Crystal structure of the holliday junction DNA in complex with a single RuvA tetramer

Proceedings of the National Academy of Sciences of the United States of America

Volumn 97, Issue 15, 2000, Pages 8257-8262

  Ariyoshi, Mariko ^a   Nishino, Tatsuya ^a   Iwasaki, Hiroshi ^b   Shinagawa, Hideo ^b   Morikawa, Kosuke ^a,c  

^a BIOMOL ENG RESEARCH INSTITUTE   (Japan)

^b OSAKA UNIVERSITY   (Japan)

^c JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; DNA BINDING PROTEIN;

ARTICLE; CRYSTAL STRUCTURE; DNA RECOMBINATION; ESCHERICHIA COLI; HOLLIDAY JUNCTION; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA BINDING;

BACTERIAL PROTEINS; CRYSTALLOGRAPHY, X-RAY; DNA; DNA HELICASES; DNA-BINDING PROTEINS; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; MACROMOLECULAR SUBSTANCES; MODELS, MOLECULAR; NUCLEIC ACID CONFORMATION; OLIGODEOXYRIBONUCLEOTIDES;

EID: 0034682545     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.140212997     Document Type: Article

References (32)

1. Holliday, R. (1964) Genet. Res. 5, 282-304.
2. Shinagawa, H. & Iwasaki, H. (1996) Trends Biochem. Sci. 21, 107-111.
3. West, S. C. (1997) Annu. Rev. Genet. 31, 213-244.
4. Sharpies, G. J., Ingleston, S. M. & Lloyd, R. G. (1999) J. Bacteriol. 181, 5543-5550.
5. Yu, X., West, S. C. & Egelman, E. H. (1997) J. Mol. Biol. 266, 217-222.
6. Davies, A. A. & West, S. C. (1998) Curr. Biol. 8, 725-727.
7. van Gool, A. J., Shah, R., Mezard, C. & West, S. C. (1998) EMBO J. 17, 1838-1845.
8. van Gool, A. J., Hajibagheri, N. M., Stasiak, A. & West, S. C. (1999) Genes Dev. 13, 1861-70.
9. Rafferty, J. B., Sedelnikova, S. E., Hargreaves, D., Artymiuk, P. J., Baker, P. J., Sharpies, G. J., Mahdi, A. A., Lloyd, R. G. & Rice, D. W. (1996) Science 274, 415-421.
10. Nishino, T., Ariyoshi, M., Iwasaki, H., Shinagawa, H. & Morikawa, K. (1998) Structure (London) 6, 11-21.
11. Nishino, T., Iwasaki, H., Kataoka, M., Ariyoshi, M., Fujita, T., Shinagawa, H. & Morikawa, K. (2000) J. Mol. Biol. 298, 407-416.
12. Parsons, C. A., Tsaneva, I., Lloyd, R. G. & West, S. C. (1992) Proc. Natl. Acad. Sci. USA 89, 5452-6.
13. Whitby, M. C., Bolt, E. L., Chan, S. N. & Lloyd, R. G. (1996) J. Mol. Biol. 264, 878-890.
14. Rice, D. W., Rafferty, J. B., Artymiuk, P. J. & Lloyd, R. G. (1997) Curr. Opin. Struct. Biol. 7, 798-803.
15. Hargreaves, D., Rice, D. W., Sedelnikova, S. E., Artymiuk, P. J., Lloyd, R. G. & Rafferty, J. B. (1998) Nat. Struct. Biol. 5, 441-446.
16. Roe, S. M., Barlow, T., Brown, T., Oram, M., Keeley, A., Tsaneva, I. R. & Pearl, L. H. (1998) Mol. Cell 2, 361-372.
17. Iwasaki, H., Takahagi, M., Nakata, A. & Shinagawa, H. (1992) Genes Dev. 6, 2214-20.
18. Otwinowski, Z. & Minor, W. (1997) Methods Enzymol. 276, 307-326.
19. Navaza, J. (1994) Acta Crystallogr. A 50, 157-163.
20. Otwinowski, Z. (1991 ) in In Proceedings of the CCP4 Study Weekend., eds. Wolf, W., Evans, P. R. & Leslie, A. G. W. (SERC Daresbury Laboratory, Warringtom, U.K.), pp. 80-88.
21. Collaborative Computational Project, Number 4 (1994) Acta Crystallogr. D 50, 760-763.
22. Read, R. J. (1986) Acta Crystallogr. A 42, 140-149.
23. Brunger, A. T., Adams, P. D., Clore, G. M., Delano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J.-S., Kuszewski, J., Nilges, M., Pannu, N. S., et al. (1998) Acta. Crystallogr. D 54, 905-921.
24. Nicholls, A. (1993) GRASP (Columbia Univ., New York).
25. Doherty, A. J., Serpell, L. C. & Ponting, C. P. (1996) Nucleic Acids Res. 24, 2488-2497.
26. George, H., Mezard, C., Stasiak, A. & West, S. C. (1999) J. Mol. Biol. 293, 505-519.
27. George, H., Kuraoka, I., Nauman, D. A., Kobertz, W. R., Wood, R. & West, S. C. (2000) Curr. Biol. 10, 103-106.
28. Egelman, E. H. (1998) J. Struct. Biol. 124, 123-128.
29. Janin, J. (1999) Structure (London) 7, R277-R279.
30. Zerbib, D., Mezard, C., George, H. & West, S. C. (1998) J. Mol. Biol. 281, 621-630.
31. Ariyoshi, M., Vassylyev, D. G., Iwasaki, H., Nakamura, H., Shinagawa, H. & Morikawa, K. (1994) Cell 78, 1063-1072.
32. Morikawa, K. (1998) Nucleic Acids Mol. Biol. 12, 275-299.