-
1
-
-
0030308089
-
On combining protein sequences and nucleic acid sequences in phylogenetic analysis: The homeobox protein case
-
AGOSTI, D., D. JACOBS, AND R. DESALLE. 1996. On combining protein sequences and nucleic acid sequences in phylogenetic analysis: the homeobox protein case. Cladistics 12:65-82.
-
(1996)
Cladistics
, vol.12
, pp. 65-82
-
-
Agosti, D.1
Jacobs, D.2
Desalle, R.3
-
2
-
-
0028154142
-
Mitochondrial DNA sequence divergence and phylogenetic relationships among eight chromosome races of the Sceloporus grammicus complex (Phrynosomatidae) in central Mexico
-
ARÉVALO, E., S. K. DAVIS, AND J. W. SITES, JR. 1994. Mitochondrial DNA sequence divergence and phylogenetic relationships among eight chromosome races of the Sceloporus grammicus complex (Phrynosomatidae) in central Mexico. Syst. Biol. 43:387-418.
-
(1994)
Syst. Biol.
, vol.43
, pp. 387-418
-
-
Arévalo, E.1
Davis, S.K.2
Sites Jr., J.W.3
-
3
-
-
0032148618
-
Data sets, partitions, and characters: Philosophies and procedures for analyzing multiple data sets
-
BALLARD, J. W. O., M. K. THAYER, A. F. NEWTON, JR., AND E. R. GRISMER. 1998. Data sets, partitions, and characters: philosophies and procedures for analyzing multiple data sets. Syst. Biol. 47:367-396.
-
(1998)
Syst. Biol.
, vol.47
, pp. 367-396
-
-
Ballard, J.W.O.1
Thayer, M.K.2
Newton Jr., A.F.3
Grismer, E.R.4
-
4
-
-
0030076730
-
What does electrophoretic variation tell us about protein variation?
-
BARBADILLA, A., L. M. KING, AND R. C. LEWONTIN. 1996. What does electrophoretic variation tell us about protein variation? Mol. Biol. Evol. 13:427-432.
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 427-432
-
-
Barbadilla, A.1
King, L.M.2
Lewontin, R.C.3
-
6
-
-
0030807365
-
Mitochondrial DNA sequence-based phylogeny and the evolution of viviparity in the Sceloporus scalaris group (Reptilia, Squamata)
-
BENABIB, M., K. M. KJER, AND J. W. SITES, JR. 1997. Mitochondrial DNA sequence-based phylogeny and the evolution of viviparity in the Sceloporus scalaris group (Reptilia, Squamata). Evolution 51:1262-1275.
-
(1997)
Evolution
, vol.51
, pp. 1262-1275
-
-
Benabib, M.1
Kjer, K.M.2
Sites Jr., J.W.3
-
7
-
-
11944258802
-
Coding chromosomal data for phylogenetic analysis: Phylogenetic resolution of the Pan-Homo-Gorilla trichotomy
-
BOROWIK, O. A. 1995. Coding chromosomal data for phylogenetic analysis: phylogenetic resolution of the Pan-Homo-Gorilla trichotomy. Syst. Biol. 44:563-570.
-
(1995)
Syst. Biol.
, vol.44
, pp. 563-570
-
-
Borowik, O.A.1
-
8
-
-
0000367652
-
The limits of amino acid sequence data in angiosperm phylogenetic reconstruction
-
BREMER, K. 1988. The limits of amino acid sequence data in angiosperm phylogenetic reconstruction. Evolution 42:795-803.
-
(1988)
Evolution
, vol.42
, pp. 795-803
-
-
Bremer, K.1
-
9
-
-
12044257391
-
Partitioning and combining data in phylogenetic analysis
-
BULL, J. J., J. P. HUELSENBECK, C. W. CUNNINGHAM, D. L. SWOFFORD, AND P. J. WADDELL. 1993. Partitioning and combining data in phylogenetic analysis. Syst. Biol. 42:384-397.
-
(1993)
Syst. Biol.
, vol.42
, pp. 384-397
-
-
Bull, J.J.1
Huelsenbeck, J.P.2
Cunningham, C.W.3
Swofford, D.L.4
Waddell, P.J.5
-
10
-
-
12044258419
-
Weighting, partitioning, and combining characters in phylogenetic analysis
-
CHIPPINDALE, P., AND J. J. WIENS. 1994. Weighting, partitioning, and combining characters in phylogenetic analysis. Syst. Biol. 43:278-287.
-
(1994)
Syst. Biol.
, vol.43
, pp. 278-287
-
-
Chippindale, P.1
Wiens, J.J.2
-
11
-
-
12044252488
-
Compositional bias, character-state bias, and character-state reconstruction using parsimony
-
COLLINS, T. M., P. H. WIMBERGER, AND J. P. NAYLOR. 1994. Compositional bias, character-state bias, and character-state reconstruction using parsimony. Syst. Biol. 43:482-196.
-
(1994)
Syst. Biol.
, vol.43
, pp. 482-1196
-
-
Collins, T.M.1
Wimberger, P.H.2
Naylor, J.P.3
-
12
-
-
0020345862
-
Gel electrophoresis and cryptic protein variation
-
COYNE, J. 1982. Gel electrophoresis and cryptic protein variation. in Isozymes Curr. Top. Biol. Med. Res. 6:1-32.
-
(1982)
Isozymes Curr. Top. Biol. Med. Res.
, vol.6
, pp. 1-32
-
-
Coyne, J.1
-
13
-
-
0030816742
-
Can tree incongruence tests predict when data should be combined?
-
CUNNINGHAM, C. W. 1997a. Can tree incongruence tests predict when data should be combined? Mol. Biol. Evol. 14:733-740.
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 733-740
-
-
Cunningham, C.W.1
-
14
-
-
0031224810
-
Is congruence between data partitions a reliable predictor of phylogenetic accurancy?
-
CUNNINGHAM, C. W. 1997b. Is congruence between data partitions a reliable predictor of phylogenetic accurancy? Syst. Biol. 46:464-478.
-
(1997)
Syst. Biol.
, vol.46
, pp. 464-478
-
-
Cunningham, C.W.1
-
15
-
-
0347129948
-
The scleral ossicles of sceloporine iguanids: A reexamination with comments on their phylogenetic significance
-
DE QUEIROZ, K. 1982. The scleral ossicles of sceloporine iguanids: a reexamination with comments on their phylogenetic significance. Herpetologica 38:302-311.
-
(1982)
Herpetologica
, vol.38
, pp. 302-311
-
-
De Queiroz, K.1
-
16
-
-
0001546577
-
Separate versus combined analysis of phylogenetic evidence
-
DE QUEIROZ, A., M. J. DONOGHUE, AND J. KIM. 1995. Separate versus combined analysis of phylogenetic evidence. Annu. Rev. Ecol. Syst. 26:657-681.
-
(1995)
Annu. Rev. Ecol. Syst.
, vol.26
, pp. 657-681
-
-
De Queiroz, A.1
Donoghue, M.J.2
Kim, J.3
-
17
-
-
0343258371
-
Diagnosis of twenty-three new species and a new genus of lizard from Lower California
-
DICKERSON, M. C. 1919. Diagnosis of twenty-three new species and a new genus of lizard from Lower California. Bull. Am. Mus. Nat. Hist. 61:461-477.
-
(1919)
Bull. Am. Mus. Nat. Hist.
, vol.61
, pp. 461-477
-
-
Dickerson, M.C.1
-
18
-
-
0001190205
-
Morphological correlations in evolution: Consequences for phylogenetic analyses
-
EMERSON, S. B., AND P. A. HASTINGS. 1998. Morphological correlations in evolution: consequences for phylogenetic analyses. Q. Rev. Biol. 73:141-162.
-
(1998)
Q. Rev. Biol.
, vol.73
, pp. 141-162
-
-
Emerson, S.B.1
Hastings, P.A.2
-
19
-
-
0002503798
-
Phylogenetic relationships within squamata
-
R. Estes and G. Pregill, eds.. Stanford Univ. Press, Stanford, California
-
ESTES, R., K. DE QUEIROZ, AND J. GAUTHIER. 1988. Phylogenetic relationships within squamata. Pages 119-281 in Phylogenetic relationships of the lizard families (R. Estes and G. Pregill, eds.). Stanford Univ. Press, Stanford, California.
-
(1988)
Phylogenetic Relationships of the Lizard Families
, pp. 119-281
-
-
Estes, R.1
De Queiroz, K.2
Gauthier, J.3
-
20
-
-
0000418006
-
A phylogeny of Iguanidae
-
R. Estes and G. Pregill, eds.. Stanford Univ. Press, Stanford, California
-
ETHERIDGE, R. E., AND K. DE QUEIROZ. 1988. A phylogeny of Iguanidae. Pages 283-368 in Phylogenetic relationships of the lizard families (R. Estes and G. Pregill, eds.). Stanford Univ. Press, Stanford, California.
-
(1988)
Phylogenetic Relationships of the Lizard Families
, pp. 283-368
-
-
Etheridge, R.E.1
De Queiroz, K.2
-
21
-
-
84963028421
-
A succesive approximations approach to character weighting
-
FARRIS, J. S. 1969. A succesive approximations approach to character weighting. Syst. Zool. 18:374-385.
-
(1969)
Syst. Zool.
, vol.18
, pp. 374-385
-
-
Farris, J.S.1
-
22
-
-
84959798530
-
Cases in which parsimony or compatibility methods will be positively misleading
-
FELSENSTEIN, J. 1978. Cases in which parsimony or compatibility methods will be positively misleading. Syst. Zool. 27:401-410.
-
(1978)
Syst. Zool.
, vol.27
, pp. 401-410
-
-
Felsenstein, J.1
-
23
-
-
0019797407
-
Evolutionary trees from DNA sequences: A maximum likelihood approach
-
FELSENSTEIN, J. 1981a. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17:368-376.
-
(1981)
J. Mol. Evol.
, vol.17
, pp. 368-376
-
-
Felsenstein, J.1
-
24
-
-
0001306645
-
A likelihood approach to character weighting and what it tells us about parsimony and compatibility
-
FELSENSTEIN, J. 1981b. A likelihood approach to character weighting and what it tells us about parsimony and compatibility. Biol. J. Linn. Soc. 16:183-196.
-
(1981)
Biol. J. Linn. Soc.
, vol.16
, pp. 183-196
-
-
Felsenstein, J.1
-
25
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
FELSENSTEIN, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
26
-
-
0002069577
-
A phylogenetic analysis and taxonomy of iguanian lizards (Reptilia: Squamata)
-
FROST, D. R., AND R. E. ETHERIDGE. 1989. A phylogenetic analysis and taxonomy of iguanian lizards (Reptilia: Squamata). Misc. Publ. Mus. Nat. Hist. Univ. Kans. 81:1-65.
-
(1989)
Misc. Publ. Mus. Nat. Hist. Univ. Kans.
, vol.81
, pp. 1-65
-
-
Frost, D.R.1
Etheridge, R.E.2
-
27
-
-
0001662427
-
Phylogeny of plecotine bats (Chiroptera: "Vespertilionidae"): summary of the evidence and proposal for a logically consistent taxonomy
-
FROST, D. R., AND R. M. TIM. 1992. Phylogeny of plecotine bats (Chiroptera: "Vespertilionidae"): summary of the evidence and proposal for a logically consistent taxonomy. Am. Mus. Novit. 3034:1-16.
-
(1992)
Am. Mus. Novit.
, vol.3034
, pp. 1-16
-
-
Frost, D.R.1
Tim, R.M.2
-
28
-
-
0031154445
-
Consistency, characters, and the likelihood of correct phylogenetic inference
-
GIVNISH, T. J., AND K. J. SYTSMA. 1997. Consistency, characters, and the likelihood of correct phylogenetic inference. Mol. Phylogenet. Evol. 7:320-330.
-
(1997)
Mol. Phylogenet. Evol.
, vol.7
, pp. 320-330
-
-
Givnish, T.J.1
Sytsma, K.J.2
-
29
-
-
0002033257
-
The origin and evolution of the peninsular herpetofauna of Baja California, Mexico
-
GRISMER, L. L. 1994a. The origin and evolution of the peninsular herpetofauna of Baja California, Mexico. Herpetol. Nat. Hist. 2:51-106.
-
(1994)
Herpetol. Nat. Hist.
, vol.2
, pp. 51-106
-
-
Grismer, L.L.1
-
30
-
-
0040454388
-
Geographic origins for the reptiles on islands in the Gulf of California, Mexico
-
GRISMER, L. L. 1994b. Geographic origins for the reptiles on islands in the Gulf of California, Mexico. Herpetol. Nat. Hist. 2:17-40.
-
(1994)
Herpetol. Nat. Hist.
, vol.2
, pp. 17-40
-
-
Grismer, L.L.1
-
31
-
-
0028071557
-
Collection of small subunit (16S and 16S-like) ribosomal RNA structures: 1994
-
GUTELL, R. R. 1994. Collection of small subunit (16S and 16S-like) ribosomal RNA structures: 1994. Nucleic Acids Res. 22:3502-3507.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 3502-3507
-
-
Gutell, R.R.1
-
32
-
-
0028261409
-
Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective
-
GUTELL, R. R., N. LARSEN, AND C. R. WOESE. 1994. Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective. Microbiol. Rev. 58:10-26.
-
(1994)
Microbiol. Rev.
, vol.58
, pp. 10-26
-
-
Gutell, R.R.1
Larsen, N.2
Woese, C.R.3
-
33
-
-
0038056926
-
-
Ph.D. Thesis, Harvard Univ., Cambridge, Massachusetts
-
HALL, W. P. 1973. Comparative population cytogenetics, speciation, and evolution of the crevice-using species of Sceloporus. Ph.D. Thesis, Harvard Univ., Cambridge, Massachusetts.
-
(1973)
Comparative Population Cytogenetics, Speciation, and Evolution of the Crevice-using Species of Sceloporus
-
-
Hall, W.P.1
-
34
-
-
4043122929
-
Chromosomes, speciation, and evolution of Mexican iguanid lizards
-
HALL, W. P. 1980. Chromosomes, speciation, and evolution of Mexican iguanid lizards. Natl. Geogr. Soc. Res. Rep. 12:309-329.
-
(1980)
Natl. Geogr. Soc. Res. Rep.
, vol.12
, pp. 309-329
-
-
Hall, W.P.1
-
35
-
-
0040018483
-
Modes of speciation and evolution in sceloporine iguanid lizards. I. Epistemology of the comparative approach and introduction to the problem
-
A. G. J. Rhodin and K. Miyata, eds.. Museum of Comparative Zoology, Harvard Univ., Cambridge, Massachusetts
-
HALL, W. P. 1983. Modes of speciation and evolution in sceloporine iguanid lizards. I. Epistemology of the comparative approach and introduction to the problem. Pages 643-679 in Advances in herpetology and evolutionary biology (A. G. J. Rhodin and K. Miyata, eds.). Museum of Comparative Zoology, Harvard Univ., Cambridge, Massachusetts.
-
(1983)
Advances in Herpetology and Evolutionary Biology
, pp. 643-679
-
-
Hall, W.P.1
-
36
-
-
0027565033
-
Relative efficiencies of the maximum likelihood, maximum parsomony, and neighbor-joining methods for estimating protein phylogeny
-
HASEGAWA, M., AND M. FUJIWARA, 1993. Relative efficiencies of the maximum likelihood, maximum parsomony, and neighbor-joining methods for estimating protein phylogeny. Mol. Phylogenet. Evol. 2:1-5.
-
(1993)
Mol. Phylogenet. Evol.
, vol.2
, pp. 1-5
-
-
Hasegawa, M.1
Fujiwara, M.2
-
37
-
-
0022376704
-
Dating the human-ape split by a molecular clock of mitochondrial DNA
-
HASEGAWA, M., H. KISHINO, AND T. YANO. 1985. Dating the human-ape split by a molecular clock of mitochondrial DNA. J. Mol. Evol. 21:160-174.
-
(1985)
J. Mol. Evol.
, vol.21
, pp. 160-174
-
-
Hasegawa, M.1
Kishino, H.2
Yano, T.3
-
38
-
-
0031729578
-
Nucleotide substitution models and estimation of phylogeny
-
HÅSTAD, O., AND M. BJÖRKLUND. 1998. Nucleotide substitution models and estimation of phylogeny. Mol. Biol. Evol. 15:1381-1389.
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 1381-1389
-
-
Håstad, O.1
Björklund, M.2
-
39
-
-
0001289465
-
Evolution of ribosomal DNA: Fifty million years of recorded history in the frog genus Rana
-
HILLIS, D. M., AND S. K. DAVIS. 1986. Evolution of ribosomal DNA: fifty million years of recorded history in the frog genus Rana. Evolution 40:1275-1288.
-
(1986)
Evolution
, vol.40
, pp. 1275-1288
-
-
Hillis, D.M.1
Davis, S.K.2
-
40
-
-
0026534986
-
Experimental phylogenetics: Generation of a known phylogeny
-
HILLIS, D. M., J. J. BULL, M. E. WHITE, M. R. BADGETT, AND I. J. MOLINEUX. 1992. Experimental phylogenetics: generation of a known phylogeny. Science 255:589-592.
-
(1992)
Science
, vol.255
, pp. 589-592
-
-
Hillis, D.M.1
Bull, J.J.2
White, M.E.3
Badgett, M.R.4
Molineux, I.J.5
-
41
-
-
0028362880
-
Applications and accuracy of molecular phylogenies
-
HILLIS, D. M., J. P. HUELSENBECK, AND C. W. CUNNINGHAM. 1994a. Applications and accuracy of molecular phylogenies. Science 264:671-677.
-
(1994)
Science
, vol.264
, pp. 671-677
-
-
Hillis, D.M.1
Huelsenbeck, J.P.2
Cunningham, C.W.3
-
43
-
-
33645762226
-
A sharper Bonferroni procedure for multiple tests of significance
-
HOCHBERG, Y. 1988. A sharper Bonferroni procedure for multiple tests of significance. Biometrika 75:800-802.
-
(1988)
Biometrika
, vol.75
, pp. 800-802
-
-
Hochberg, Y.1
-
44
-
-
11944268967
-
Performance of phylogenetic methods in simulation
-
HUELSENBECK, J. P. 1995. Performance of phylogenetic methods in simulation. Syst. Biol. 44:17-48.
-
(1995)
Syst. Biol.
, vol.44
, pp. 17-48
-
-
Huelsenbeck, J.P.1
-
45
-
-
0031436890
-
Phylogeny estimation and hypothesis testing using-maximum likelihood
-
HUELSENBECK, J. P., AND K. A. CRANDALL. 1997. Phylogeny estimation and hypothesis testing using-maximum likelihood. Annu. Rev. Ecol. Syst. 28:437-466.
-
(1997)
Annu. Rev. Ecol. Syst.
, vol.28
, pp. 437-466
-
-
Huelsenbeck, J.P.1
Crandall, K.A.2
-
46
-
-
12044255023
-
Success of phylogenetic methods in the four-taxon case
-
HUELSENBECK, J. P., AND D. M. HILLIS. 1993. Success of phylogenetic methods in the four-taxon case. Syst. Biol. 42:247-264.
-
(1993)
Syst. Biol.
, vol.42
, pp. 247-264
-
-
Huelsenbeck, J.P.1
Hillis, D.M.2
-
47
-
-
0030902563
-
Phylogenetic methods come of age: Testing hypotheses in an evolutionary context
-
HUELSENBECK, J. P., AND B. RANNALA. 1997. Phylogenetic methods come of age: testing hypotheses in an evolutionary context. Science 276:227-232.
-
(1997)
Science
, vol.276
, pp. 227-232
-
-
Huelsenbeck, J.P.1
Rannala, B.2
-
48
-
-
0002410257
-
Parametric bootstrapping in molecular phylogenetics: Applications and performance
-
J. D. Ferraris and S. R. Palumbi, eds.. Wiley, New York
-
HUELSENBECK, J. P., D. M. HILLIS, AND R. JONES. 1996a. Parametric bootstrapping in molecular phylogenetics: applications and performance. Pages 19-45 in Molecular zoology (J. D. Ferraris and S. R. Palumbi, eds.). Wiley, New York.
-
(1996)
Molecular Zoology
, pp. 19-45
-
-
Huelsenbeck, J.P.1
Hillis, D.M.2
Jones, R.3
-
50
-
-
0003410186
-
-
Academic Press, Orlando, Florida
-
INTERNATIONAL UNION OF BIOCHEMISTRY NOMENCLATURE COMMITTEE. 1984. Enzyme nomenclature, 1984. Academic Press, Orlando, Florida.
-
(1984)
Enzyme Nomenclature, 1984
-
-
-
51
-
-
0000732090
-
Evolution of protein molecular
-
H. N. Munro, ed.. Academic Press, New York
-
JUKES, T. H., AND C. R. CANTOR. 1969. Evolution of protein molecular. Pages 21-123 in Mammalian protein metabolism (H. N. Munro, ed.). Academic Press, New York.
-
(1969)
Mammalian Protein Metabolism
, pp. 21-123
-
-
Jukes, T.H.1
Cantor, C.R.2
-
52
-
-
12044253704
-
Improving the accuracy of phylogenetic estimation by combining different methods
-
KIM, J. 1993. Improving the accuracy of phylogenetic estimation by combining different methods. Syst. Biol. 42:331-340.
-
(1993)
Syst. Biol.
, vol.42
, pp. 331-340
-
-
Kim, J.1
-
53
-
-
0024307824
-
Evaluation of maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
-
KISHINO, H., AND M. HASEGAWA. 1989. Evaluation of maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J. Mol. Evol. 29:170-179.
-
(1989)
J. Mol. Evol.
, vol.29
, pp. 170-179
-
-
Kishino, H.1
Hasegawa, M.2
-
54
-
-
0029365329
-
Use of rRNA secondary structure in phylogenetic studies to identify homologous positions: An example of alignment and data presentation from the frogs
-
KJER, K. M. 1995. Use of rRNA secondary structure in phylogenetic studies to identify homologous positions: an example of alignment and data presentation from the frogs. Mol. Phylogenet. Evol. 4:314-330.
-
(1995)
Mol. Phylogenet. Evol.
, vol.4
, pp. 314-330
-
-
Kjer, K.M.1
-
55
-
-
0031452231
-
Conserved primary and secondary structural motifs of amphibian 12S rRNA, domain III
-
KJER, K. M. 1997. Conserved primary and secondary structural motifs of amphibian 12S rRNA, domain III. J. Herpetol. 31:599-604.
-
(1997)
J. Herpetol.
, vol.31
, pp. 599-604
-
-
Kjer, K.M.1
-
56
-
-
0028345871
-
Mosquito large subunit ribosomal RNA: Simultaneous alignment of primary and secondary structure
-
KJER, K. M., G. D. BALDRIDGE, AND A. M. FALLON. 1994. Mosquito large subunit ribosomal RNA: simultaneous alignment of primary and secondary structure. Biochim. Biophys. Acta 1217:147-155.
-
(1994)
Biochim. Biophys. Acta
, vol.1217
, pp. 147-155
-
-
Kjer, K.M.1
Baldridge, G.D.2
Fallon, A.M.3
-
57
-
-
0003496662
-
-
Pennsylvania State Univ., University Park, Pennsylvania
-
KUMAR, S., K. TAMURA, AND M. NEI. 1993. MEGA: molecular evolutionary genetics analysis, ver. 1.01. Pennsylvania State Univ., University Park, Pennsylvania.
-
(1993)
MEGA: Molecular Evolutionary Genetics Analysis, Ver. 1.01
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
58
-
-
0027482104
-
Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics
-
KUMAZAWA, Y., AND M. NISHIDA. 1993. Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics. J. Mol. Evol. 37:380-398.
-
(1993)
J. Mol. Evol.
, vol.37
, pp. 380-398
-
-
Kumazawa, Y.1
Nishida, M.2
-
59
-
-
0008056143
-
Numeric analysis of the lizard genus Sceloporus with special reference to cranial osteology
-
LARSEN, K. R., AND W. W. TANNER. 1974. Numeric analysis of the lizard genus Sceloporus with special reference to cranial osteology. Great Basin Nat. 34:1-41.
-
(1974)
Great Basin Nat.
, vol.34
, pp. 1-41
-
-
Larsen, K.R.1
Tanner, W.W.2
-
60
-
-
0342434834
-
Evolution of the sceloporine lizards (Iguanidae)
-
LARSEN, K. R., AND W. W. TANNER. 1975. Evolution of the sceloporine lizards (Iguanidae). Great Basin Nat. 35:1-20.
-
(1975)
Great Basin Nat.
, vol.35
, pp. 1-20
-
-
Larsen, K.R.1
Tanner, W.W.2
-
61
-
-
0026750549
-
Higher order interactions of 23S rRNA
-
LARSEN, N. 1992. Higher order interactions of 23S rRNA. Proc. Natl. Acad. Sci. USA 89:5044-5048.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 5044-5048
-
-
Larsen, N.1
-
62
-
-
0028696608
-
The comparison of morphological and molecular data in phylogenetic systematics
-
B. Schierwater, S. Streit, G. P. Wagner, and R. DeSalle, eds.. Birkhauser Verlag, Basel, Switzerland
-
LARSON, A. 1994. The comparison of morphological and molecular data in phylogenetic systematics. Pages 371-390 in Molecular ecology and evolution (B. Schierwater, S. Streit, G. P. Wagner, and R. DeSalle, eds.). Birkhauser Verlag, Basel, Switzerland.
-
(1994)
Molecular Ecology and Evolution
, pp. 371-390
-
-
Larson, A.1
-
63
-
-
0027582608
-
Screening techniques for detecting allelic variation in DNA sequences
-
LESSA, E. P., AND G. APPLEBAUM. 1993. Screening techniques for detecting allelic variation in DNA sequences. Mol. Ecol. 2:119-129.
-
(1993)
Mol. Ecol.
, vol.2
, pp. 119-129
-
-
Lessa, E.P.1
Applebaum, G.2
-
64
-
-
12044256396
-
Coding polymorphic data: Examples from allozymes and ontogeny
-
MABEE, P. M., AND J. HUMPHRIES. 1993. Coding polymorphic data: examples from allozymes and ontogeny. Syst. Biol. 42:166-181.
-
(1993)
Syst. Biol.
, vol.42
, pp. 166-181
-
-
Mabee, P.M.1
Humphries, J.2
-
65
-
-
0030515622
-
Species limits, phylogenetic relationships, and origins of viviparity in the Scalaris complex of the lizard genus Sceloporus (Phrynosomatidae: Sauria)
-
MINK, D. G., AND J. W. SITES, JR. 1996. Species limits, phylogenetic relationships, and origins of viviparity in the Scalaris complex of the lizard genus Sceloporus (Phrynosomatidae: Sauria). Herpetologica 52:551-571.
-
(1996)
Herpetologica
, vol.52
, pp. 551-571
-
-
Mink, D.G.1
Sites Jr., J.W.2
-
66
-
-
11944269526
-
Testing species phylogenies and phylogenetic methods with congruence
-
MIYAMOTO, M. M., AND W. M. FITCH. 1995a. Testing species phylogenies and phylogenetic methods with congruence. Syst. Biol. 44:64-76.
-
(1995)
Syst. Biol.
, vol.44
, pp. 64-76
-
-
Miyamoto, M.M.1
Fitch, W.M.2
-
67
-
-
0028922906
-
Testing the covarion hypothesis of molecular evolution
-
MIYAMOTO, M. M., AND W. M. FITCH. 1995b. Testing the covarion hypothesis of molecular evolution. Mol. Biol. Evol. 12:503-513.
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 503-513
-
-
Miyamoto, M.M.1
Fitch, W.M.2
-
68
-
-
11944259429
-
Evolutionary relationships within the Ensatina eschscholtzii complex confirm the ring species interpretation
-
MORITZ, C., C. J. SCHNEIDER, AND D. B. WAKE. 1992. Evolutionary relationships within the Ensatina eschscholtzii complex confirm the ring species interpretation. Syst. Biol. 41:273-291.
-
(1992)
Syst. Biol.
, vol.41
, pp. 273-291
-
-
Moritz, C.1
Schneider, C.J.2
Wake, D.B.3
-
69
-
-
0004065042
-
Two new blind snakes (Serpentes: Leptotyphlopidae) from Baja California, Mexico with a contribution to the biogeography of peninsular and insular herpetofauna
-
MURPHY, R. W. 1975. Two new blind snakes (Serpentes: Leptotyphlopidae) from Baja California, Mexico with a contribution to the biogeography of peninsular and insular herpetofauna. Proc. Calif. Acad. Sci. 40:87-92.
-
(1975)
Proc. Calif. Acad. Sci.
, vol.40
, pp. 87-92
-
-
Murphy, R.W.1
-
70
-
-
0002973056
-
Paleobiogeography and genetic differentiaton of the Baja California Herpetofauna
-
MURPHY, R. W. 1983a. Paleobiogeography and genetic differentiaton of the Baja California Herpetofauna. Occ. Pap. Calif. Acad. Sci. 137:1-48.
-
(1983)
Occ. Pap. Calif. Acad. Sci.
, vol.137
, pp. 1-48
-
-
Murphy, R.W.1
-
71
-
-
0002456637
-
The reptiles: Origins and evolution
-
T. J. Case and M. L. Cody, eds.. Univ. California Press, Los Angeles
-
MURPHY, R. W. 1983b. The reptiles: origins and evolution. Pages 130-158 in Island biogeography in the Sea of Cortez (T. J. Case and M. L. Cody, eds.). Univ. California Press, Los Angeles.
-
(1983)
Island Biogeography in the Sea of Cortez
, pp. 130-158
-
-
Murphy, R.W.1
-
72
-
-
0001872764
-
Proteins: Isozyme electrophoresis
-
D. M. Hillis, C. Moritz, and B. K. Mable, eds.. Sinauer, Sunderland, Massachusetts
-
MURPHY, R. W., J. W. SITES, JR., D. G. BUTH, AND C. H. HAUFLER. 1996. Proteins: isozyme electrophoresis. Pages 51-120 in Molecular systematics. (D. M. Hillis, C. Moritz, and B. K. Mable, eds.). Sinauer, Sunderland, Massachusetts.
-
(1996)
Molecular Systematics
, pp. 51-120
-
-
Murphy, R.W.1
Sites Jr., J.W.2
Buth, D.G.3
Haufler, C.H.4
-
73
-
-
0010894019
-
Location of ribosomal DNA in chromosomes of squamate reptiles: Systematic and evolutionary implications
-
PORTER, C. A., M. J. HAMILTON, J. W. SITES, JR., AND R. J. BAKER. 1991. Location of ribosomal DNA in chromosomes of squamate reptiles: systematic and evolutionary implications. Herpetologica 47:271-280.
-
(1991)
Herpetologica
, vol.47
, pp. 271-280
-
-
Porter, C.A.1
Hamilton, M.J.2
Sites Jr., J.W.3
Baker, R.J.4
-
74
-
-
0031773680
-
MODELTEST: Testing the model of DNA substitution
-
POSADA, D., AND K. A. CRANDALL. 1998. MODELTEST: testing the model of DNA substitution. Bioinformatics 14:817-818.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
75
-
-
0029314481
-
Phylogenetic relationships among phrynosomatid lizards as inferred from mitochondrial ribosomal DNA sequences: Substitutional bias and information content of transitions relative to transversions
-
REEDER, T. W. 1995. Phylogenetic relationships among phrynosomatid lizards as inferred from mitochondrial ribosomal DNA sequences: substitutional bias and information content of transitions relative to transversions. Mol. Phylogenet. Evol. 4:203-222.
-
(1995)
Mol. Phylogenet. Evol.
, vol.4
, pp. 203-222
-
-
Reeder, T.W.1
-
76
-
-
0001995326
-
Evolution of the lizard family Phrynosomatidae as inferred from diverse types of data
-
REEDER, T. W., AND J. J. WIENS. 1996. Evolution of the lizard family Phrynosomatidae as inferred from diverse types of data. Herpetol. Monogr. 10:43-84.
-
(1996)
Herpetol. Monogr.
, vol.10
, pp. 43-84
-
-
Reeder, T.W.1
Wiens, J.J.2
-
77
-
-
0000625869
-
Analyzing tables of statistical tests
-
RICE, W. R. 1989. Analyzing tables of statistical tests. Evolution 43:223-225.
-
(1989)
Evolution
, vol.43
, pp. 223-225
-
-
Rice, W.R.1
-
78
-
-
0025267792
-
The general stochastic model of nucleotide substitution
-
RODRÍGUEZ, F. J., J. L. OLIVER, A. MARÍN, AND J. R. MEDINA. 1990. The general stochastic model of nucleotide substitution. J. Theor. Biol. 142:485-501.
-
(1990)
J. Theor. Biol.
, vol.142
, pp. 485-501
-
-
Rodríguez, F.J.1
Oliver, J.L.2
Marín, A.3
Medina, J.R.4
-
79
-
-
0001026081
-
The amphibians and reptiles of Lower California and neighboring islands
-
SCHMIDT, K. P. 1922. The amphibians and reptiles of Lower California and neighboring islands. Bull. Am. Mus. Nat. Hist. 46:607-707.
-
(1922)
Bull. Am. Mus. Nat. Hist.
, vol.46
, pp. 607-707
-
-
Schmidt, K.P.1
-
80
-
-
0032241366
-
Molecular tests of phylogenetic taxonomies: A general procedure and example using four subfamilies of the lizard family Iguanidae
-
SCHULTE, J. A., II, J. R. MACEY, A. LARSON, AND T. J. PAPENFUSS. 1998. Molecular tests of phylogenetic taxonomies: a general procedure and example using four subfamilies of the lizard family Iguanidae. Mol. Phylogenet. Evol. 10:367-376.
-
(1998)
Mol. Phylogenet. Evol.
, vol.10
, pp. 367-376
-
-
Schulte II, J.A.1
Macey, J.R.2
Larson, A.3
Papenfuss, T.J.4
-
81
-
-
0344430832
-
Probabilism and phylogenetic inference
-
SIDDALL, M. E., AND A. G. KLUGE. 1997. Probabilism and phylogenetic inference. Cladistics 13:313-336.
-
(1997)
Cladistics
, vol.13
, pp. 313-336
-
-
Siddall, M.E.1
Kluge, A.G.2
-
82
-
-
0001802886
-
A review of phylogenetic hypotheses for lizards of the genus Scelaporus (Phrynosomatidae): Implications for ecological and evolutionary studies
-
SITES, J. W., JR., J. W. ARCHIE, C. J. COLE, AND O. FLORES-VILLELA. 1992. A review of phylogenetic hypotheses for lizards of the genus Scelaporus (Phrynosomatidae): implications for ecological and evolutionary studies. Bull. Am. Mus. Nat. Hist. 213:1-110.
-
(1992)
Bull. Am. Mus. Nat. Hist.
, vol.213
, pp. 1-110
-
-
Sites Jr., J.W.1
Archie, J.W.2
Cole, C.J.3
Flores-Villela, O.4
-
83
-
-
0002538181
-
The Mexican and Central American lizards of the genus Sceloporus
-
SMITH, H. B. 1939. The Mexican and Central American lizards of the genus Sceloporus. Zool. Ser. Field Mus. Nat. Hist. 26:1-397.
-
(1939)
Zool. Ser. Field Mus. Nat. Hist.
, vol.26
, pp. 1-397
-
-
Smith, H.B.1
-
84
-
-
0039466725
-
Combining data with different distributions of among-site rate variation
-
SULLIVAN, J. 1996. Combining data with different distributions of among-site rate variation. Syst. Biol. 45:375-380.
-
(1996)
Syst. Biol.
, vol.45
, pp. 375-380
-
-
Sullivan, J.1
-
86
-
-
0021084212
-
Phylogenetic inference from restriction endonuclease cleavage site maps with particular reference to the evolution of humans and the apes
-
TEMPLETON, A. 1983. Phylogenetic inference from restriction endonuclease cleavage site maps with particular reference to the evolution of humans and the apes. Evolution 37:221-244.
-
(1983)
Evolution
, vol.37
, pp. 221-244
-
-
Templeton, A.1
-
87
-
-
0027313056
-
Reconstructing evolution from eukaryotic small-subunit RNA sequences: Calibration of the molecular clock
-
VAN DE PEER, J., M. NEEFS, P. DE RIJK, AND R. DE WACHTER. 1993. Reconstructing evolution from eukaryotic small-subunit RNA sequences: calibration of the molecular clock. J. Mol. Evol. 37:221-232.
-
(1993)
J. Mol. Evol.
, vol.37
, pp. 221-232
-
-
Van De Peer, J.1
Neefs, M.2
De Rijk, P.3
De Wachter, R.4
-
88
-
-
0032226174
-
Can weighting improve bush trees? Models of cytochrome b evolution and the molecular systematics of pipits and wagtails (Aves: Motacillidae)
-
VOELKER, G., AND S. V. EDWARDS. 1998. Can weighting improve bush trees? Models of cytochrome b evolution and the molecular systematics of pipits and wagtails (Aves: Motacillidae). Syst. Biol. 47:589-603.
-
(1998)
Syst. Biol.
, vol.47
, pp. 589-603
-
-
Voelker, G.1
Edwards, S.V.2
-
89
-
-
0000187339
-
Phylogenetic relationships of phrynosomatid lizards and monophyly of the Sceloporus group
-
WIENS, J. J. 1993. Phylogenetic relationships of phrynosomatid lizards and monophyly of the Sceloporus group. Copeia 1993:287-299.
-
(1993)
Copeia
, vol.1993
, pp. 287-299
-
-
Wiens, J.J.1
-
90
-
-
11944270728
-
Polymorphic characters in phylogenetic systematics
-
WIENS, J. J. 1995. Polymorphic characters in phylogenetic systematics. Syst. Biol. 44:482-500.
-
(1995)
Syst. Biol.
, vol.44
, pp. 482-500
-
-
Wiens, J.J.1
-
91
-
-
0032225748
-
Does adding characters with missing data increase or decrease phylogenetic accuracy?
-
WIENS, J. J. 1998a. Does adding characters with missing data increase or decrease phylogenetic accuracy? Syst. Biol. 47:625-640.
-
(1998)
Syst. Biol.
, vol.47
, pp. 625-640
-
-
Wiens, J.J.1
-
92
-
-
0032226105
-
Combining data sets with different phylogenetic histories
-
WIENS, J. J. 1998b. Combining data sets with different phylogenetic histories. Syst. Biol. 47:568-581.
-
(1998)
Syst. Biol.
, vol.47
, pp. 568-581
-
-
Wiens, J.J.1
-
93
-
-
0029466830
-
Combining data sets with different numbers of taxa for phylogenetic analysis
-
WIENS, J. J., AND T. W. REEDER. 1995. Combining data sets with different numbers of taxa for phylogenetic analysis. Syst. Biol. 44:548-558.
-
(1995)
Syst. Biol.
, vol.44
, pp. 548-558
-
-
Wiens, J.J.1
Reeder, T.W.2
-
94
-
-
0345908689
-
Phylogeny of spiny lizards (Sceloporus) based on molecular and morphological evidence
-
WIENS, J. J., AND T. W. REEDER. 1997. Phylogeny of spiny lizards (Sceloporus) based on molecular and morphological evidence. Herpetol. Monogr. 11:1-101.
-
(1997)
Herpetol. Monogr.
, vol.11
, pp. 1-101
-
-
Wiens, J.J.1
Reeder, T.W.2
-
95
-
-
0004058778
-
Close relationship between the lizard genus Sator and Sceloporus utiformis (Reptilia, Lacertilia, Iguanidae): Electrophoretic and immunological evidence
-
WYLES, J. S., AND G. C. GORMAN. 1978. Close relationship between the lizard genus Sator and Sceloporus utiformis (Reptilia, Lacertilia, Iguanidae): electrophoretic and immunological evidence. J. Herpetol. 12:343-350.
-
(1978)
J. Herpetol.
, vol.12
, pp. 343-350
-
-
Wyles, J.S.1
Gorman, G.C.2
-
96
-
-
0029469716
-
Maximum likelihood trees from DNA sequences: A peculiar statistical estimation problem
-
YANG, Z., N. GOLDMAN, AND A. FRIDAY. 1995. Maximum likelihood trees from DNA sequences: a peculiar statistical estimation problem. Syst. Biol. 44:384-399.
-
(1995)
Syst. Biol.
, vol.44
, pp. 384-399
-
-
Yang, Z.1
Goldman, N.2
Friday, A.3
|