RNA and DNA sequence analysis of the nef gene of HIV type 1 strains from the first HIV type 1-infected long-term nonprogressing mother-child pair

AIDS Research and Human Retroviruses

Volumn 13, Issue 8, 1997, Pages 729-732

  Saksena, Nitin K ^a   Ge, Ying Chun ^a   Wang, Bin ^a   Xiang, Shi Hua ^b   Ziegler, John ^a   Palasanthiran, Pamela ^a   Bolton, Wayne ^c   Cunningham, Anthony L ^a  

^a WESTMEAD HOSPITAL   (Australia)

^b SYDNEY CHILDREN'S HOSPITAL   (Australia)

^c NSW Red Cross ^*  (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; DNA; RNA;

ADULT; ANTIBODY DETECTION; ARTICLE; BLOOD TRANSFUSION; BREAST FEEDING; CASE REPORT; DNA SEQUENCE; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS 1; HUMAN IMMUNODEFICIENCY VIRUS INFECTION; INFANT; NONHUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RNA SEQUENCE; VIRUS CULTURE; VIRUS TRANSMISSION;

EID: 0030904127     PISSN: 08892229     EISSN: None     Source Type: Journal    
DOI: 10.1089/aid.1997.13.729     Document Type: Article

References (11)

1. Deacon NJ, Tsykin A, Solomon A, et al.: Genomic structure of an attenuated quasispecies of HIV-1 from blood transfusion donor and recipients. Science 1995;270:988-991.
2. Michael NL, Chang G, D'Arcy LA, Ehrenberg PK, Mariani R, Busch MP, Birx DL, and Schwartz DH: Defective accessory genes in a HIV-1 infected long-term survivor lacking recoverable virus. J Virol 1995;69:4228-4236.
3. Wang B, Chun Ge Y, Palasanthiran P, Xiang SH, Ziegler J, Dwyer DE, Randle C, Dowton D, Cunningham AL, and Saksena NK: Gene defects clustered at the C-terminus of the vpr gene of HIV-1 in long-term non-progressing mother and child pair: In vivo evolution of vpr quasispecies in blood and plasma. Virology 1996; 223:324-332.
4. Ziegler JB, Cooper DA, Johnson RO, and Gold J: Postnatal transmission of AIDS-associated retrovirus from mother to infant. Lancet 1985;20:896-897.
5. Saksena NK, Ge YC, Herve V, Diop O, Miranda-Saksena M, Mathiot C, and Digoutte JP: AIDS Res Hum Retroviruses 1995;10: 1265-1267.
6. Felsenstein J: Phylogenies from molecular sequences: Inference and reliability. Annu Rev Genet 1988;22:521-565.
7. Saitou N and Nei M: The neighbor joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 1987; 8:406-425.
8. Kirchhoff F, Kestler HW, and Desrosiers RC: Upstream U3 sequences in SIV are selectively deleted in vivo in the absence of an intact nef gene. J Virol 1994;68:2031-2037.
9. Cao Y, Qin L, Zhang L, Safrit J, and Ho DD: Virologic and immunologic characterization of long-term survivors of HIV-1 infection. N Engl J Med 1995;332:201-207.
10. Premkumar DRD, Ma XZ, Maitra RK, Chakrabarti BK, Salkawitz J, Liberman B, Hirsch MS, and Kestler HW: The nef gene from a long-term HIV-1 type nonprogressor. AIDS Res Hum Retroviruses 1996;12:337-345.
11. Zazopoulos E and Haseltine WA: Disulfide bond formation in HIV-1 Nef protein. J Virol 1993;67(3):1676-1680.