Transcriptional organization and dynamic expression of the hbpCAD genes, which encode the first three enzymes for 2-hydroxybiphenyl degradation in Pseudomonas azelaica HBP1

Journal of Bacteriology

Volumn 183, Issue 1, 2001, Pages 270-279

  Jaspers, M C M ^a   Schmid, A ^a   Sturme, M H J ^a   Goslings, D A M ^a   Kohler, H P E ^a   Van der Meer, J R ^a  

^a SWISS FEDERAL INSTITUTE OF AQUATIC SCIENCE AND TECHNOLOGY   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

2 HYDROXYBIPHENYL; BACTERIAL ENZYME; BACTERIAL ENZYME HBPA; BACTERIAL ENZYME HBPC; BACTERIAL ENZYME HBPD; INTEGRATION HOST FACTOR; SIGMA FACTOR; TRANSACTIVATOR PROTEIN; UNCLASSIFIED DRUG;

ARTICLE; BIOLUMINESCENCE; GENE CLUSTER; GENETIC ORGANIZATION; NONHUMAN; NORTHERN BLOTTING; PRIORITY JOURNAL; PROMOTER REGION; PSEUDOMONAS; TRANSACTIVATION;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; BASE SEQUENCE; BIODEGRADATION, ENVIRONMENTAL; BIPHENYL COMPOUNDS; BLOTTING, NORTHERN; DNA PRIMERS; DNA-BINDING PROTEINS; DNA-DIRECTED RNA POLYMERASES; ESCHERICHIA COLI PROTEINS; GENE EXPRESSION REGULATION, BACTERIAL; GENES, BACTERIAL; INTEGRATION HOST FACTORS; MOLECULAR SEQUENCE DATA; PROMOTER REGIONS (GENETICS); PSEUDOMONAS; RECOMBINANT FUSION PROTEINS; RNA POLYMERASE SIGMA 54; SIGMA FACTOR; TRANS-ACTIVATION (GENETICS); TRANSCRIPTION, GENETIC;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; NEGIBACTERIA; PSEUDOMONAS AZELAICA; VIBRIO HARVEYI;

EID: 0035185541     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.183-1.270-279.2001     Document Type: Article

References (52)

1. Activation of the Pseudomonas TOL plasmid upper pathway operon
2. Adaptation of Comamonas testosteroni TA441 to utilize phenol: Organization and regulation of the genes involved in phenol degradation
3. Identification of the Pseudomonas stutzeri OX1 toluene-o-xylene monooxygenase regulatory gene (touR) and of its cognate promoter
4. 54-dependent promoter sequences
5. Dynamics of denitrification activity of Paracoccus denitrificans in continuous culture during aerobic-anaerobic changes
6. M13 and pUC vectors with new unique restriction sites for cloning
7. 54-RNA polymerase to the Pu promoter of Pseudomonas putida: Role of IHF and αCTD
8. Cascade regulation of the toluene-3-monooxygenase operon (tbuA1UBVA2C) of Burkholderia pickettii PKO1: Role of the tbuA1 promoter (PtbuA1) in the expression of its cognate activator, TbuT
9. 54 promoter Pu of Pseudomonas putida
10. Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid
11. 54-dependent Pu promoter of TOL plasmid
12. Activation of the transcriptional regulator XylR of Pseudomonas putida by release of repression between functional domains
13. Use of transcriptional fusions to monitor gene expression: A cautionary tale
14. Integration host factor: A protein for all reasons
15. Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in gram-negative bacteria
16. The integration host factor stimulates interaction of RNA polymerase with NifA, the transcriptional activator for nitrogen fixation operons
17. Phenols, catechols, and quinones
18. HbpR, a new member of the XylR/DmpR subclass within the NtrC family of bacterial transcriptional activators, regulates expression of 2-hydroxybiphenyl metabolism in Pseudomonas azelaica HBP1
19. Degradation of 2-hydroxybiphenyl and 2,2'-dihydroxybiphenyl by Pseudomonas sp. strain HBP1
20. Metabolism of 2,2'-dihydroxybiphenyl by Pseudomonas sp. strain HBP1: Production and consumption of 2,2',3-trihydroxybiphenyl
21. Selection of Pseudomonas sp. strain HBP1 Prp for metabolism of 2-propylphenol and elucidation of the degradative pathway
22. Site-specific deletions of chromosomally located DNA segments with the multimer resolution system of broad-host-range plasmid RP4
23. Prokaryotic transcriptional enhancers and enhancer-binding proteins
24. 54 (ntrA)-dependent genes is probably united by a common mechanism
25. Fine-structure deletion map and complementation analysis of the glnA-glnL-glnG region in Escherichia coli
26. HU and integration host factor function as auxiliary proteins in cleavage of phage lambda cohesive ends by terminase
27. 54 bacterial enhancer-binding protein family: Mechanism of action and phylogenetic relationship of their functional domains
28. Cytotoxic effects of postharvest fungicides, ortho-phenylphenol, thiabendazole and imazalil, on isolated rat hepatocytes
29. The HU and IHF proteins: Accessory factors for complex protein-DNA assemblies
30. 54-dependent activator DmpR
31. The amino-terminal domain of the prokaryotic enhancer-binding protein XylR is a specific intramolecular repressor
32. 54-dependent activator XylR triggers a protein multimerization cycle catalyzed by UAS DNA
33. 54-dependent transcriptional activator of Pseudomonas putida
34. 54-promoters of the TOL plasmid of Pseudomonas putida
35. Co-regulation by bent DNA
36. Oligomerization of NtrC at the glnA enhancer is required for transcriptional activation
37. Transcriptional control of the Pseudomonas TOL plasmid catabolic operons is achieved through an interplay of host factors and plasmid-encoded regulators
38. Int-B13, an unusual site-specific recombinase of the bacteriophage P4 integrase family, is responsible for chromosomal insertion of the 105-kilobase clc element of Pseudomonas sp. strain B13
39. A third recognition element in bacterial promoters: DNA binding by the α subunit of RNA polymerase
40. Expression, inducer spectrum, domain structure, and function of MopR, the regulator of phenol degradation in Acinetobacter calcoaceticus NCIB8250
41. 54-dependent regulators: Depression as a control mechanism
42. Cloning and nucleotide sequence of the gene encoding the positive regulator (DmpR) of the phenol catabolic pathway encoded by pVI150 and identification of DmpR as a member of the NtrC family of transcriptional activators
43. Development and characterization of a whole-cell bioluminescent sensor for bioavailable middle-chain alkanes in contaminated groundwater samples
44. Purification and characterization of 2-hydroxybiphenyl 3-monooxygenase, a novel NADH-dependent, FAD-containing aromatic hydroxylase from Pseudomonas azelaica HBP1
45. 54-dependent Po promoter controlling the Pseudomonas-derived (methyl)phenol dmp operon of pVI150
46. Effect of scavengers of active oxygen species on cell damage caused in CHO-K1 cells by phenylhydroquinone, an o-phenylphenol metabolite
47. Evolution of novel metabolic pathways for the degradation of chloroaromatic compounds
48. The Q-linker: A class of interdomain sequences found in bacterial multidomain regulatory proteins