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Volumn 14, Issue 3, 2000, Pages 213-223

HIV-1 strains from a cohort of American subjects reveal the presence of a V2 region extension unique to slow progressors and non-progressors

Author keywords

AIDS; env V2; HIV; Long term non progressor; nef; Quasispecies; Viral diversity

Indexed keywords

VIRUS DNA;

EID: 0034054474     PISSN: 02699370     EISSN: None     Source Type: Journal    
DOI: 10.1097/00002030-200002180-00002     Document Type: Article
Times cited : (42)

References (46)
  • 2
    • 0030893912 scopus 로고    scopus 로고
    • Comparable biological and molecular determinants in HIV type 1-infected long-term non-progressors and recently infected individuals
    • 2. Balotta C, Bagnarelli P, Riva C, et al. Comparable biological and molecular determinants in HIV type 1-infected long-term non-progressors and recently infected individuals. AIDS Res Hum Retroviruses 1997, 13:337-341.
    • (1997) AIDS Res Hum Retroviruses , vol.13 , pp. 337-341
    • Balotta, C.1    Bagnarelli, P.2    Riva, C.3
  • 3
    • 0028847578 scopus 로고
    • Virologic and immunologic characterization of long-term survivors of HIV type 1 infection
    • 3. Cao Y, Qin L, Zhang L, Safrit J, Ho DD. Virologic and immunologic characterization of long-term survivors of HIV type 1 infection. New Engl J Med. 1995, 332:201-208.
    • (1995) New Engl J Med. , vol.332 , pp. 201-208
    • Cao, Y.1    Qin, L.2    Zhang, L.3    Safrit, J.4    Ho, D.D.5
  • 4
    • 0023989956 scopus 로고
    • Biological features of HIV-1 that correlate with virulence in the host
    • 4. Cheng-Mayer C, Seto D, Tateno M, Levy JA. Biological features of HIV-1 that correlate with virulence in the host. Science 1988, 240:80-82.
    • (1988) Science , vol.240 , pp. 80-82
    • Cheng-Mayer, C.1    Seto, D.2    Tateno, M.3    Levy, J.A.4
  • 5
    • 0028804160 scopus 로고
    • Genomic structure of an attenuated quasispecies of HIV-1 from a blood transfusion donor and recipients
    • 5. Deacon NJ, Tsykin A, Solomon A, et al. Genomic structure of an attenuated quasispecies of HIV-1 from a blood transfusion donor and recipients. Science 1995, 270:988-991.
    • (1995) Science , vol.270 , pp. 988-991
    • Deacon, N.J.1    Tsykin, A.2    Solomon, A.3
  • 6
    • 0000715746 scopus 로고    scopus 로고
    • Slower evolution of HIV-1 quasispecies during progression to AIDS
    • 6. Delwart EL, Pan H, Sheppard HW, et al. Slower evolution of HIV-1 quasispecies during progression to AIDS. J. Virol 1997, 17;7498-7505.
    • (1997) J. Virol , vol.17 , pp. 7498-7505
    • Delwart, E.L.1    Pan, H.2    Sheppard, H.W.3
  • 7
    • 0028307509 scopus 로고
    • Non-progression in HIV infection
    • 7. Easterbrook PJ. Non-progression in HIV infection. AIDS 1994, 8:1179-1182.
    • (1994) AIDS , vol.8 , pp. 1179-1182
    • Easterbrook, P.J.1
  • 8
    • 0029155437 scopus 로고
    • Persistence of attenuated rev genes in an HIV-1 infected asymptomatic individual
    • 8. Iversen AKN, Shaper EG, Rodrigo A, et al. Persistence of attenuated rev genes in an HIV-1 infected asymptomatic individual. J Virol 1995, 69:5743-5753.
    • (1995) J Virol , vol.69 , pp. 5743-5753
    • Iversen, A.K.N.1    Shaper, E.G.2    Rodrigo, A.3
  • 9
    • 0032944985 scopus 로고    scopus 로고
    • CD8+ cell derived anti-human immunodeficiency virus inhibitory factor
    • 9. Barker E. CD8+ cell derived anti-human immunodeficiency virus inhibitory factor. J Infect Diseases 1999, 179 (suppl 3):S485-S488.
    • (1999) J Infect Diseases , vol.179 , Issue.SUPPL. 3
    • Barker, E.1
  • 10
    • 13044251834 scopus 로고    scopus 로고
    • Lack of infection in HIV exposed individuals is associated with a strong CD8+ cell noncytotoxic anti HIV response
    • 10. Strabford SA, Skurnick J, Louria D, et al. Lack of infection in HIV exposed individuals is associated with a strong CD8+ cell noncytotoxic anti HIV response. Proc Natl Acad Sci USA 1999, 96:1030-1035.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 1030-1035
    • Strabford, S.A.1    Skurnick, J.2    Louria, D.3
  • 11
    • 0030861904 scopus 로고    scopus 로고
    • Contrasting genetic influences of CCR2 and CCR5 variants on HIV-1 infection and disease progression
    • 11. Smith MW, Dean M, Carrington M, et al. Contrasting genetic influences of CCR2 and CCR5 variants on HIV-1 infection and disease progression. Science 1997; 227:959-965.
    • (1997) Science , vol.227 , pp. 959-965
    • Smith, M.W.1    Dean, M.2    Carrington, M.3
  • 12
    • 0028861377 scopus 로고
    • Studies in subjects with long-term nonprogressive human immunodeficiency virus infection
    • 12. Pantaleo G, Menzo S, Vaccarezza M, et al. Studies in subjects with long-term nonprogressive human immunodeficiency virus infection. N Engl J Med 1995, 332:209-216.
    • (1995) N Engl J Med , vol.332 , pp. 209-216
    • Pantaleo, G.1    Menzo, S.2    Vaccarezza, M.3
  • 13
    • 0030057730 scopus 로고    scopus 로고
    • Neutralizing and infection-enhancing antibody responses to human immunodeficiency virus type 1 in long-term non-progressors
    • 13. Montefiori DC, Pantaleo G, Fink LM, et al. Neutralizing and infection-enhancing antibody responses to human immunodeficiency virus type 1 in long-term non-progressors. J Infect Dis 1996, 173:60-67.
    • (1996) J Infect Dis , vol.173 , pp. 60-67
    • Montefiori, D.C.1    Pantaleo, G.2    Fink, L.M.3
  • 14
    • 0030593031 scopus 로고    scopus 로고
    • Toward an understanding of the correlates of protective immunity to HIV infection
    • 14. Haynes BF, Pantaleo G, Fauci AS. Toward an understanding of the correlates of protective immunity to HIV infection. Science 1996, 271:324-328.
    • (1996) Science , vol.271 , pp. 324-328
    • Haynes, B.F.1    Pantaleo, G.2    Fauci, A.S.3
  • 15
    • 0031298109 scopus 로고    scopus 로고
    • HIV entry and tropism: The chemokine receptor connection
    • 15. Berger EA. HIV entry and tropism: the chemokine receptor connection. AIDS 1997, 11 (suppl A):53-59.
    • (1997) AIDS , vol.11 , Issue.SUPPL. A , pp. 53-59
    • Berger, E.A.1
  • 16
    • 0030281680 scopus 로고    scopus 로고
    • An HIV-1 infected long-term non-progressor (LTNP): Molecular analysis of HIV-1 strains in the vpr and nef genes
    • 16. Saksena NK, Ge YC, Wang B, et al. An HIV-1 infected long-term non-progressor (LTNP): molecular analysis of HIV-1 strains in the vpr and nef genes. Ann Acad Medicine 1996, 25: 848-854.
    • (1996) Ann Acad Medicine , vol.25 , pp. 848-854
    • Saksena, N.K.1    Ge, Y.C.2    Wang, B.3
  • 17
    • 0028835788 scopus 로고
    • Brief report: Absence of intact nef sequences in a long-term survivor with nonprogressive HIV-1 infection
    • 17. Kirchhoff F, Greenough TC, Brettler DB, Sullivan JL, Desrosiers RC. Brief report: absence of intact nef sequences in a long-term survivor with nonprogressive HIV-1 infection. N Engl J Med 1995, 332:228-232.
    • (1995) N Engl J Med , vol.332 , pp. 228-232
    • Kirchhoff, F.1    Greenough, T.C.2    Brettler, D.B.3    Sullivan, J.L.4    Desrosiers, R.C.5
  • 18
    • 0028908766 scopus 로고
    • Characterization of nef sequences in long-term survivors of human immunodeficiency virus type 1 infection
    • 18. Huang Y, Zhang L, Ho DD. Characterization of nef sequences in long-term survivors of human immunodeficiency virus type 1 infection. J Virol 1995, 69:93-100.
    • (1995) J Virol , vol.69 , pp. 93-100
    • Huang, Y.1    Zhang, L.2    Ho, D.D.3
  • 19
    • 0029019603 scopus 로고
    • Defective accessory genes in HIV-1 infected LTNP lacking reasonable virus
    • 19. Michael NL, Chang G, D'Arcy L. Defective accessory genes in HIV-1 infected LTNP lacking reasonable virus. J Virol 1995, 69:4228-4236.
    • (1995) J Virol , vol.69 , pp. 4228-4236
    • Michael, N.L.1    Chang, G.2    D'Arcy, L.3
  • 20
    • 0030904127 scopus 로고    scopus 로고
    • RNA and DNA sequence analysis of the nef gene of HIV type 1 strains from the first HIV type 1-infected long-term nonprogressing mother-child pair
    • 20. Saksena NK, Ge YC, Wang B, et al. RNA and DNA sequence analysis of the nef gene of HIV type 1 strains from the first HIV type 1-infected long-term nonprogressing mother-child pair. AIDS Res Hum Retroviruses 1997, 13:729-732.
    • (1997) AIDS Res Hum Retroviruses , vol.13 , pp. 729-732
    • Saksena, N.K.1    Ge, Y.C.2    Wang, B.3
  • 21
    • 0030247883 scopus 로고    scopus 로고
    • Gene defects at the C-terminus of the vpr gene of HIV-1 in LTNP mother-child pair: In vivo evolution of vpr quasispecies in blood and plasma
    • 21. Wang B, Ge YC, Palasanthiran P, et al. Gene defects at the C-terminus of the vpr gene of HIV-1 in LTNP mother-child pair: In vivo evolution of vpr quasispecies in blood and plasma. Virology 1996, 223:224-232.
    • (1996) Virology , vol.223 , pp. 224-232
    • Wang, B.1    Ge, Y.C.2    Palasanthiran, P.3
  • 23
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • 23. Thompson JD, Higgins DG, and Gibson TJ. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acid Res 1994, 22:4673-4680.
    • (1994) Nucleic Acid Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 24
    • 0032519395 scopus 로고    scopus 로고
    • Evolution of HIV envelope sequences in infected individuals with differing disease progression profiles
    • 24. Shankarappa R, Gupta P, Learn GH, et al. Evolution of HIV envelope sequences in infected individuals with differing disease progression profiles. Virology 1998, 241:251-259.
    • (1998) Virology , vol.241 , pp. 251-259
    • Shankarappa, R.1    Gupta, P.2    Learn, G.H.3
  • 26
    • 0030917941 scopus 로고    scopus 로고
    • In vivo sequence variability of HIV-1 env gp120. Association of V2 extension with slow disease progression
    • 26. Shioda T, Oka S, Xiu X, et al. In vivo sequence variability of HIV-1 env gp120. Association of V2 extension with slow disease progression. J Virol 1997, 71:4871-4881.
    • (1997) J Virol , vol.71 , pp. 4871-4881
    • Shioda, T.1    Oka, S.2    Xiu, X.3
  • 27
    • 15844388931 scopus 로고    scopus 로고
    • Homozygous defect in HIV-1 coreceptor accounts for resistance of some multiply-exposed individuals to HIV-1 infection
    • 27. Liu R, Paxton WA, Choe S, et al. Homozygous defect in HIV-1 coreceptor accounts for resistance of some multiply-exposed individuals to HIV-1 infection. Cell 1996, 86:367-377.
    • (1996) Cell , vol.86 , pp. 367-377
    • Liu, R.1    Paxton, W.A.2    Choe, S.3
  • 28
    • 0028826072 scopus 로고
    • Intrahost human immunodeficiency virus type 1 evolution is related to length of the immunocompetent period
    • 28. Lukashov VV, Kuiken CL, Goudsmit J. Intrahost human immunodeficiency virus type 1 evolution is related to length of the immunocompetent period. J Virol 1995, 69:6911-6916.
    • (1995) J Virol , vol.69 , pp. 6911-6916
    • Lukashov, V.V.1    Kuiken, C.L.2    Goudsmit, J.3
  • 29
    • 0025743306 scopus 로고
    • Importance of the nef gene for maintenance of high viral loads and for the development of AIDS
    • 29. Kestler III HW, Ringler DJ, Mori K, et al. Importance of the nef gene for maintenance of high viral loads and for the development of AIDS. Cell 1991, 65:651-662.
    • (1991) Cell , vol.65 , pp. 651-662
    • Kestler H.W. III1    Ringler, D.J.2    Mori, K.3
  • 30
    • 0027957797 scopus 로고
    • Upstream V3 sequences in SIV are selectively deleted in vivo in the absence of an intact nef gene
    • 30. Kirchhoff F, Kestler III HW, and Desrosiers RC. Upstream V3 sequences in SIV are selectively deleted in vivo in the absence of an intact nef gene. J Virol 1994, 63:2031-2037.
    • (1994) J Virol , vol.63 , pp. 2031-2037
    • Kirchhoff, F.1    Kestler H.W. III2    Desrosiers, R.C.3
  • 31
    • 0031979771 scopus 로고    scopus 로고
    • Grossly defective nef gene sequences in a human immunodeficiency virus-1 seropositive LTNP
    • 31. Salvi R, Garbuglia AR, Caro AD, et al. Grossly defective nef gene sequences in a human immunodeficiency virus-1 seropositive LTNP. J Virol 1998, 72:3646-3657.
    • (1998) J Virol , vol.72 , pp. 3646-3657
    • Salvi, R.1    Garbuglia, A.R.2    Caro, A.D.3
  • 32
    • 0013658784 scopus 로고
    • Construction and in vitro properties of SIVmac mutants with deletions in the nonessential genes
    • 32. Gibbs JS, Regier DA, Desrosiers RC. Construction and in vitro properties of SIVmac mutants with deletions in the nonessential genes. AIDS Res Hum Retroviruses 1994, 12:1982-1986.
    • (1994) AIDS Res Hum Retroviruses , vol.12 , pp. 1982-1986
    • Gibbs, J.S.1    Regier, D.A.2    Desrosiers, R.C.3
  • 33
    • 0031575533 scopus 로고    scopus 로고
    • Genetic characterization of vif, vpr, and vpu sequences from long-term survivors of HIV-1 infection
    • 33. Zhang L, Huang Y, Yuan H, Tuttleton S, Ho DD. Genetic characterization of vif, vpr, and vpu sequences from long-term survivors of HIV-1 infection. Virology 1997, 228:340-349.
    • (1997) Virology , vol.228 , pp. 340-349
    • Zhang, L.1    Huang, Y.2    Yuan, H.3    Tuttleton, S.4    Ho, D.D.5
  • 34
    • 0033519616 scopus 로고    scopus 로고
    • Immunologic and virologic status after 14 to 18 years of infection with an attenuated strain of HIV-1: A report from the Sydney blood bank cohort
    • 34. Learmont JL, Geczy AF, Mills J, et al. Immunologic and virologic status after 14 to 18 years of infection with an attenuated strain of HIV-1: A report from the Sydney blood bank cohort. New Engl J Med 1999, 340:17151-17722.
    • (1999) New Engl J Med , vol.340 , pp. 17151-17722
    • Learmont, J.L.1    Geczy, A.F.2    Mills, J.3
  • 35
    • 0033590405 scopus 로고    scopus 로고
    • Declining CD4 t-cell counts in a person infected with nef-deleted HIV-1
    • 35. Greenough TC, Sullivan JL, Desroisiers RC. Declining CD4 T-cell counts in a person infected with nef-deleted HIV-1. New Engl J Med 1999, 230: 236-237.
    • (1999) New Engl J Med , vol.230 , pp. 236-237
    • Greenough, T.C.1    Sullivan, J.L.2    Desroisiers, R.C.3
  • 36
    • 0031031308 scopus 로고    scopus 로고
    • Region-specific changes, gene duplications, and random deletions in the nef gene from HIV type 1-infected brain tissues and blood of a demented patient
    • 36. Saksena NK, Wang B, Ge YC, et al. Region-specific changes, gene duplications, and random deletions in the nef gene from HIV type 1-infected brain tissues and blood of a demented patient. AIDS Res Hum Retroviruses 1997, 13:111-116.
    • (1997) AIDS Res Hum Retroviruses , vol.13 , pp. 111-116
    • Saksena, N.K.1    Wang, B.2    Ge, Y.C.3
  • 37
    • 0024428278 scopus 로고
    • Influence of asparagine-linked oligosaccharides on antigenicity, processing and cell surface expression of HSV-1 glycoprotein D
    • 37. Sodora DL, Cohen GH, Eisenberg RJ. Influence of asparagine-linked oligosaccharides on antigenicity, processing and cell surface expression of HSV-1 glycoprotein D. J Virol 1989, 63:5184-5193.
    • (1989) J Virol , vol.63 , pp. 5184-5193
    • Sodora, D.L.1    Cohen, G.H.2    Eisenberg, R.J.3
  • 38
    • 0021683576 scopus 로고
    • Carbohydrate dramatically influences immune reactivity of antisera to viral glycoprotein antigens
    • 38. Alexander S, Elder JH. Carbohydrate dramatically influences immune reactivity of antisera to viral glycoprotein antigens. Science 1984, 226:1328-1332.
    • (1984) Science , vol.226 , pp. 1328-1332
    • Alexander, S.1    Elder, J.H.2
  • 39
    • 0032551631 scopus 로고    scopus 로고
    • A unique, naturally occurring single-amino acid mutation in HIV-1 type-1 V3 loop can discriminate between its cytopathicity and replication in vivo and in vitro
    • 39. Wang B, Jozwiak R, Ge YC, Saksena, NK. A unique, naturally occurring single-amino acid mutation in HIV-1 type-1 V3 loop can discriminate between its cytopathicity and replication in vivo and in vitro. AIDS Res and Hum Retroviruses 1998, 14:1019-1021.
    • (1998) AIDS Res and Hum Retroviruses , vol.14 , pp. 1019-1021
    • Wang, B.1    Jozwiak, R.2    Ge, Y.C.3    Saksena, N.K.4
  • 40
    • 16944366209 scopus 로고    scopus 로고
    • Molecular analyses of human immunodeficiency virus type 1 V3 region quasispecies derived from plasma and peripheral blood mononuclear cells of the first long-term-nonprogressing mother and child pair
    • 40. Wang B, Ge YC, Jozwiak R, et al. Molecular analyses of human immunodeficiency virus type 1 V3 region quasispecies derived from plasma and peripheral blood mononuclear cells of the first long-term-nonprogressing mother and child pair. J Infect Dis 1997, 175:1510-1015.
    • (1997) J Infect Dis , vol.175 , pp. 1510-11015
    • Wang, B.1    Ge, Y.C.2    Jozwiak, R.3
  • 41
    • 0006513651 scopus 로고    scopus 로고
    • Adaptive evolution of HIV-1 during natural course of infection
    • 41. Wolinsky SM, Korber BTM, Neumann AU, et al. Adaptive evolution of HIV-1 during natural course of infection. Science 1996, 272:637-642.
    • (1996) Science , vol.272 , pp. 637-642
    • Wolinsky, S.M.1    Korber, B.T.M.2    Neumann, A.U.3
  • 42
    • 0026089184 scopus 로고
    • Macrophage and T-cell line tropism of HIV is determined by specific region of the env gp120 gene
    • 42. Shioda T, Levy JA, Cheng Mayer C. Macrophage and T-cell line tropism of HIV is determined by specific region of the env gp120 gene. Nature 1991, 349:167-169.
    • (1991) Nature , vol.349 , pp. 167-169
    • Shioda, T.1    Levy, J.A.2    Cheng Mayer, C.3
  • 43
    • 0026606727 scopus 로고
    • Phenotype-associated sequence variation in the third variable domain of the human immunodeficiency virus type 1 gp120 molecule
    • 43. Fouchier RA, Groenink M, Kootstra NA, et al. Phenotype-associated sequence variation in the third variable domain of the human immunodeficiency virus type 1 gp120 molecule. J Virol 1992, 66:3183-3187.
    • (1992) J Virol , vol.66 , pp. 3183-3187
    • Fouchier, R.A.1    Groenink, M.2    Kootstra, N.A.3
  • 44
    • 0025783669 scopus 로고
    • Identification of the envelope V3 loop as the primary determinant of cell tropism in HIV-1
    • 44. Hwang SS, Boyle TJ, Lyerly HK, Cullen BR. Identification of the envelope V3 loop as the primary determinant of cell tropism in HIV-1. Science 1991, 253:71-74.
    • (1991) Science , vol.253 , pp. 71-74
    • Hwang, S.S.1    Boyle, T.J.2    Lyerly, H.K.3    Cullen, B.R.4
  • 45
    • 0032546952 scopus 로고    scopus 로고
    • A conserved HIV-gp120 glycoprotein structure involved in chemokine receptor binding
    • 45. Rizzuto CD, Wyatt R, Hernandez-Ramos N, et al. A conserved HIV-gp120 glycoprotein structure involved in chemokine receptor binding. Science 1998, 280:1949-1953.
    • (1998) Science , vol.280 , pp. 1949-1953
    • Rizzuto, C.D.1    Wyatt, R.2    Hernandez-Ramos, N.3
  • 46
    • 0032546844 scopus 로고    scopus 로고
    • The HIV-1 envelope glycoproteins: Fusogens, antigens and immunogens
    • 46. Wyatt R, Sodroski J. The HIV-1 envelope glycoproteins: fusogens, antigens and immunogens. Science 1998, 280:1884-1888.
    • (1998) Science , vol.280 , pp. 1884-1888
    • Wyatt, R.1    Sodroski, J.2


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