SCOPUS 정보 검색 플랫폼

Combinatorial Chemistry and High Throughput Screening

Volumn 3, Issue 5, 2000, Pages 355-362

Mini-review: Computational structure-based design of inhibitors that target protein surfaces

(1) Zeng, Jun a

a ROYAL MELBOURNE HOSPITAL (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

ERYTHROPOIETIN RECEPTOR; IMMUNOGLOBULIN; LIGAND; PEPTIDE DERIVATIVE; THROMBOPOIETIN;

BINDING SITE; COMPUTER AIDED DESIGN; COMPUTER PROGRAM; DRUG DESIGN; DRUG PROTEIN BINDING; DRUG TARGETING; LIGAND BINDING; MATHEMATICAL MODEL; PRIORITY JOURNAL; PROTEIN PROTEIN INTERACTION; SHORT SURVEY;

EID: 0033774871 PISSN: 13862073 EISSN: None Source Type: Journal
DOI: 10.2174/1386207003331490 Document Type: Short Survey

Times cited : (39)

References (79)

1
- 0025871254
- (1991) Science , vol.252 , pp. 1390
- Clore, G.¹ Gronenborn, A.²

2
- 0027136282
- (1993) J. Mol. Biol. , vol.234 , pp. 779
- Sali, A.¹ Blundell, T.²

3
- 0032146301
- (1998) Curr. Opin. Biotechnol. , vol.9 , pp. 366-369
- Amzel, L.M.¹

4
- 0025123333
- (1990) J. Biol. Chem. , vol.265 , pp. 16027-16030
- Janin, J.¹ Chothia, C.²

5
- 0028297112
- (1994) J. Med. Chem. , vol.37 , pp. 1035
- Greer, J.¹ Erickson, J.² Baldwin, J.³ Varney, M.⁴

6
- 0028143534
- (1994) J. Med. Chem. , vol.37 , pp. 3889
- Hilpert, K.¹

7
- 0030044141
- (1996) J. Med. Chem. , vol.39 , pp. 388-391
- Von Itzstein, M.¹ Dyson, J.² Oliver, S.³ White, H.⁴ Wu, W.⁵ Kok, G.⁶ Pegg, M.⁷

8
- 0032526697
- (1998) Structure , vol.6 , pp. 735-746
- Varghese, J.¹ Smith, B.² Sollis, S.³ Blick, T.⁴ Sahasrahudhe, A.⁵ McKimm-Breschkin, J.⁶ Colman, P.⁷

9
- 0028916599
- (1995) Science , vol.267 , pp. 383-386
- Clackson, T.¹ Wells, J.A.²

10
- 0029798402
- (1996) Science , vol.273 , pp. 464-471
- Livnah, O.¹ Stura, E.A.² Johnson, D.L.³ Middleton, S.A.⁴ Mulcahy, L.S.⁵ Wrighton, N.C.⁶ Dower, W.J.⁷ Jolliffe, L.K.⁸ Wilson, I.A.⁹

11
- 0030773876
- (1997) Science , vol.276 , pp. 1696-1699
- Cwirla, S.E.¹ Balasubramanian, P.² Duffin, D.J.³ Wagstrom, C.R.⁴ Gates, C.M.⁵ Singer, S.C.⁶ Davis, A.M.⁷ Tansik, R.L.⁸ Matteakis, L.C.⁹ Boytos, C.M.¹⁰ Schatz, P.J.¹¹ Baccanari, D.P.¹² Wrighton, N.C.¹³ Barrett, R.W.¹⁴ Dower, W.J.¹⁵

12
- 0032479179
- (1998) J. Mol. Biol. , vol.280 , pp. 1-9
- Bogan, A.A.¹ Thorn, K.S.²

13
- 0003187567
- (1999) J. Mol. Biol. , vol.285 , pp. 2177-2198
- Conte, L.L.¹ Chothia, C.² Janin, J.³

14
- 0034625164
- (2000) PNAS , vol.97 , pp. 5050-5053
- Leung, D.K.¹ Yang, Z.² Breslow, R.³

15
- 0031418201
- (1997) Biopolymers , vol.43 , pp. 383-400
- Dalgarno, D.C.¹ Botfield, M.C.² Rickles, R.J.³

16
- 0026437577
- (1992) Nature , vol.359 , pp. 851-855
- Musacchio, A.¹ Noble, M.² Pauptit, R.³ Wierenga, R.⁴ Saraste, M.⁵

17
- 0027102571
- (1992) Science , vol.258 , pp. 1665-1668
- Yu, H.¹

18
- 0027340025
- (1993) Cell , vol.72 , pp. 945-952
- Koyama, S.¹

19
- 0027191192
- (1993) Cell , vol.73 , pp. 813-822
- Booker, G.W.¹

20
- 0027245080
- (1993) EMBO J , vol.12 , pp. 2617-2624
- Noble, M.E.¹ Musacchio, A.² Saraste, M.³ Courtneidge, S.A.⁴ Wierenga, R.K.⁵

21
- 0027537997
- (1993) Cell , vol.72 , pp. 953-960
- Kohda, D.¹

22
- 0028351794
- (1994) FEBS Lett. , vol.341 , pp. 79-85
- Borchet, T.V.¹ Mathieu, M.² Zeelen, J.P.³ Courtneidge, S.A.⁴ Wierenga, R.K.⁵

23
- 0028774541
- (1994) Structure , vol.2 , pp. 1029-1040
- Kohda, D.¹

24
- 0029782121
- (1996) Biochemistry , vol.35 , pp. 10634-10640
- Pisabarro, M.T.¹ Serrano, L.²

25
- 0021871375
- (1985) J. Med. Chem. , vol.28 , pp. 849-857
- Goodford, P.J.¹

26
- 0026813925
- (1992) Comput.-Aided Mol. Design , vol.6 , pp. 61
- Bohm, H.J.J.¹

27
- 0024149641
- (1988) Ann. Rev. Immunol. , vol.6 , pp. 381-405
- Williams, A.F.¹ Barclay, A.N.²

28
- 0000356021
- (1997) Med. Chem. Res. , vol.7 , pp. 137-150
- Huang, Z.¹ Li, S.² Korngold, R.³

29
- 0029440613
- (1995) Sem. Immunol. , vol.17 , pp. 389-398
- Schafer, P.H.¹ Pierce, S.K.² Jardetzsky, T.S.³

30
- 0027217789
- (1993) Nature , vol.364 , pp. 33-39
- Brown, J.H.¹ Jardetzsky, T.S.² Gorga, J.C.³ Stern, L.J.⁴ Urban, R.G.⁵ Strominger, J.L.⁶ Wiley, D.C.⁷

31
- 0031410504
- (1997) Biopolymers , vol.43 , pp. 367-382
- Huang, Z.¹ Li, S.² Korngold, R.³

32
- 12644256642
- (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 73-78
- Li, S.¹ Gao, J.² Satoh, T.³ Friedman, T.⁴ Edling, A.⁵ Koch, U.⁶ Choksi, S.⁷ Han, X.⁸ Korngold, R.⁹ Huang, Z.¹⁰

33
- 0030978915
- (1997) J. Biol. Chem. , vol.272 , pp. 12175-12180
- Satoh, T.¹ Aramini, J.M.² Li, S.³ Friedman, T.M.⁴ Gao, J.⁵ Edling, A.⁶ Townsend, R.⁷ Germann, M.W.⁸ Korngold, R.⁹ Huang, Z.¹⁰

34
- 0031889939
- (1998) Nature Med. , vol.4 , pp. 309
- Choksi, S.¹ Jameson, B.A.² Korngold, R.³

35
- 0031912061
- (1998) Nature Biotech. , vol.16 , pp. 190
- Li, R.¹ Dowd, V.² Stewart, D.J.³ Burton, S.J.⁴ Lowe, C.R.⁵

36
- 0002215441
- Structure-based drug design, Veerapandian, P., Ed.
- (1997) , pp. 541-558
- Caflisch, A.¹ Ehrhardt, C.²

37
- 0030960230
- (1997) J. Ann. Rev. Pharmacol. Toxicol. , vol.37 , pp. 71
- Marrone, T.¹ Briggs, J.² McCammon³

38
- 0002716825
- (1998) Curr. Opin. Drug Design Discov. , vol.1 , pp. 16
- Kubinyi, H.¹

39
- 0028036120
- (1994) J. Am. Chem. Soc. , vol.116 , pp. 5560
- Bohacek, R.S.¹ McMartin, C.²

40
- 0032929155
- (1999) Comb. Chem. High Throughput Screen. , vol.2 , pp. 91-104
- Apostolakis, J.¹ Caflisch, A.²

41
- 0030599010
- (1996) J. Mol. Biol. , vol.261 , pp. 470-489
- Rarey, M.¹ Kramer, B.² Lengauer, T.³ Klebe, G.⁴

42
- 84986467005
- (1992) J. Comput. Chem. , vol.13 , pp. 730
- Leach, A.¹ Kuntz, I.²

43
- 0007519664
- (1994) J. Comput.-Aided Mol. Design , vol.8 , pp. 582-606
- Klebe, G.¹ Mietzner, T.²

44
- 0026345685
- (1991) Proteins , vol.11 , pp. 314-328
- Moon, J.B.¹ Howe, W.J.²

45
- 0032961895
- (1998) Proteins , vol.34 , pp. 17-28
- Rarey, M.¹ Kramer, B.² Lengauer, T.³

46
- 0017411710
- (1997) J. Mol. Biol. , vol.112 , pp. 535-542
- Berstein, F.C.¹

47
- 0032738842
- (1999) Proteins , vol.37 , pp. 228-241
- Kramer, B.¹ Rarey, M.² Lengauer, T.³

48
- 0020491251
- (1982) J. Mol. Biol. , vol.161 , pp. 269
- Kuntz, I.¹ Blaney, J.² Oatley, S.³ Langridge, R.⁴ Ferrin, T.⁵

49
- 0025054246
- (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 6644-6648
- DesJarlais, R.L.¹ Seibel, G.L.² Kuntz, I.D.³ Furth, P.S.⁴ Alvarez, J.C.⁵ Ortiz de Montellano, P.R.⁶ Decamp, D.L.⁷ Babe, L.M.⁸ Craik, C.S.⁹

50
- 0027522358
- (1993) Science , vol.259 , pp. 1445
- Shoichet, B.K.¹ Stroud, R.M.² Santi, D.V.³ Kuntz, I.D.⁴ Perry, K.M.⁵

51
- 0022993246
- (1986) J. Med. Chem. , vol.29 , pp. 2149-2153
- DesJarlais, R.L.¹ Sheridan, R.P.² Dixon, J.S.³ Kuntz, I.D.⁴ Venkataraghavan, R.⁵

52
- 0029283717
- (1995) J. Comput.-Aided Mol. Design , vol.9 , pp. 113
- Oshiro, C.M.¹ Kuntz, I.D.² Dixon, J.S.³

53
- 84986432941
- (1992) J. Comput. Chem. , vol.13 , pp. 505
- Meng, E.C.¹ Shoichet, B.K.² Kuntz, I.D.³

54
- 0032196541
- (1998) J. Comput.-Aided Mol. Design , vol.12 , pp. 597
- Sun, Y.¹ Ewing, T.² Skillman, A.³ Kuntz, I.D.⁴

55
- 0003098785
- (1996) Perspect. Drug Discov. Des. , vol.3 , pp. 21-33
- Bohm, H.J.¹

56
- 0001635093
- (1979) Acta Crystallogr. , vol.35 B , pp. 2331
- Allen, F.H.¹

57
- 0028454828
- (1994) J. Comput.-Aided Mol. Design , vol.8 , pp. 243
- Bohm, H.J.¹

58
- 0040541621
- (1999) J. Comput.-Aided Mol. Des. , vol.13 , pp. 51-56
- Bohm, H.J.¹ Banner, D.W.² Weber, L.³

59
- 0002207845
- (1998) Perspect. Drug Discov. Des. , vol.9-11 , pp. 19-34
- Wade, R.¹ Ortiz, A.R.² Gago, F.³

60
- 0030255303
- (1996) J. Comput.-Aided Mol. Design , vol.10 , pp. 427-440
- Jain, A.¹

61
- 0029119320
- (1995) Protein Science , vol.4 , pp. 1881-1903
- Wallqvist, A.¹ Jernigan, R.L.² Covell, R.G.³

62
- 0028881193
- (1995) Protein Eng. , vol.8 , pp. 677-691
- Verkhivker, V.¹ Appelt, K.² Freer, S.T.³ Villafranca, J.E.⁴

63
- 0027219536
- (1993) J. Med. Chem. , vol.36 , pp. 2142
- Caflisch, A.¹ Miranker, A.² Karplus, M.³

64
- 34249753351
- (1995) Perspect. Drug Discov. Des. , vol.3 , pp. 51
- Caflisch, A.¹ Karplus, M.²

65
- 0030256270
- (1996) J. Comput-Aided Mol. Design , vol.10 , pp. 372
- Caflisch, A.¹

66
- 0030963674
- (1997) Proteins , vol.29 , pp. 32-58
- Joseph-McCarthy, D.¹ Hogle, J.² Karplus, M.³

67
- 0032999872
- (1999) Protein Eng. , vol.12 , pp. 457-468
- Zeng, J.¹ Treutlein, H.R.²

68
- 0025916872
- (1991) Proteins , vol.11 , pp. 29
- Miranker, A.¹ Karplus, M.²

69
- 0028282687
- (1994) Proteins , vol.19 , pp. 199
- Eisen, M.¹ Wiley, D.² Karplus, M.³ Hubbard, R.⁴

70
- 0033214412
- (1999) Proteins , vol.37 , pp. 88
- Majeux, N.¹ Scarsi, M.² Apostolakis, J.³ Ehrhardt, C.⁴ Caflisch, A.⁵

71
- 0001727708
- (1998) News Physiol. Sci. , vol.13 , pp. 182
- Caflisch, A.¹ Walchli, R.² Ehrhardt, C.³

72
- 0032749096
- (1999) Proteins , vol.37 , pp. 512
- Stultz, G.M.¹ Karplus, M.²

73
- 0029866641
- (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 1577-1581
- Clark, G.¹ Drugan, J.² Terrell, R.³ Bradham, C.⁴ Der, C.⁵ Bell, R.⁶ Campbell, S.⁷

74
- 0007558978
- (2000)
- Zeng, J.¹ Vuong-Nhen, T.² Zortzet, A.³ Catimel, B.⁴ Nice, E.⁵ Maruta, H.⁶ Burgess, A.W.⁷ Treutlein, H.R.⁸

75
- 0012227656
- (1996) J. Phys. Chem. , vol.100 , pp. 1578-1599
- Schaefer, M.¹ Karplus, M.²

76
- 0001444020
- (1999) J. Comput. Chem. , vol.20 , pp. 322-335
- Wagner, F.¹ Simonson, T.²

77
- 0007483742
- (2000)
- Zeng, J.¹ Rudy, G.B.² Treutlein, H.R.³

78
- 0029965861
- (1996) J. Med. Chem. , vol.39 , pp. 1651-1663
- Pearlman, D.¹ Murcko, M.²

79
- 0031058541
- (1997) Biophysical J. , vol.72 , pp. 1047
- Gilson, M.¹ Given, G.² Bush, B.³ McCammon, J.⁴

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.