol.255 , pp. 4653-4659
    • Post, L.E.1    Arfsten, A.E.2    Davis, G.R.3    Nomura, M.4
  • 28
    • 0018094642 scopus 로고
    • DNA sequences of promoter regions for the str and spc ribosomal protein operons in Escherichia coli
    • Post, L. E., A. E. Arfsten, F. Reusser, and M. Nomura. 1978. DNA sequences of promoter regions for the str and spc ribosomal protein operons in Escherichia coli. Cell 15:215-229.
    • (1978) Cell , vol.15 , pp. 215-229
    • Post, L.E.1    Arfsten, A.E.2    Reusser, F.3    Nomura, M.4
  • 30
    • 0028925851 scopus 로고
    • RNA determinants required for L4-mediated attenuation control of the S10 r-protein operon of Escherichia coli
    • Sha, Y, L. Lindahl, and J. M. Zengel. 1995. RNA determinants required for L4-mediated attenuation control of the S10 r-protein operon of Escherichia coli. J. Mol. Biol. 245:486-498.
    • (1995) J. Mol. Biol. , vol.245 , pp. 486-498
    • Sha, Y.1    Lindahl, L.2    Zengel, J.M.3
  • 31
    • 0028960129 scopus 로고
    • Role of NusA in L4-mediated attenuation control of the S10 r-protein operon of Escherichia coli
    • Sha, Y., L. Lindahl, and J. M. Zengel. 1995. Role of NusA in L4-mediated attenuation control of the S10 r-protein operon of Escherichia coli. J. Mol. Biol. 245:474-485.
    • (1995) J. Mol. Biol. , vol.245 , pp. 474-485
    • Sha, Y.1    Lindahl, L.2    Zengel, J.M.3
  • 33
    • 0023712805 scopus 로고
    • Secondary structure of the leader transcript from the Escherichia coli S10 ribosomal protein operon
    • Shen, P., J. M. Zengel, and L. Lindahl. 1988. Secondary structure of the leader transcript from the Escherichia coli S10 ribosomal protein operon. Nucleic Acids Res. 16:8905-8924.
    • (1988) Nucleic Acids Res. , vol.16 , pp. 8905-8924
    • Shen, P.1    Zengel, J.M.2    Lindahl, L.3
  • 34
    • 0343337627 scopus 로고    scopus 로고
    • Genetic and transcriptional organization of the Bacillus subtilis spc-α region
    • Suh, J. W., S. A. Boylan, S. H. Oh, and C. W. Price. 1996. Genetic and transcriptional organization of the Bacillus subtilis spc-α region. Gene 169: 17-23.
    • (1996) Gene , vol.169 , pp. 17-23
    • Suh, J.W.1    Boylan, S.A.2    Oh, S.H.3    Price, C.W.4
  • 35
  • 36
    • 0025375756 scopus 로고
    • Escherichia coli ribosomal protein L4 stimulates transcription termination at a specific site in the leader of the S10 operon independent of L4-mediated inhibition of translation
    • Zengel, J. M., and L. Lindahl. 1990. Escherichia coli ribosomal protein L4 stimulates transcription termination at a specific site in the leader of the S10 operon independent of L4-mediated inhibition of translation. J. Mol. Boil. 213:67-78.
    • (1990) J. Mol. Boil. , vol.213 , pp. 67-78
    • Zengel, J.M.1    Lindahl, L.2
  • 37
    • 0025269449 scopus 로고
    • Ribosomal protein L4 stimulates in vitro termination of transcription at a NusA-dependent terminator in the S10 operon leader
    • Zengel, J. M., and L. Lindahl. 1990. Ribosomal protein L4 stimulates in vitro termination of transcription at a NusA-dependent terminator in the S10 operon leader. Proc. Natl. Acad. Sci. USA 87:2675-2679.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 2675-2679
    • Zengel, J.M.1    Lindahl, L.2
  • 38
    • 0027078857 scopus 로고
    • Ribosomal protein L4 and transcription factor NusA have separable roles in mediating termination of transcription within the leader of the S10 operon of E. coli
    • Zengel, J. M., and L. Lindahl. 1992. Ribosomal protein L4 and transcription factor NusA have separable roles in mediating termination of transcription within the leader of the S10 operon of E. coli. Genes Dev. 6:2655-2662.
    • (1992) Genes Dev. , vol.6 , pp. 2655-2662
    • Zengel, J.M.1    Lindahl, L.2
  • 39
    • 14444277281 scopus 로고
    • Regulation of the eleven gene S10 ribosomal protein operon by the 50S subunit protein L4
    • K. Nierhaus, F. Franceschi, and A. P. Subramanian (ed.), Plenum Press, New York, N.Y.
    • Zengel, J. M., and L. Lindahl. 1993. Regulation of the eleven gene S10 ribosomal protein operon by the 50S subunit protein L4, p. 131-138. In K. Nierhaus, F. Franceschi, and A. P. Subramanian (ed.), The translational apparatus: structure, function, regulation, evolution. Plenum Press, New York, N.Y.
    • (1993) The Translational Apparatus: Structure, Function, Regulation, Evolution , pp. 131-138
    • Zengel, J.M.1    Lindahl, L.2
  • 40
    • 0028251157 scopus 로고
    • Diverse mechanisms for regulating ribosomal protein synthesis in Escherichia coli
    • Zengel, J. M., and L. Lindahl. 1994. Diverse mechanisms for regulating ribosomal protein synthesis in Escherichia coli. Prog. Nucleic Acid Res. Mol. Biol. 47:331-370.
    • (1994) Prog. Nucleic Acid Res. Mol. Biol. , vol.47 , pp. 331-370
    • Zengel, J.M.1    Lindahl, L.2
  • 41
    • 0029402274 scopus 로고
    • Regulation of the Escherichia coli S10 ribosomal protein operon by heterologous L4 ribosomal proteins
    • Zengel, J. M., D. Vorozheikina, X. Li, and L. Lindahl. 1995. Regulation of the Escherichia coli S10 ribosomal protein operon by heterologous L4 ribosomal proteins. Biochem. Cell Biol. 73:1105-1112.
    • (1995) Biochem. Cell Biol. , vol.73 , pp. 1105-1112
    • Zengel, J.M.1    Vorozheikina, D.2    Li, X.3    Lindahl, L.4
  • 42
    • 0024477261 scopus 로고
    • On finding all suboptimal foldings of an RNA molecule
    • Zuker, M. 1989. On finding all suboptimal foldings of an RNA molecule. Science 244:48-52.
    • (1989) Science , vol.244 , pp. 48-52
    • Zuker, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.