Identification and characterization of Thermus thermophilus HB8 RuvA protein, the subunit of the RuvAB protein complex that promotes branch migration of Holliday junctions

Genes and Genetic Systems

Volumn 75, Issue 5, 2000, Pages 233-243

  Ohnishi, T ^a   Iwasaki, H ^a   Ishino, Y ^a   Kuramitsu, S ^a   Nakata, A ^a   Shinagawa, H ^a  

^a OSAKA UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN SUBUNIT; RECA PROTEIN; RUVA PROTEIN; RUVB PROTEIN; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ANIMAL CELL; ARTICLE; BACTERIUM IDENTIFICATION; CELL MIGRATION; COMPLEX FORMATION; DNA PROTEIN COMPLEX; DNA REPAIR; ESCHERICHIA COLI; GENETIC COMPLEMENTATION; HOLLIDAY JUNCTION; MOLECULAR CLONING; NONHUMAN; OPEN READING FRAME; PROTEIN ANALYSIS; PROTEIN BINDING; THERMOPHILIC BACTERIUM; THERMUS THERMOPHILUS;

ADENOSINE TRIPHOSPHATASES; ADENOSINE TRIPHOSPHATE; AMINO ACID SEQUENCE; BACTERIAL PROTEINS; CLONING, MOLECULAR; DNA; DNA HELICASES; DNA REPAIR; DNA-BINDING PROTEINS; DOSE-RESPONSE RELATIONSHIP, DRUG; ELECTROPHORESIS, POLYACRYLAMIDE GEL; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; GENETIC COMPLEMENTATION TEST; HYDROLYSIS; MOLECULAR SEQUENCE DATA; OPERON; PHYLOGENY; PLASMIDS; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; TEMPERATURE; THERMUS THERMOPHILUS; ULTRAVIOLET RAYS;

ANIMALIA; BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; NEGIBACTERIA; THERMUS THERMOPHILUS;

EID: 0034546675     PISSN: 13417568     EISSN: None     Source Type: Journal    
DOI: 10.1266/ggs.75.233     Document Type: Article

References (36)

1. Crystal structure of the Holliday junction DNA in complex with a single RuvA tetramer
2. Pedigrees of some mutant strains of Escherichia coli K-12
3. Nucleotide sequencing of the ruv region of Escherichia coli K-12 reveals a LexA regulated operon encoding two genes
4. Formation and resolution of recombination intermediates by E. coli RecA and RuvC proteins
5. BAD promoter
6. Molecular analysis of the Pseudomonas aeruginosa genes, ruvA, ruvB and ruvC, involved in processing of homologous recombination intermediates
7. Role of Walker Motif A of RuvB protein in promoting branch migration of Holliday junctions. Walker motif a mutations affect ATP binding, ATP hydrolyzing, and DNA binding activities of RuvB
8. Abortive recombination in Escherichia coli ruv mutants blocks chromosome partitioning
9. Overproduction, purification, and ATPase activity of the Escherichia coli RuvB protein involved in DNA repair
10. Escherichia coli RuvA and RuvB proteins specifically interact with Holliday junctions and promote branch migration
11. Escherichia coli RuvC protein is an endonuclease that resolves the Holliday structure
12. Biochemistry of homologous recombination in Escherichia coli
13. A new version of the RDP (Ribosomal Database Project)
14. Resolution of Holliday intermediates in recombination and DNA repair: Indirect suppression of ruvA, ruvB, and ruvC mutations
15. Allosteric effects of RuvA protein, ATP, and DNA on RuvB protein-mediated ATP hydrolysis
16. Functional analyses of the domain structure in the Holliday junction binding protein RuvA
17. Interaction of Escherichia coli RuvA and RuvB proteins with synthetic Holliday junctions
18. Crystal structure of DNA recombination protein RuvA and a model for its binding to the Holliday junction
19. The neighbor-joining method: A new method for reconstructing phylogenetic trees
20. RuvAB acts at arrested replication forks
21. Genetic recombination in E. coli: RuvC protein cleaves Holliday junctions at resolution hotspots in vitro
22. Holliday junction processing in bacteria: Insights from the evolutionary conservation of RuvABC, RecG, and RusA
23. Resolution of Holliday junctions in Escherichia coli: Identification of the ruvC gene product as a 19-kilodalton protein
24. SOS-inducible DNA repair proteins, RuvA and RuvB, of Escherichia coli: Functional interactions between RuvA and RuvB for ATP hydrolysis and renaturation of the cruciform structure in supercoiled DNA
25. Escherichia coli RuvA and RuvB proteins involved in recombination repair: Physical properties and interactions with DNA
26. Analysis of substrate specificity of the RuvC Holliday junction resolvase with synthetic Holliday junction
27. Processing the Holliday junction in homologous recombination
28. Structure and regulation of the Escherichia coli ruv operon involved in DNA repair and recombination
29. The Escherichia coli RuvB branch migration protein forms double hexameric rings around DNA
30. Use of T7 RNA polymerase to direct expression of cloned genes
31. Molecular analysis of the Escherichia coli ruvC gene, which encodes a Holliday junction-specific endonuclease
32. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
33. Cloning, sequencing, and expression of ruvB and characterization of RuvB proteins from two distantly related thermophilic eubacteria
34. ATP-dependent branch migration of Holliday junctions promoted by the RuvA and RuvB proteins of E. coli
35. Processing of recombination intermediates by the RuvABC proteins
36. Novel properties of the Thermus thermophilus RuvB protein, which promotes branch migration of Holliday junctions